Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005263g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.0e-59 231.5 140 100.0
Nitab4.5_0003033g0070 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.8e-36 155.6 182 52.2
Nitab4.5_0008354g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.0e-34 149.4 182 51.1
Nitab4.5_0002497g0050 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.4e-34 148.7 162 56.2
Nitab4.5_0005900g0130 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.4e-34 148.7 182 52.2
Nitab4.5_0002459g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 5.8e-34 147.9 182 51.1
Nitab4.5_0004436g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 7.6e-34 147.5 182 50.5
Nitab4.5_0002315g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.2e-33 146.0 182 51.1
Nitab4.5_0004308g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.2e-33 146.0 182 50.5
Nitab4.5_0000566g0030 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.8e-33 145.2 182 51.1
Nitab4.5_0006716g0010 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.5e-31 138.7 186 49.5
Nitab4.5_0010096g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.5e-31 138.7 182 50.0
Nitab4.5_0000471g0160 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.0e-30 137.1 137 61.3
Nitab4.5_0008587g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.0e-30 137.1 172 49.4
Nitab4.5_0000884g0110 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.8e-30 136.3 143 55.9
Nitab4.5_0005249g0080 Nicotiana tabacum HOM05D005877 ORTHO05D011670 5.6e-29 131.3 142 54.9
Nitab4.5_0008885g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 5.6e-29 131.3 170 62.4
Nitab4.5_0007629g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.0e-27 125.2 163 48.5
Nitab4.5_0008423g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 7.6e-26 120.9 152 49.3
Nitab4.5_0010313g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 8.4e-25 117.5 156 48.1
Nitab4.5_0001329g0160 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.2e-24 115.2 63 87.3
Nitab4.5_0002650g0120 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.2e-23 113.6 106 60.4
Nitab4.5_0014640g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.2e-23 113.6 161 55.3
Nitab4.5_0022061g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.6e-21 104.0 63 81.0
Nitab4.5_0001165g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.7e-20 102.1 132 47.0
Nitab4.5_0006720g0050 Nicotiana tabacum HOM05D005877 ORTHO05D011670 6.2e-20 101.3 149 47.0
Nitab4.5_0007689g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 4.0e-19 98.6 63 77.8
Nitab4.5_0005924g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.4e-18 95.5 182 40.7
Nitab4.5_0007565g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.3e-14 83.6 132 45.5
Nitab4.5_0005376g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.0e-14 82.4 154 41.6
Nitab4.5_0019772g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.9e-13 79.7 145 42.1
Nitab4.5_0010812g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 5.7e-13 78.2 142 38.7
Nitab4.5_0003022g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.4e-11 73.6 42 81.0
Nitab4.5_0003117g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.8e-11 73.2 55 65.5
Nitab4.5_0003240g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.8e-11 73.2 135 46.7
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 6.9e-11 71.2 63 54.0
Nitab4.5_0001173g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-10 70.5 70 48.6
Nitab4.5_0011007g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.0e-10 69.7 39 82.1
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 2.0e-10 69.7 63 52.4
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 2.0e-10 69.7 63 52.4
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-10 69.3 62 54.8
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-10 69.3 63 52.4
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-10 69.3 63 54.0
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.4e-10 68.9 63 54.0
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 3.4e-10 68.9 63 52.4
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.9e-10 68.2 63 52.4
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.6e-10 67.8 63 52.4
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.6e-10 67.8 63 50.8
Nitab4.5_0011961g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-09 67.4 63 52.4
Nitab4.5_0018926g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.0e-09 67.4 39 79.5
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-09 67.0 63 52.4
Nitab4.5_0003581g0050 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.2e-09 66.2 104 44.2
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.2e-09 66.2 63 52.4
Nitab4.5_0001896g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.0e-09 65.1 63 50.8
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.0e-09 65.1 63 49.2
Nitab4.5_0004295g0030 Nicotiana tabacum HOM05D005877 ORTHO05D000482 6.5e-09 64.7 99 46.5
Nitab4.5_0000759g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.2e-08 62.4 84 44.0
Nitab4.5_0001047g0110 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.2e-08 62.4 63 47.6
Nitab4.5_0011007g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 3.2e-08 62.4 63 84.1
Nitab4.5_0012573g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.2e-08 62.4 37 78.4
Nitab4.5_0000036g0380 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.2e-08 62.0 63 49.2
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.2e-08 62.0 63 47.6
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.2e-08 62.0 63 47.6
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.5e-08 61.6 63 49.2
Nitab4.5_0009150g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.2e-08 61.2 54 53.7
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.3e-08 60.8 54 53.7
Nitab4.5_0007137g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.3e-08 60.8 63 49.2
Nitab4.5_0000073g0470 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.2e-07 60.5 54 50.0
Nitab4.5_0007528g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.2e-07 60.5 54 51.9
Nitab4.5_0004979g0160 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.6e-07 60.1 54 46.3
Nitab4.5_0005271g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.6e-07 60.1 98 45.9
CANSAT25G2067 Cannabis sativa HOM05D002262 ORTHO05D000482 2.1e-07 59.7 63 46.0
Nitab4.5_0000699g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.1e-07 59.7 54 53.7
Nitab4.5_0004809g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.1e-07 59.7 60 48.3
Nitab4.5_0006450g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.1e-07 59.7 60 48.3
CANSAT11G0751 Cannabis sativa HOM05D008636 ORTHO05D000482 2.7e-07 59.3 63 46.0
CANSAT80G0150 Cannabis sativa HOM05D002262 ORTHO05D000482 2.7e-07 59.3 63 46.0
Nitab4.5_0001730g0140 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.6e-07 58.5 63 47.6
Nitab4.5_0000228g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.1e-07 58.2 55 54.5
Nitab4.5_0000586g0100 Nicotiana tabacum HOM05D006812 ORTHO05D000482 6.1e-07 58.2 53 50.9
Nitab4.5_0003525g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.1e-07 58.2 63 44.4
Nitab4.5_0009593g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.1e-07 58.2 62 45.2
Nitab4.5_0014929g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.1e-07 58.2 62 45.2
Nitab4.5_0000647g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.9e-07 57.8 60 43.3
Nitab4.5_0001708g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.9e-07 57.8 54 53.7
Nitab4.5_0007251g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 7.9e-07 57.8 75 52.0
Nitab4.5_0003373g0090 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.0e-06 57.4 92 60.9
Nitab4.5_0005705g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.0e-06 57.4 63 47.6
Nitab4.5_0007005g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.0e-06 57.4 120 38.3
Nitab4.5_0007035g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.0e-06 57.4 118 39.0
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 1.0e-06 57.4 63 42.9
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.3e-06 57.0 53 50.9
Nitab4.5_0009415g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-06 57.0 62 43.5
Nitab4.5_0000617g0070 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.3e-06 56.2 54 50.0
Nitab4.5_0000912g0090 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.3e-06 56.2 52 51.9
Nitab4.5_0001724g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.0e-06 55.8 57 43.9
Nitab4.5_0002002g0120 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.0e-06 55.8 54 50.0
Nitab4.5_0005260g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.0e-06 55.8 54 46.3
Nitab4.5_0010116g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.0e-06 55.8 54 48.1
Nitab4.5_0000476g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.1e-06 55.1 54 44.4
Nitab4.5_0008153g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.1e-06 55.1 71 42.3
Nitab4.5_0013206g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.1e-06 55.1 75 37.3
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 5.1e-06 55.1 63 41.3
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 5.1e-06 55.1 63 41.3
Nitab4.5_0001024g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.7e-06 54.7 56 48.2
Solyc10g150130.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 6.7e-06 54.7 53 49.1
Solyc11g061985.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 6.7e-06 54.7 53 49.1
Nitab4.5_0000516g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 8.7e-06 54.3 57 45.6
Nitab4.5_0001115g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000482 8.7e-06 54.3 72 41.7
Nitab4.5_0003852g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 8.7e-06 54.3 75 40.0
Nitab4.5_0003869g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.7e-06 54.3 65 44.6
Nitab4.5_0004712g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.7e-06 54.3 97 41.2
Nitab4.5_0009940g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.7e-06 54.3 56 46.4


User provided reference genes

Program Settings