Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005249g0040 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.8e-53 212.2 102 100.0
Nitab4.5_0003726g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 9.1e-45 183.3 102 90.2
Nitab4.5_0000381g0090 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.5e-42 175.3 102 84.3
Nitab4.5_0001401g0010 Nicotiana tabacum HOM05D000301 ORTHO05D010895 4.2e-42 174.5 102 84.3
Nitab4.5_0003726g0020 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.5e-39 166.0 102 80.4
Nitab4.5_0002097g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.6e-39 165.2 102 80.4
CAN.G322.39 Capsicum annuum HOM05D000301 ORTHO05D010895 5.0e-35 151.0 99 71.7
PGSC0003DMG400025824 Solanum tuberosum HOM05D000301 ORTHO05D010895 8.0e-33 143.7 102 67.6
Solyc01g108640.1 Solanum lycopersicum HOM05D000301 ORTHO05D010895 3.0e-32 141.7 102 67.6
Sopen01g050860 Solanum pennellii HOM05D000301 ORTHO05D010895 3.0e-32 141.7 102 67.6
CAN.G1041.17 Capsicum annuum HOM05D000301 ORTHO05D010895 2.5e-26 122.1 85 71.8
Nitab4.5_0001907g0060 Nicotiana tabacum HOM05D000301 ORTHO05D010895 3.3e-26 121.7 101 59.4
Nitab4.5_0002251g0090 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.8e-24 115.9 101 56.4
Nitab4.5_0004940g0070 Nicotiana tabacum HOM05D000301 ORTHO05D010895 6.8e-24 114.0 100 53.0
Nitab4.5_0005606g0020 Nicotiana tabacum HOM05D000301 ORTHO05D010895 6.8e-24 114.0 100 53.0
Nitab4.5_0005606g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.7e-22 109.4 83 55.4
Peaxi162Scf00537g00054 Petunia axillaris HOM05D000301 ORTHO05D010895 3.1e-21 105.1 92 56.5
Peaxi162Scf00104g00052 Petunia axillaris HOM05D000301 ORTHO05D010895 8.6e-19 97.1 99 51.5
Peaxi162Scf00104g00061 Petunia axillaris HOM05D000301 ORTHO05D010895 8.6e-19 97.1 99 51.5
Peaxi162Scf00751g00066 Petunia axillaris HOM05D000301 ORTHO05D010895 8.6e-19 97.1 99 51.5
Peaxi162Scf01028g00001 Petunia axillaris HOM05D000301 ORTHO05D010895 8.6e-19 97.1 99 51.5
Peaxi162Scf01028g00002 Petunia axillaris HOM05D000301 ORTHO05D010895 8.6e-19 97.1 99 51.5
Peaxi162Scf01077g00001 Petunia axillaris HOM05D000301 ORTHO05D010895 8.6e-19 97.1 99 51.5
Peaxi162Scf00104g00071 Petunia axillaris HOM05D000301 ORTHO05D010895 8.0e-17 90.5 99 49.5
Hma1.2p1_0885F.1_g232640 Hydrangea macrophylla HOM05D000301 ORTHO05D010895 1.5e-15 86.3 70 57.1
Actinidia17857 Actinidia chinensis HOM05D000301 ORTHO05D010895 2.2e-14 82.4 69 52.2
Actinidia17858 Actinidia chinensis HOM05D000301 ORTHO05D010895 2.2e-14 82.4 69 52.2
Nitab4.5_0013616g0020 Nicotiana tabacum HOM05D000301 ORTHO05D010895 3.7e-14 81.6 77 53.2
Peaxi162Scf00564g00057 Petunia axillaris HOM05D000301 ORTHO05D010895 3.7e-14 81.6 66 57.6
TAR629G2345 Trochodendron aralioides HOM05D000301 ORTHO05D000303 6.4e-14 80.9 69 53.6
Dinv04309 Davidia involucrata HOM05D000301 ORTHO05D010895 1.4e-13 79.7 66 54.5
TAR633G2630 Trochodendron aralioides HOM05D000301 ORTHO05D000303 5.4e-13 77.8 69 52.2
Nitab4.5_0001401g0020 Nicotiana tabacum HOM05D004900 ORTHO05D006392 1.2e-12 76.6 56 67.9
TAR633G1152 Trochodendron aralioides HOM05D000301 ORTHO05D000303 7.8e-12 73.9 69 50.7
Rhsim05G0087500 Rhododendron simsii HOM05D000301 ORTHO05D010895 5.0e-11 71.2 68 44.1
Nitab4.5_0003621g0020 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.8e-09 65.5 79 43.0
Nitab4.5_0009023g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 3.1e-08 62.0 41 70.7
Atru.chr11.2185 Acer truncatum HOM05D000301 ORTHO05D003629 1.2e-07 60.1 62 41.9
Hund18524 Selenicereus undatus HOM05D000301 ORTHO05D000303 1.2e-07 60.1 53 49.1
Rhsim05G0082000 Rhododendron simsii HOM05D000301 ORTHO05D010895 1.5e-07 59.7 56 42.9
Hund18527 Selenicereus undatus HOM05D000301 ORTHO05D000303 1.5e-07 59.7 53 49.1
Cfa009278 Carpinus fangiana HOM05D000301 ORTHO05D003629 2.6e-07 58.9 57 38.6
Duzib187G1425 Durio zibethinus HOM05D000301 ORTHO05D003629 4.4e-07 58.2 73 38.4
Haze_12311 Corylus avellana HOM05D000301 ORTHO05D003629 5.8e-07 57.8 57 38.6
MBI05_g02645_MAGBIO Magnolia biondii HOM05D000301 ORTHO05D000303 1.7e-06 56.2 56 44.6
arahy.Tifrunner.gnm1.ann1.EN97M4 Arachis hypogaea HOM05D000301 ORTHO05D000303 2.2e-06 55.8 46 45.7
arahy.Tifrunner.gnm1.ann1.ADQ5P4 Arachis hypogaea HOM05D000301 ORTHO05D000303 2.9e-06 55.5 46 45.7
Nitab4.5_0003227g0020 Nicotiana tabacum HOM05D000301 ORTHO05D000303 3.7e-06 55.1 64 43.8
Solyc01g099050.3 Solanum lycopersicum HOM05D000301 ORTHO05D000303 3.7e-06 55.1 50 40.0
CDE09G1088 Ceratophyllum demersum HOM05D000301 ORTHO05D003629 4.9e-06 54.7 64 37.5
vmacro17482 Vaccinium macrocarpon HOM05D000301 ORTHO05D000303 4.9e-06 54.7 56 39.3
VMungo0540G0439 Vigna mungo HOM05D000301 ORTHO05D000303 4.9e-06 54.7 64 40.6
MBI05_g44755_MAGBIO Magnolia biondii HOM05D000301 ORTHO05D000303 6.4e-06 54.3 56 42.9
Potri.001G463900 Populus trichocarpa HOM05D000301 ORTHO05D000303 6.4e-06 54.3 58 41.4
SGA_v2.0_scaffold37G14694 Striga asiatica HOM05D000301 ORTHO05D000303 6.4e-06 54.3 54 42.6
Aqoxy5G03203 Aquilegia oxysepala HOM05D000301 ORTHO05D000303 8.3e-06 53.9 56 39.3
CDE02G0530 Ceratophyllum demersum HOM05D000301 ORTHO05D003629 8.3e-06 53.9 66 39.4
Nitab4.5_0003099g0080 Nicotiana tabacum HOM05D000273 ORTHO05D000198 8.3e-06 53.9 63 36.5
Peaxi162Scf00159g00137 Petunia axillaris HOM05D000301 ORTHO05D000303 8.3e-06 53.9 56 37.5
Sopen01g042620 Solanum pennellii HOM05D000301 ORTHO05D000303 8.3e-06 53.9 49 40.8
TPR.G37527 Trifolium pratense HOM05D000301 ORTHO05D003629 8.3e-06 53.9 60 38.3
VMungo0540G1946 Vigna mungo HOM05D000301 ORTHO05D000303 8.3e-06 53.9 46 45.7


User provided reference genes

Program Settings