Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005235g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 3.0e-69 265.0 129 100.0
CAN.G407.94 Capsicum annuum HOM05D004884 ORTHO05D005873 1.0e-40 170.2 119 69.7
Prupe.3G084300 Prunus persica HOM05D004884 ORTHO05D005873 1.3e-40 169.9 119 70.6
Solyc03g116600.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 2.2e-40 169.1 119 69.7
Sopen03g035510 Solanum pennellii HOM05D004884 ORTHO05D005873 2.2e-40 169.1 119 69.7
MD17G1208900 Malus domestica HOM05D004884 ORTHO05D005873 2.9e-40 168.7 119 69.7
Solyc06g068080.4 Solanum lycopersicum HOM05D004884 ORTHO05D005873 2.9e-40 168.7 119 70.6
Sopen06g025360 Solanum pennellii HOM05D004884 ORTHO05D005873 2.9e-40 168.7 119 70.6
PGSC0003DMG400028511 Solanum tuberosum HOM05D004884 ORTHO05D005873 2.9e-40 168.7 119 70.6
Hma1.2p1_0515F.1_g170110 Hydrangea macrophylla HOM05D004884 ORTHO05D005873 6.5e-40 167.5 119 68.9
Eucgr.F02527 Eucalyptus grandis HOM05D004884 ORTHO05D005873 8.5e-40 167.2 119 68.9
FvH4_6g29940 Fragaria vesca HOM05D004884 ORTHO05D005873 8.5e-40 167.2 119 70.6
FAN05G0038 Fragaria x ananassa HOM05D004884 ORTHO05D005873 8.5e-40 167.2 119 70.6
FAN09G2574 Fragaria x ananassa HOM05D004884 ORTHO05D005873 8.5e-40 167.2 119 70.6
FAN14G1538 Fragaria x ananassa HOM05D004884 ORTHO05D005873 8.5e-40 167.2 119 70.6
QL05p029075 Quercus lobata HOM05D004884 ORTHO05D005873 8.5e-40 167.2 119 68.1
RcHm_v2.0_Chr2g0135941 Rosa chinensis HOM05D004884 ORTHO05D005873 8.5e-40 167.2 119 68.1
PGSC0003DMG400000635 Solanum tuberosum HOM05D004884 ORTHO05D005873 8.5e-40 167.2 119 68.9
Rhsim10G0061400 Rhododendron simsii HOM05D004884 ORTHO05D005873 1.1e-39 166.8 119 68.9
Peaxi162Scf00207g00728 Petunia axillaris HOM05D004884 ORTHO05D005873 1.5e-39 166.4 119 70.6
Actinidia36285 Actinidia chinensis HOM05D004884 ORTHO05D005873 1.9e-39 166.0 122 66.4
arahy.Tifrunner.gnm1.ann1.Q10AU9 Arachis hypogaea HOM05D004884 ORTHO05D005873 1.9e-39 166.0 119 68.1
arahy.Tifrunner.gnm1.ann1.W4DERE Arachis hypogaea HOM05D004884 ORTHO05D005873 1.9e-39 166.0 119 68.1
Dinv30589 Davidia involucrata HOM05D004884 ORTHO05D005873 1.9e-39 166.0 119 67.2
Glyma.08G211500 Glycine max HOM05D004884 ORTHO05D005873 1.9e-39 166.0 119 68.1
Lj3g0000080 Lotus japonicus HOM05D004884 ORTHO05D005873 1.9e-39 166.0 119 67.2
PGR031G3479 Punica granatum HOM05D004884 ORTHO05D005873 1.9e-39 166.0 119 68.1
VMungo0331G0880 Vigna mungo HOM05D004884 ORTHO05D005873 1.9e-39 166.0 119 68.1
ECA240G3509 Erigeron canadensis HOM05D004884 ORTHO05D005873 2.5e-39 165.6 119 68.1
Lalb_Chr04g0262431 Lupinus albus HOM05D004884 ORTHO05D005873 2.5e-39 165.6 119 67.2
Dinv38109 Davidia involucrata HOM05D000250 ORTHO05D002477 4.2e-39 164.9 122 65.6
Phvul.010G154800 Phaseolus vulgaris HOM05D004884 ORTHO05D005873 4.2e-39 164.9 119 67.2
FAN02G1988 Fragaria x ananassa HOM05D004884 ORTHO05D005873 5.5e-39 164.5 119 69.7
Glyma.15G008700 Glycine max HOM05D004884 ORTHO05D005873 5.5e-39 164.5 119 67.2
Lsat_1_v5_gn_1_2440 Lactuca sativa HOM05D004884 ORTHO05D005873 5.5e-39 164.5 119 67.2
Nitab4.5_0001764g0110 Nicotiana tabacum HOM05D004884 ORTHO05D005873 5.5e-39 164.5 119 68.9
Nitab4.5_0013106g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 5.5e-39 164.5 119 68.9
CSS0003587 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 7.2e-39 164.1 119 67.2
vmacro20098 Vaccinium macrocarpon HOM05D004884 ORTHO05D005873 7.2e-39 164.1 119 68.9
GSVIVG01017313001 Vitis vinifera HOM05D004884 ORTHO05D005873 7.2e-39 164.1 119 67.2
SalBow3G1656 Salvia bowleyana HOM05D004884 ORTHO05D005873 9.4e-39 163.7 119 69.7
Actinidia18100 Actinidia chinensis HOM05D004884 ORTHO05D005873 1.2e-38 163.3 119 66.4
MSTRG.9432 Avicennia marina HOM05D004884 ORTHO05D005873 1.2e-38 163.3 119 68.1
Psat5g301920 Pisum sativum HOM05D004884 ORTHO05D005873 1.2e-38 163.3 119 66.4
THA.LOC104808231 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 1.2e-38 163.3 119 66.4
ECA247G2927 Erigeron canadensis HOM05D001354 ORTHO05D002582 1.6e-38 162.9 119 67.2
SGA_v2.0_scaffold117G32369 Striga asiatica HOM05D004884 ORTHO05D005873 1.6e-38 162.9 119 68.9
Migut.D01065 Erythranthe guttata HOM05D004884 ORTHO05D005873 2.1e-38 162.5 119 68.1
HanXRQChr02g0046821 Helianthus annuus HOM05D004884 ORTHO05D005873 2.1e-38 162.5 119 66.4
Medtr2g103690 Medicago truncatula HOM05D004884 ORTHO05D005873 2.1e-38 162.5 119 67.2
Glyma.07G031300 Glycine max HOM05D004884 ORTHO05D005873 2.7e-38 162.2 119 67.2
Oeu052257.1 Olea europaea HOM05D004884 ORTHO05D005873 2.7e-38 162.2 119 67.2
Lalb_Chr22g0350881 Lupinus albus HOM05D004884 ORTHO05D005873 3.6e-38 161.8 119 65.5
Oeu045160.1 Olea europaea HOM05D004884 ORTHO05D005873 3.6e-38 161.8 119 67.2
THA.LOC104812503 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 3.6e-38 161.8 119 63.9
unitig_747.g21296 Utricularia gibba HOM05D004884 ORTHO05D005873 3.6e-38 161.8 119 65.5
Cc04_g04240 Coffea canephora HOM05D004884 ORTHO05D005873 4.7e-38 161.4 119 68.1
Aa31LG4G430 Aethionema arabicum HOM05D004884 ORTHO05D005873 6.1e-38 161.0 119 63.9
EL10Ac2g04219 Beta vulgaris HOM05D004884 ORTHO05D005873 6.1e-38 161.0 119 66.4
CARHR015900 Cardamine hirsuta HOM05D004884 ORTHO05D005873 1.4e-37 159.8 119 63.0
CiPaw.08G011500 Carya illinoinensis HOM05D004884 ORTHO05D005873 1.4e-37 159.8 119 65.5
Manes.04G114100 Manihot esculenta HOM05D004884 ORTHO05D005873 1.4e-37 159.8 119 66.4
Duzib235G0621 Durio zibethinus HOM05D004884 ORTHO05D005873 1.8e-37 159.5 119 66.4
SalBow6G6988 Salvia bowleyana HOM05D004884 ORTHO05D005873 1.8e-37 159.5 118 69.5
Thecc.06G021400 Theobroma cacao HOM05D004884 ORTHO05D005873 2.3e-37 159.1 119 65.5
AL1G27470 Arabidopsis lyrata HOM05D004884 ORTHO05D005873 3.0e-37 158.7 119 62.2
AT1G15370 Arabidopsis thaliana HOM05D004884 ORTHO05D005873 3.0e-37 158.7 119 62.2
COL.COLO4_12946 Corchorus olitorius HOM05D004884 ORTHO05D005873 3.0e-37 158.7 119 64.7
Potri.001G193100 Populus trichocarpa HOM05D004884 ORTHO05D005873 3.0e-37 158.7 119 64.7
Sabra01G0135700 Salix brachista HOM05D004884 ORTHO05D005873 3.0e-37 158.7 119 64.7
Sc23g0006790 Simmondsia chinensis HOM05D004884 ORTHO05D005873 3.0e-37 158.7 128 60.9
Sp1g13700 Schrenkiella parvula HOM05D004884 ORTHO05D005873 4.0e-37 158.3 117 64.1
BcaB03g14545 Brassica carinata HOM05D004884 ORTHO05D005873 5.2e-37 157.9 117 64.1
BcaC05g25475 Brassica carinata HOM05D004884 ORTHO05D005873 5.2e-37 157.9 117 64.1
BcaC05g25490 Brassica carinata HOM05D004884 ORTHO05D005873 5.2e-37 157.9 117 64.1
A06p11400 Brassica napus HOM05D004884 ORTHO05D005873 5.2e-37 157.9 117 64.1
A09p61460 Brassica napus HOM05D004884 ORTHO05D005873 5.2e-37 157.9 117 64.1
C05p13510 Brassica napus HOM05D004884 ORTHO05D005873 5.2e-37 157.9 117 64.1
C08p45030 Brassica napus HOM05D004884 ORTHO05D005873 5.2e-37 157.9 117 64.1
BolC5t30088H Brassica oleracea HOM05D004884 ORTHO05D005873 5.2e-37 157.9 117 64.1
BraA06t24317Z Brassica rapa HOM05D004884 ORTHO05D005873 5.2e-37 157.9 117 64.1
BraA09t41517Z Brassica rapa HOM05D004884 ORTHO05D005873 5.2e-37 157.9 117 64.1
Thhalv10009024m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 5.2e-37 157.9 117 64.1
Aqoxy1G02408 Aquilegia oxysepala HOM05D004884 ORTHO05D005873 6.8e-37 157.5 119 64.7
Carub.0001s1514 Capsella rubella HOM05D004884 ORTHO05D005873 6.8e-37 157.5 119 61.3
BcaC07g41506 Brassica carinata HOM05D004884 ORTHO05D005873 2.0e-36 156.0 117 63.2
BolC8t52049H Brassica oleracea HOM05D004884 ORTHO05D005873 2.0e-36 156.0 117 63.2
Thhalv10019295m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 2.0e-36 156.0 125 61.6
PSO455G0277 Papaver somniferum HOM05D004884 ORTHO05D005873 2.0e-36 156.0 119 64.7
QL02p021869 Quercus lobata HOM05D004884 ORTHO05D005873 2.0e-36 156.0 119 63.9
CSS0011163 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 2.6e-36 155.6 119 63.0
Nn2g12037 Nelumbo nucifera HOM05D004884 ORTHO05D005873 2.6e-36 155.6 119 63.9
Atru.chr1.2995 Acer truncatum HOM05D004884 ORTHO05D005873 3.4e-36 155.2 119 64.7
Ciclev10026708m.g Citrus clementina HOM05D004884 ORTHO05D005873 3.4e-36 155.2 119 64.7
TWI75G0638 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 3.4e-36 155.2 119 63.0
Cfa013154 Carpinus fangiana HOM05D004884 ORTHO05D005873 7.5e-36 154.1 119 63.0
Gohir.D10G076700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 7.5e-36 154.1 119 63.9
MBI04_g07835_MAGBIO Magnolia biondii HOM05D004884 ORTHO05D005873 7.5e-36 154.1 119 63.9
ClCG05G016940 Citrullus lanatus HOM05D004884 ORTHO05D005873 9.8e-36 153.7 119 63.0
MELO3C003694.2 Cucumis melo HOM05D004884 ORTHO05D005873 9.8e-36 153.7 119 63.0
Gorai.011G082800 Gossypium raimondii HOM05D004884 ORTHO05D005873 1.7e-35 152.9 119 63.0
CsaV3_3G046450 Cucumis sativus L. HOM05D004884 ORTHO05D005873 2.2e-35 152.5 119 62.2
Solyc11g008330.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 2.2e-35 152.5 119 62.2
Sed0027624 Sechium edule HOM05D004884 ORTHO05D005873 2.8e-35 152.1 119 62.2
Gohir.A10G074700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.7e-35 151.8 119 63.0
PSO170G2441 Papaver somniferum HOM05D004884 ORTHO05D005873 4.8e-35 151.4 119 62.2
TAR636G0424 Trochodendron aralioides HOM05D004884 ORTHO05D005873 8.3e-35 150.6 119 60.5
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 1.4e-34 149.8 119 61.3
ATR1120G077 Amborella trichopoda HOM05D004884 ORTHO05D005873 1.8e-34 149.4 119 59.7
AUR62012381 Chenopodium quinoa HOM05D004884 ORTHO05D005873 1.8e-34 149.4 119 61.3
Peaxi162Scf00145g01210 Petunia axillaris HOM05D004884 ORTHO05D005873 2.4e-34 149.1 119 59.7
Sed0022166 Sechium edule HOM05D004884 ORTHO05D005873 4.1e-34 148.3 119 59.7
Sabra06G0198100 Salix brachista HOM05D004884 ORTHO05D005873 1.2e-33 146.7 127 54.3
Zm00001eb064920 Zea mays HOM05D004884 ORTHO05D005873 1.2e-33 146.7 119 60.5
CAN.G321.60 Capsicum annuum HOM05D004884 ORTHO05D005873 4.5e-33 144.8 118 61.0
Nitab4.5_0006187g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 5.9e-33 144.4 118 60.2
Peaxi162Scf00332g00767 Petunia axillaris HOM05D004884 ORTHO05D005873 1.0e-32 143.7 119 63.0
Gohir.D06G099800 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.1e-31 140.2 119 56.3
Gorai.010G114700 Gossypium raimondii HOM05D004884 ORTHO05D005873 2.5e-31 139.0 119 55.5
TWI34G0752 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 7.2e-31 137.5 119 52.9
QL05p029040 Quercus lobata HOM05D004884 ORTHO05D005873 8.8e-29 130.6 119 57.1
SMO143G0054 Selaginella moellendorffii HOM05D004884 ORTHO05D005873 2.6e-28 129.0 118 54.2
CDE06G1547 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 4.4e-28 128.3 112 58.0
AUR62031521 Chenopodium quinoa HOM05D004884 ORTHO05D005873 1.3e-27 126.7 169 43.2
EL10Ac9g22900 Beta vulgaris HOM05D004884 ORTHO05D005873 2.2e-27 125.9 119 52.1
Potri.006G253700 Populus trichocarpa HOM05D004884 ORTHO05D005873 2.8e-27 125.6 114 51.8
AUR62012868 Chenopodium quinoa HOM05D004884 ORTHO05D005873 8.3e-27 124.0 119 51.3
Pp3c18_11860 Physcomitrium patens HOM05D004884 ORTHO05D005873 2.0e-25 119.4 118 48.3
AagrBONN_evm.TU.Sc2ySwM_368.2705 Anthoceros agrestis HOM05D004884 ORTHO05D005873 1.5e-23 113.2 120 47.5
Mapoly0005s0226 Marchantia polymorpha HOM05D004884 ORTHO05D005873 2.5e-23 112.5 118 44.9
Haze_21525 Corylus avellana HOM05D004884 ORTHO05D005873 2.6e-20 102.4 100 56.0
Nitab4.5_0001450g0150 Nicotiana tabacum HOM05D004884 ORTHO05D005873 2.6e-20 102.4 109 49.5
BcaC07g41508 Brassica carinata HOM05D004884 ORTHO05D005873 4.4e-20 101.7 111 50.5
Sopen11g004140 Solanum pennellii HOM05D004884 ORTHO05D005873 4.4e-20 101.7 102 51.0
Oeu024660.1 Olea europaea HOM05D004884 ORTHO05D005873 3.7e-19 98.6 55 80.0
Gohir.D07G161600 Gossypium hirsutum HOM05D004884 ORTHO05D005873 8.3e-19 97.4 95 52.6
Gorai.001G184900 Gossypium raimondii HOM05D004884 ORTHO05D005873 8.3e-19 97.4 95 52.6
Nitab4.5_0000620g0040 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.2e-17 93.6 57 78.9
CBR_g8585 Chara braunii HOM05D004884 ORTHO05D005873 1.0e-16 90.5 118 42.4
Gorai.013G087100 Gossypium raimondii HOM05D004884 ORTHO05D005873 1.7e-16 89.7 86 53.5
Gohir.D13G076450 Gossypium hirsutum HOM05D004884 ORTHO05D005873 9.5e-15 84.0 82 52.4
Gohir.A13G076901 Gossypium hirsutum HOM05D004884 ORTHO05D005873 4.7e-14 81.6 94 47.9
Gohir.A06G098210 Gossypium hirsutum HOM05D004884 ORTHO05D005873 8.0e-14 80.9 86 51.2
Gohir.D01G156500 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.2e-10 68.9 44 68.2
DCAR_015322 Daucus carota HOM05D004884 ORTHO05D005873 2.5e-07 59.3 31 77.4


User provided reference genes

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