Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 4.7e-147 524.6 286 100.0
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 5.9e-142 507.7 286 97.6
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 7.5e-121 437.6 287 86.1
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 2.9e-120 435.6 292 84.9
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 3.5e-118 428.7 292 84.6
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 7.5e-105 384.4 286 78.3
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 9.8e-105 384.0 282 78.4
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 5.8e-81 305.1 290 64.1
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 1.2e-78 297.4 287 60.3
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 1.6e-78 297.0 289 61.6
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 1.7e-77 293.5 290 61.0
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 1.1e-74 284.3 287 62.0
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 2.6e-73 279.6 294 58.2
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 3.4e-73 279.3 236 68.2
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 9.9e-73 277.7 288 58.3
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 1.3e-72 277.3 288 60.1
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 1.7e-72 276.9 288 59.4
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 2.9e-72 276.2 277 61.4
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 1.9e-71 273.5 296 56.4
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 5.5e-71 271.9 250 65.2
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 9.3e-71 271.2 293 56.0
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 3.5e-70 269.2 315 55.2
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 6.0e-70 268.5 301 57.8
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 1.3e-69 267.3 288 56.2
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 1.8e-69 266.9 275 58.2
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 5.1e-69 265.4 278 56.5
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 8.7e-69 264.6 277 58.8
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 4.3e-68 262.3 276 60.1
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 4.3e-68 262.3 275 59.6
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 5.6e-68 261.9 276 58.7
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 7.4e-68 261.5 296 55.7
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 7.4e-68 261.5 287 58.2
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 9.6e-68 261.2 269 58.4
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 1.6e-67 260.4 277 57.8
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 2.1e-67 260.0 288 57.6
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 6.2e-67 258.5 189 75.1
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 1.8e-66 256.9 290 56.9
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 4.0e-66 255.8 188 77.1
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 6.9e-66 255.0 245 61.2
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 6.9e-66 255.0 278 56.5
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.2e-65 254.2 250 60.4
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.5e-65 253.8 264 58.3
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 2.6e-65 253.1 292 55.1
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 3.4e-65 252.7 276 56.5
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 3.4e-65 252.7 264 58.0
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 3.4e-65 252.7 264 58.0
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 1.3e-64 250.8 286 54.9
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 1.7e-64 250.4 193 71.5
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 2.9e-64 249.6 253 57.7
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 3.8e-64 249.2 288 55.2
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 4.9e-64 248.8 296 55.7
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 4.9e-64 248.8 296 56.1
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 8.4e-64 248.1 278 56.1
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.4e-63 247.3 299 56.2
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 3.2e-63 246.1 242 59.1
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 4.2e-63 245.7 282 55.3
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 5.5e-63 245.4 272 57.4
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 1.2e-62 244.2 283 55.1
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 3.5e-62 242.7 268 54.9
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 2.3e-61 240.0 212 68.4
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 3.9e-61 239.2 271 55.7
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 1.9e-60 236.9 218 61.9
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 1.9e-60 236.9 248 60.9
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 7.4e-60 235.0 229 57.6
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 7.4e-60 235.0 294 54.4
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 2.1e-59 233.4 264 54.5
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 3.7e-59 232.6 283 51.9
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.8e-58 230.3 268 52.6
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 1.8e-58 230.3 298 51.0
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 2.4e-58 229.9 280 51.1
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 9.0e-58 228.0 277 55.2
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 1.5e-57 227.3 207 63.8
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 2.0e-57 226.9 221 61.5
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 3.4e-57 226.1 280 52.1
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 3.4e-57 226.1 265 54.3
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 2.9e-56 223.0 238 56.7
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 2.9e-56 223.0 238 56.7
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 2.9e-56 223.0 238 56.7
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 3.8e-56 222.6 238 56.7
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 6.5e-56 221.9 270 54.4
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 1.1e-55 221.1 203 63.1
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 1.9e-55 220.3 257 54.5
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 4.2e-55 219.2 221 57.5
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 5.5e-55 218.8 269 51.7
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 5.5e-55 218.8 269 51.7
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 2.7e-54 216.5 193 63.7
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 2.7e-54 216.5 284 48.6
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 4.6e-54 215.7 271 51.3
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 7.9e-54 214.9 283 49.1
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 3.0e-53 213.0 217 61.3
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 1.9e-52 210.3 258 52.7
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 5.7e-52 208.8 274 50.7
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 5.7e-52 208.8 224 54.9
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 2.2e-51 206.8 256 53.5
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 2.8e-51 206.5 268 51.5
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 3.4e-49 199.5 208 61.5
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 1.7e-48 197.2 290 49.7
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 3.9e-45 186.0 193 61.7
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 9.7e-44 181.4 298 45.0
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 1.1e-42 177.9 154 61.7
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 3.1e-42 176.4 254 47.6
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 7.7e-41 171.8 266 44.7
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 1.0e-37 161.4 259 42.9
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 2.3e-37 160.2 269 43.1
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 6.3e-35 152.1 185 51.4
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 2.0e-33 147.1 132 61.4
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 1.0e-32 144.8 135 65.9
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 1.0e-32 144.8 217 46.1
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 1.0e-32 144.8 226 44.2
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 1.7e-32 144.1 205 44.9
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 3.8e-32 142.9 247 40.9
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 8.5e-32 141.7 267 41.2
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 2.5e-31 140.2 289 39.4
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 1.1e-26 124.8 183 48.6
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 1.4e-26 124.4 166 48.2
Lsat_1_v5_gn_0_4360 Lactuca sativa HOM05D005433 ORTHO05D006675 7.0e-26 122.1 126 59.5
Oeu051093.1 Olea europaea HOM05D005433 ORTHO05D006675 9.1e-26 121.7 183 45.9
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 5.9e-25 119.0 159 49.7
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 5.9e-25 119.0 159 49.7
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 1.6e-22 110.9 102 59.8
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 4.7e-22 109.4 234 38.0
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 4.7e-22 109.4 140 49.3
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 1.4e-21 107.8 231 39.4
BcaB01g02390 Brassica carinata HOM05D005433 ORTHO05D006675 9.8e-20 101.7 197 41.1
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 6.3e-19 99.0 127 55.1
CARHR090080 Cardamine hirsuta HOM05D005433 ORTHO05D006675 2.7e-17 93.6 73 68.5
Oeu055126.1 Olea europaea HOM05D005433 ORTHO05D006675 3.8e-16 89.7 126 50.8
EL10Ac5g11588 Beta vulgaris HOM05D005433 ORTHO05D006675 8.0e-14 82.0 72 62.5
Lsat_1_v5_gn_4_180780 Lactuca sativa HOM05D005433 ORTHO05D006675 5.2e-13 79.3 60 71.7
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 6.8e-13 79.0 145 40.0
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 8.3e-11 72.0 165 29.7
Lsat_1_v5_gn_5_140640 Lactuca sativa HOM05D005433 ORTHO05D006675 4.1e-10 69.7 46 71.7
TAR629G0034 Trochodendron aralioides HOM05D005433 ORTHO05D006675 2.9e-08 63.5 81 50.6
PRCOL_00001575 Prasinoderma coloniale HOM05D005433 ORTHO05D006675 6.6e-08 62.4 213 32.4
Actinidia09909 Actinidia chinensis HOM05D005433 ORTHO05D006675 4.3e-07 59.7 44 70.5
EL10Ac1g01129 Beta vulgaris HOM05D005433 ORTHO05D006675 4.7e-06 56.2 34 82.4


User provided reference genes

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