Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005221g0040 Nicotiana tabacum HOM05D001295 ORTHO05D282870 3.8e-32 141.0 74 100.0
Nitab4.5_0002143g0010 Nicotiana tabacum HOM05D001295 ORTHO05D284347 9.0e-26 119.8 67 92.5
Peaxi162Scf00296g00811 Petunia axillaris HOM05D001295 ORTHO05D002125 2.5e-07 58.5 32 90.6
DCAR_026527 Daucus carota HOM05D001295 ORTHO05D002125 3.2e-07 58.2 32 90.6
Nitab4.5_0013215g0010 Nicotiana tabacum HOM05D001295 ORTHO05D002125 5.5e-07 57.4 32 87.5
SalBow3G4234 Salvia bowleyana HOM05D001295 ORTHO05D002125 5.5e-07 57.4 33 84.8
MD13G1258200 Malus domestica HOM05D001295 ORTHO05D002125 7.1e-07 57.0 36 77.8
AL3G52180 Arabidopsis lyrata HOM05D001295 ORTHO05D002125 9.3e-07 56.6 42 69.0
CAN.G321.34 Capsicum annuum HOM05D001295 ORTHO05D002125 9.3e-07 56.6 31 90.3
Nitab4.5_0000751g0080 Nicotiana tabacum HOM05D001295 ORTHO05D002125 9.3e-07 56.6 31 90.3
Nitab4.5_0000819g0050 Nicotiana tabacum HOM05D001295 ORTHO05D002125 9.3e-07 56.6 31 90.3
Nitab4.5_0004325g0050 Nicotiana tabacum HOM05D001295 ORTHO05D002125 9.3e-07 56.6 31 90.3
Nitab4.5_0006561g0010 Nicotiana tabacum HOM05D001295 ORTHO05D002125 9.3e-07 56.6 31 90.3
Nitab4.5_0016488g0010 Nicotiana tabacum HOM05D001295 ORTHO05D283173 9.3e-07 56.6 34 82.4
Peaxi162Scf00253g00512 Petunia axillaris HOM05D001295 ORTHO05D002125 9.3e-07 56.6 31 90.3
Solyc11g008510.3 Solanum lycopersicum HOM05D001295 ORTHO05D002125 9.3e-07 56.6 31 90.3
Sopen11g004300 Solanum pennellii HOM05D001295 ORTHO05D002125 9.3e-07 56.6 31 90.3
PGSC0003DMG400007429 Solanum tuberosum HOM05D001295 ORTHO05D002125 9.3e-07 56.6 31 90.3
AUR62002354 Chenopodium quinoa HOM05D001295 ORTHO05D002125 1.2e-06 56.2 32 87.5
DCAR_024440 Daucus carota HOM05D001295 ORTHO05D002125 1.2e-06 56.2 31 90.3
Oeu056129.3 Olea europaea HOM05D001295 ORTHO05D002125 1.2e-06 56.2 32 87.5
TAR365G0765 Trochodendron aralioides HOM05D001295 ORTHO05D002125 1.2e-06 56.2 32 87.5
BraA03t11634Z Brassica rapa HOM05D001295 ORTHO05D002125 1.6e-06 55.8 34 82.4
ClCG06G000980 Citrullus lanatus HOM05D001295 ORTHO05D002125 1.6e-06 55.8 36 72.2
EL10Ac3g06016 Beta vulgaris HOM05D001295 ORTHO05D002125 2.1e-06 55.5 50 60.0
EL10Ac6g13768 Beta vulgaris HOM05D001295 ORTHO05D002125 2.1e-06 55.5 50 60.0
BolC4t24899H Brassica oleracea HOM05D001295 ORTHO05D002125 2.1e-06 55.5 40 70.0
FvH4_6g00180 Fragaria vesca HOM05D001295 ORTHO05D002125 2.1e-06 55.5 33 81.8
Nitab4.5_0021847g0010 Nicotiana tabacum HOM05D001295 ORTHO05D002125 2.1e-06 55.5 31 87.1
Peaxi162Scf00627g00008 Petunia axillaris HOM05D001295 ORTHO05D002125 2.1e-06 55.5 31 87.1
Rhsim02G0082600 Rhododendron simsii HOM05D001295 ORTHO05D002125 2.1e-06 55.5 34 79.4
Sc06g0004970 Simmondsia chinensis HOM05D001295 ORTHO05D002125 2.1e-06 55.5 34 82.4
Solyc05g055640.4 Solanum lycopersicum HOM05D001295 ORTHO05D002125 2.1e-06 55.5 31 87.1
Sopen05g034080 Solanum pennellii HOM05D001295 ORTHO05D002125 2.1e-06 55.5 31 87.1
PGSC0003DMG400016814 Solanum tuberosum HOM05D001295 ORTHO05D002125 2.1e-06 55.5 31 87.1
PGSC0003DMG400023477 Solanum tuberosum HOM05D000968 ORTHO05D003096 2.1e-06 55.5 31 87.1
BraA05t19364Z Brassica rapa HOM05D001295 ORTHO05D002125 2.7e-06 55.1 36 75.0
CSS0015814 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D002125 2.7e-06 55.1 32 84.4
Ca_20804_v3 Cicer arietinum L. HOM05D001295 ORTHO05D003242 2.7e-06 55.1 41 65.9
CsaV3_2G010500 Cucumis sativus L. HOM05D001295 ORTHO05D002125 2.7e-06 55.1 32 84.4
Hma1.2p1_0022F.1_g014786 Hydrangea macrophylla HOM05D001295 ORTHO05D002125 2.7e-06 55.1 32 84.4
Hma1.2p1_0487F.1_g163630 Hydrangea macrophylla HOM05D001295 ORTHO05D002125 2.7e-06 55.1 32 84.4
Hma1.2p1_3259F.1_g334640 Hydrangea macrophylla HOM05D001295 ORTHO05D002125 2.7e-06 55.1 32 84.4
Hma1.2p1_3259F.1_g334643 Hydrangea macrophylla HOM05D001295 ORTHO05D002125 2.7e-06 55.1 32 84.4
Nitab4.5_0007609g0010 Nicotiana tabacum HOM05D001295 ORTHO05D011163 2.7e-06 55.1 31 87.1
Oeu027749.1 Olea europaea HOM05D001295 ORTHO05D002125 2.7e-06 55.1 32 84.4
Sabra07G0107000 Salix brachista HOM05D001295 ORTHO05D002125 2.7e-06 55.1 32 84.4
Sabra07G0118900 Salix brachista HOM05D001295 ORTHO05D002125 2.7e-06 55.1 32 84.4
Sed0002070 Sechium edule HOM05D001295 ORTHO05D002125 2.7e-06 55.1 33 81.8
unitig_18.g30056 Utricularia gibba HOM05D001295 ORTHO05D002125 2.7e-06 55.1 32 84.4
unitig_578.g16254 Utricularia gibba HOM05D001295 ORTHO05D002125 2.7e-06 55.1 32 84.4
AL4G42190 Arabidopsis lyrata HOM05D001295 ORTHO05D002125 3.5e-06 54.7 32 84.4
A03p24250 Brassica napus HOM05D001295 ORTHO05D002125 3.5e-06 54.7 32 84.4
C04p33370 Brassica napus HOM05D001295 ORTHO05D002125 3.5e-06 54.7 32 84.4
CSS0013705 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D002125 3.5e-06 54.7 56 58.9
MELO3C022441.2 Cucumis melo HOM05D001295 ORTHO05D002125 3.5e-06 54.7 33 78.8
EL10Ac3g06017 Beta vulgaris HOM05D001295 ORTHO05D002125 4.6e-06 54.3 33 81.8
CiPaw.07G083200 Carya illinoinensis HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
COL.COLO4_08217 Corchorus olitorius HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Duzib212G0002 Durio zibethinus HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Duzib268G1657 Durio zibethinus HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
FvH4_2g11140 Fragaria vesca HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
FAN15G2624 Fragaria x ananassa HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
FAN20G0399 Fragaria x ananassa HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
FAN24G0013 Fragaria x ananassa HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
FAN27G0739 Fragaria x ananassa HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Gohir.A02G010900 Gossypium hirsutum HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Gohir.A09G212400 Gossypium hirsutum HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Gohir.D02G011500 Gossypium hirsutum HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Gohir.D09G205900 Gossypium hirsutum HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Gorai.005G014500 Gossypium raimondii HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Gorai.006G229800 Gossypium raimondii HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
MBI01_g38808_MAGBIO Magnolia biondii HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
MD04G1045900 Malus domestica HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Oeu022684.1 Olea europaea HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Oeu034441.1 Olea europaea HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
RcHm_v2.0_Chr6g0269441 Rosa chinensis HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Sed0001553 Sechium edule HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Sed0021210 Sechium edule HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 83.9
Thecc.04G174000 Theobroma cacao HOM05D001295 ORTHO05D002125 4.6e-06 54.3 31 87.1
Aa31LG10G13880 Aethionema arabicum HOM05D001295 ORTHO05D002125 6.0e-06 53.9 36 75.0
Aqoxy5G00029 Aquilegia oxysepala HOM05D001295 ORTHO05D002125 6.0e-06 53.9 31 87.1
CANSAT54G0654 Cannabis sativa HOM05D001295 ORTHO05D002125 6.0e-06 53.9 34 79.4
CiPaw.05G016100 Carya illinoinensis HOM05D001295 ORTHO05D002125 6.0e-06 53.9 29 89.7
FAN09G3849 Fragaria x ananassa HOM05D001295 ORTHO05D002125 6.0e-06 53.9 32 81.2
Gohir.D02G111500 Gossypium hirsutum HOM05D001295 ORTHO05D002125 6.0e-06 53.9 31 87.1
Lsat_1_v5_gn_3_22520 Lactuca sativa HOM05D001295 ORTHO05D002125 6.0e-06 53.9 32 81.2
MBI16_g34949_MAGBIO Magnolia biondii HOM05D001295 ORTHO05D002125 6.0e-06 53.9 29 89.7
QL09p019105 Quercus lobata HOM05D001295 ORTHO05D002125 6.0e-06 53.9 31 87.1
QL11p031711 Quercus lobata HOM05D001295 ORTHO05D002125 6.0e-06 53.9 31 87.1
TWI18G1377 Tripterygium wilfordii HOM05D001295 ORTHO05D002125 6.0e-06 53.9 31 87.1
BolC8t51056H Brassica oleracea HOM05D001295 ORTHO05D002125 7.9e-06 53.5 38 71.1
Ca_18159_v3 Cicer arietinum L. HOM05D001295 ORTHO05D002125 7.9e-06 53.5 30 90.0
ECA240G0894 Erigeron canadensis HOM05D001295 ORTHO05D002125 7.9e-06 53.5 31 83.9
Migut.F01852 Erythranthe guttata HOM05D001295 ORTHO05D002125 7.9e-06 53.5 31 83.9
Potri.007G131800 Populus trichocarpa HOM05D001295 ORTHO05D002125 7.9e-06 53.5 31 83.9
Prupe.1G193400 Prunus persica HOM05D001295 ORTHO05D002125 7.9e-06 53.5 31 83.9
Prupe.1G198900 Prunus persica HOM05D001295 ORTHO05D002125 7.9e-06 53.5 31 83.9
Prupe.6G363900 Prunus persica HOM05D001295 ORTHO05D002125 7.9e-06 53.5 31 83.9
Prupe.7G035900 Prunus persica HOM05D001295 ORTHO05D002125 7.9e-06 53.5 31 83.9
TWI15G0029 Tripterygium wilfordii HOM05D001295 ORTHO05D002125 7.9e-06 53.5 61 52.5
HPP92_023719 Vanilla planifolia HOM05D001295 ORTHO05D002125 7.9e-06 53.5 32 81.2
GSVIVG01019051001 Vitis vinifera HOM05D001295 ORTHO05D002125 7.9e-06 53.5 34 79.4


User provided reference genes

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