Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 6.3e-160 567.4 286 100.0
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 2.0e-145 519.2 292 91.4
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 2.0e-97 359.8 272 74.6
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 3.7e-96 355.5 272 73.9
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 3.7e-96 355.5 272 73.9
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 1.3e-83 313.9 275 65.1
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 1.4e-71 273.9 256 58.2
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 9.3e-71 271.2 277 58.1
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 4.6e-70 268.9 289 54.7
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 1.8e-69 266.9 275 56.4
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 1.1e-68 264.2 272 56.2
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 2.5e-68 263.1 203 67.5
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 4.3e-68 262.3 271 56.8
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 1.3e-67 260.8 253 56.1
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 3.7e-67 259.2 232 61.2
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 3.7e-67 259.2 272 56.2
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 4.8e-67 258.8 273 55.7
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 8.1e-67 258.1 265 56.6
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.1e-66 257.7 215 63.7
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 1.1e-66 257.7 264 57.2
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 1.4e-66 257.3 262 56.1
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 1.4e-66 257.3 253 57.7
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 1.8e-66 256.9 237 60.3
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 3.1e-66 256.1 253 55.7
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 3.1e-66 256.1 253 56.1
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 6.9e-66 255.0 202 65.3
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 1.2e-65 254.2 253 54.2
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 2.6e-65 253.1 240 57.9
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 4.5e-65 252.3 202 63.9
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 4.5e-65 252.3 253 55.7
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 7.6e-65 251.5 245 56.3
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 1.0e-64 251.1 274 52.9
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 1.3e-64 250.8 209 61.7
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 1.7e-64 250.4 254 55.1
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 1.7e-64 250.4 263 54.0
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 2.9e-64 249.6 227 58.6
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 3.8e-64 249.2 258 52.3
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 4.9e-64 248.8 273 55.7
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 6.5e-64 248.4 209 63.2
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 6.5e-64 248.4 214 60.3
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 1.1e-63 247.7 178 70.2
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 1.4e-63 247.3 292 51.0
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 1.9e-63 246.9 214 61.2
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 3.2e-63 246.1 275 54.5
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 5.5e-63 245.4 205 62.4
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 7.1e-63 245.0 206 62.6
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 7.1e-63 245.0 214 60.3
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 7.1e-63 245.0 243 55.6
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 2.7e-62 243.0 255 53.7
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 2.7e-62 243.0 203 62.1
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 2.7e-62 243.0 202 62.9
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 4.6e-62 242.3 261 54.4
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 6.0e-62 241.9 196 64.3
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 6.0e-62 241.9 289 49.5
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 7.9e-62 241.5 264 53.0
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 1.8e-61 240.4 203 62.6
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 2.3e-61 240.0 203 61.1
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 3.9e-61 239.2 223 59.2
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 3.9e-61 239.2 273 50.5
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 5.1e-61 238.8 307 51.1
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 6.7e-61 238.4 211 57.8
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 8.7e-61 238.0 209 62.2
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 2.5e-60 236.5 256 52.3
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 3.3e-60 236.1 191 61.8
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 5.7e-60 235.3 256 50.8
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 2.1e-59 233.4 253 53.0
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 2.8e-59 233.0 258 51.2
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 8.2e-59 231.5 223 53.8
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 6.9e-58 228.4 207 59.4
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 1.2e-57 227.6 265 50.2
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 1.5e-57 227.3 253 52.6
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 2.0e-57 226.9 190 61.1
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 5.9e-57 225.3 279 47.3
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 5.9e-57 225.3 192 59.9
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 1.7e-56 223.8 265 49.1
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 2.2e-56 223.4 260 51.2
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 5.0e-56 222.2 251 51.4
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 1.4e-55 220.7 205 57.1
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 3.2e-55 219.5 214 55.6
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 3.2e-55 219.5 190 58.9
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 5.5e-55 218.8 267 49.1
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 7.2e-55 218.4 213 55.9
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 9.3e-55 218.0 213 56.3
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 1.2e-54 217.6 190 57.9
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 2.7e-54 216.5 237 50.6
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 7.9e-54 214.9 208 54.8
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 1.8e-53 213.8 263 50.2
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 1.8e-53 213.8 190 59.5
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 3.0e-53 213.0 158 67.7
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 1.1e-52 211.1 205 53.7
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 1.6e-51 207.2 264 50.4
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 1.1e-50 204.5 153 73.2
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 2.4e-50 203.4 203 57.1
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 4.5e-49 199.1 291 44.7
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 3.8e-48 196.1 166 61.4
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 2.7e-46 189.9 152 66.4
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 1.4e-45 187.6 191 56.5
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 1.4e-45 187.6 275 44.4
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 8.8e-45 184.9 153 63.4
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.5e-44 184.1 143 67.1
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 2.0e-44 183.7 193 53.4
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 2.2e-43 180.3 166 59.0
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 1.8e-42 177.2 176 56.2
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.5e-41 174.1 145 63.4
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 2.9e-40 169.9 203 42.9
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 1.2e-38 164.5 167 53.9
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 6.1e-38 162.2 112 69.6
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 9.7e-36 154.8 189 45.5
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.7e-35 154.1 116 66.4
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 9.1e-34 148.3 173 56.1
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 2.0e-33 147.1 196 43.9
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 1.5e-31 141.0 153 53.6
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 8.0e-30 135.2 132 61.4
Peaxi162Scf00767g00522 Petunia axillaris HOM05D001890 ORTHO05D008163 1.8e-26 124.0 247 38.1
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 4.1e-26 122.9 190 38.4
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 1.3e-24 117.9 145 45.5
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 5.7e-20 102.4 179 37.4
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 5.7e-20 102.4 179 37.4
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 1.6e-17 94.4 81 63.0
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 5.0e-16 89.4 123 40.7
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 5.5e-15 85.9 271 26.9
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 4.7e-14 82.8 165 35.2
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 2.0e-12 77.4 103 48.5
Lj3C241T8 Lonicera japonica HOM05D001890 ORTHO05D008163 2.5e-07 60.5 53 54.7


User provided reference genes

Program Settings