Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005206g0020 Nicotiana tabacum HOM05D005889 ORTHO05D007495 8.0e-86 320.5 172 100.0
Nitab4.5_0001952g0130 Nicotiana tabacum HOM05D005889 ORTHO05D007495 7.1e-74 280.8 188 84.6
PGSC0003DMG400000508 Solanum tuberosum HOM05D005889 ORTHO05D007495 6.9e-61 237.7 188 73.9
Solyc02g087150.3 Solanum lycopersicum HOM05D005889 ORTHO05D007495 2.0e-60 236.1 188 73.4
Sopen02g031900 Solanum pennellii HOM05D005889 ORTHO05D007495 8.4e-59 230.7 188 72.9
CAN.G206.53 Capsicum annuum HOM05D005889 ORTHO05D007495 2.4e-53 212.6 195 66.7
Peaxi162Scf00129g00825 Petunia axillaris HOM05D005889 ORTHO05D007495 1.9e-39 166.4 187 57.8
Oeu047335.1 Olea europaea HOM05D005889 ORTHO05D007495 1.5e-28 130.2 187 49.7
SGA_v2.0_scaffold205G41723 Striga asiatica HOM05D005889 ORTHO05D007495 7.6e-28 127.9 192 49.0
Manes.17G118700 Manihot esculenta HOM05D005889 ORTHO05D007495 1.3e-27 127.1 198 47.0
MSTRG.15501 Avicennia marina HOM05D005889 ORTHO05D007495 1.7e-27 126.7 106 70.8
Migut.K01361 Erythranthe guttata HOM05D005889 ORTHO05D007495 2.2e-27 126.3 102 70.6
MD17G1039100 Malus domestica HOM05D005889 ORTHO05D007495 2.2e-27 126.3 185 48.1
GSVIVG01032527001 Vitis vinifera HOM05D005889 ORTHO05D007495 2.9e-27 125.9 78 87.2
SalBow1G5017 Salvia bowleyana HOM05D005889 ORTHO05D007495 3.8e-27 125.6 121 62.8
TAR371G1159 Trochodendron aralioides HOM05D005889 ORTHO05D007495 6.5e-27 124.8 182 48.4
Hma1.2p1_0697F.1_g204970 Hydrangea macrophylla HOM05D005889 ORTHO05D007495 1.1e-26 124.0 189 47.1
Rhsim10G0026900 Rhododendron simsii HOM05D005889 ORTHO05D007495 1.4e-26 123.6 192 47.4
CiPaw.03G035200 Carya illinoinensis HOM05D005889 ORTHO05D007495 2.5e-26 122.9 76 86.8
Actinidia06039 Actinidia chinensis HOM05D005889 ORTHO05D007495 3.2e-26 122.5 185 47.0
Cfa007463 Carpinus fangiana HOM05D001690 ORTHO05D002627 3.2e-26 122.5 76 85.5
PSO832G3377 Papaver somniferum HOM05D005889 ORTHO05D007495 3.2e-26 122.5 177 48.6
Cc07_g02540 Coffea canephora HOM05D005889 ORTHO05D007495 4.2e-26 122.1 80 81.2
QL02p077702 Quercus lobata HOM05D005889 ORTHO05D007495 5.5e-26 121.7 94 75.5
CSS0022009 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 9.3e-26 120.9 105 65.7
PSO063G7534 Papaver somniferum HOM05D005889 ORTHO05D007495 1.2e-25 120.6 189 48.1
Rhsim10G0026400 Rhododendron simsii HOM05D005889 ORTHO05D007495 1.2e-25 120.6 192 47.9
Manes.15G180360 Manihot esculenta HOM05D005889 ORTHO05D007495 1.6e-25 120.2 102 70.6
Nn4g22882 Nelumbo nucifera HOM05D005889 ORTHO05D007495 1.6e-25 120.2 182 46.2
Eucgr.J02175 Eucalyptus grandis HOM05D005889 ORTHO05D007495 2.1e-25 119.8 89 76.4
Sabra16G0230000 Salix brachista HOM05D005889 ORTHO05D007495 2.7e-25 119.4 88 75.0
Sed0023571 Sechium edule HOM05D005889 ORTHO05D007495 2.7e-25 119.4 78 78.2
CsaV3_3G042070 Cucumis sativus L. HOM05D005889 ORTHO05D007495 3.6e-25 119.0 181 45.9
Gorai.001G259800 Gossypium raimondii HOM05D005889 ORTHO05D007495 3.6e-25 119.0 189 45.5
Prupe.3G279900 Prunus persica HOM05D005889 ORTHO05D007495 3.6e-25 119.0 103 66.0
Aqoxy3G03079 Aquilegia oxysepala HOM05D005889 ORTHO05D007495 4.6e-25 118.6 173 48.0
CSS0028338 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 4.6e-25 118.6 166 52.4
CSS0046645 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 4.6e-25 118.6 166 51.8
AUR62032095 Chenopodium quinoa HOM05D005889 ORTHO05D007495 4.6e-25 118.6 194 45.4
Ah.16g106950 Amaranthus hybridus HOM05D005889 ORTHO05D007495 6.1e-25 118.2 143 48.3
Gohir.D07G225400 Gossypium hirsutum HOM05D005889 ORTHO05D007495 6.1e-25 118.2 189 45.5
PGR083G2278 Punica granatum HOM05D005889 ORTHO05D007495 6.1e-25 118.2 177 48.6
BraA02t05248Z Brassica rapa HOM05D005889 ORTHO05D007495 1.0e-24 117.5 78 74.4
CANSAT64G0610 Cannabis sativa HOM05D005889 ORTHO05D007495 1.0e-24 117.5 137 53.3
DCAR_011198 Daucus carota HOM05D005889 ORTHO05D007495 1.0e-24 117.5 178 48.9
A02p02770 Brassica napus HOM05D005889 ORTHO05D007495 1.3e-24 117.1 102 61.8
Glyma.13G070100 Glycine max HOM05D005889 ORTHO05D007495 1.3e-24 117.1 123 58.5
MBI14_g42400_MAGBIO Magnolia biondii HOM05D005889 ORTHO05D007495 1.3e-24 117.1 79 75.9
BcaB01g05094 Brassica carinata HOM05D005889 ORTHO05D007495 2.3e-24 116.3 78 73.1
Lj7C409T13 Lonicera japonica HOM05D005889 ORTHO05D007495 2.3e-24 116.3 126 58.7
Potri.001G350500 Populus trichocarpa HOM05D005889 ORTHO05D007495 2.3e-24 116.3 147 51.0
Sp6g29140 Schrenkiella parvula HOM05D005889 ORTHO05D007495 2.3e-24 116.3 78 73.1
BcaNung05888 Brassica carinata HOM05D005889 ORTHO05D007495 3.0e-24 115.9 78 71.8
C02p07380 Brassica napus HOM05D005889 ORTHO05D007495 3.0e-24 115.9 78 71.8
BolC2t06669H Brassica oleracea HOM05D005889 ORTHO05D007495 3.0e-24 115.9 78 71.8
CANSAT64G2621 Cannabis sativa HOM05D005889 ORTHO05D007495 3.0e-24 115.9 96 67.7
CARHR198430 Cardamine hirsuta HOM05D005889 ORTHO05D007495 3.9e-24 115.5 101 61.4
MBI14_g19739_MAGBIO Magnolia biondii HOM05D005889 ORTHO05D007495 3.9e-24 115.5 192 44.3
BcaNung03088 Brassica carinata HOM05D005889 ORTHO05D007495 5.1e-24 115.2 78 71.8
C03p07840 Brassica napus HOM05D005889 ORTHO05D007495 5.1e-24 115.2 77 74.0
BolC3t13283H Brassica oleracea HOM05D005889 ORTHO05D007495 5.1e-24 115.2 77 74.0
BraA03t10009Z Brassica rapa HOM05D005889 ORTHO05D007495 5.1e-24 115.2 77 74.0
TWI56G0856 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 5.1e-24 115.2 195 44.1
Atru.chr8.2424 Acer truncatum HOM05D005889 ORTHO05D007495 6.7e-24 114.8 189 45.0
unitig_21.g20501 Utricularia gibba HOM05D005889 ORTHO05D007495 6.7e-24 114.8 119 55.5
arahy.Tifrunner.gnm1.ann1.LQS8H1 Arachis hypogaea HOM05D005889 ORTHO05D007495 8.7e-24 114.4 91 70.3
arahy.Tifrunner.gnm1.ann1.XH0R3V Arachis hypogaea HOM05D005889 ORTHO05D007495 8.7e-24 114.4 91 70.3
MELO3C009927.2 Cucumis melo HOM05D005889 ORTHO05D007495 8.7e-24 114.4 183 45.4
Phvul.004G019800 Phaseolus vulgaris HOM05D005889 ORTHO05D007495 8.7e-24 114.4 160 49.4
BcaB01g05020 Brassica carinata HOM05D005889 ORTHO05D007495 1.5e-23 113.6 93 64.5
Ciclev10012884m.g Citrus clementina HOM05D005889 ORTHO05D007495 1.5e-23 113.6 181 44.8
COL.COLO4_32001 Corchorus olitorius HOM05D005889 ORTHO05D007495 1.5e-23 113.6 78 74.4
Thhalv10014795m.g Eutrema salsugineum HOM05D005889 ORTHO05D007495 1.9e-23 113.2 78 70.5
Sed0001958 Sechium edule HOM05D005889 ORTHO05D007495 1.9e-23 113.2 136 52.2
EL10Ac2g03378 Beta vulgaris HOM05D005889 ORTHO05D007495 2.5e-23 112.8 76 76.3
Duzib147G1282 Durio zibethinus HOM05D005889 ORTHO05D007495 2.5e-23 112.8 78 74.4
Thecc.04G004200 Theobroma cacao HOM05D005889 ORTHO05D007495 2.5e-23 112.8 78 75.6
A03p06840 Brassica napus HOM05D005889 ORTHO05D007495 3.3e-23 112.5 183 42.6
ECA238G1302 Erigeron canadensis HOM05D005889 ORTHO05D007495 3.3e-23 112.5 180 43.9
VMungo0464G2061 Vigna mungo HOM05D001690 ORTHO05D002627 3.3e-23 112.5 107 64.5
Carub.0006s1306 Capsella rubella HOM05D005889 ORTHO05D007495 4.3e-23 112.1 100 61.0
Glyma.19G012900 Glycine max HOM05D005889 ORTHO05D007495 4.3e-23 112.1 123 55.3
CDE01G0491 Ceratophyllum demersum HOM05D005889 ORTHO05D007495 7.4e-23 111.3 103 64.1
FvH4_6g50270 Fragaria vesca HOM05D005889 ORTHO05D007495 7.4e-23 111.3 104 64.4
FAN14G2248 Fragaria x ananassa HOM05D005889 ORTHO05D007495 7.4e-23 111.3 104 64.4
Sc20g0002790 Simmondsia chinensis HOM05D005889 ORTHO05D007495 9.7e-23 110.9 107 64.5
HanXRQChr14g0448791 Helianthus annuus HOM05D005889 ORTHO05D007495 1.3e-22 110.5 187 43.9
Peaxi162Scf00700g00623 Petunia axillaris HOM05D005889 ORTHO05D007495 1.3e-22 110.5 72 80.6
THA.LOC104821069 Tarenaya hassleriana HOM05D005889 ORTHO05D007495 1.3e-22 110.5 107 58.9
AT5G14910 Arabidopsis thaliana HOM05D005889 ORTHO05D007495 1.7e-22 110.2 101 58.4
FAN05G0142 Fragaria x ananassa HOM05D005889 ORTHO05D007495 2.2e-22 109.8 185 44.9
FAN09G4317 Fragaria x ananassa HOM05D005889 ORTHO05D007495 2.8e-22 109.4 180 46.1
CDE02G1560 Ceratophyllum demersum HOM05D005889 ORTHO05D007495 4.8e-22 108.6 102 62.7
RcHm_v2.0_Chr2g0170581 Rosa chinensis HOM05D005889 ORTHO05D007495 4.8e-22 108.6 90 68.9
THA.LOC104822380 Tarenaya hassleriana HOM05D005889 ORTHO05D007495 6.3e-22 108.2 89 62.9
Ca_04220_v3 Cicer arietinum L. HOM05D005889 ORTHO05D007495 8.2e-22 107.8 92 68.5
TWI12G0403 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 8.2e-22 107.8 98 63.3
vmacro05795 Vaccinium macrocarpon HOM05D005889 ORTHO05D007495 1.1e-21 107.5 222 42.3
ATR0787G083 Amborella trichopoda HOM05D005889 ORTHO05D007495 1.4e-21 107.1 73 75.3
Psat1g080040 Pisum sativum HOM05D005889 ORTHO05D007495 3.1e-21 105.9 95 63.2
TWI56G0985 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 4.1e-21 105.5 101 62.4
FAN02G1209 Fragaria x ananassa HOM05D005889 ORTHO05D007495 5.3e-21 105.1 106 63.2
Lsat_1_v5_gn_2_92760 Lactuca sativa HOM05D005889 ORTHO05D007495 1.2e-20 104.0 100 61.0
Hund20036 Selenicereus undatus HOM05D005889 ORTHO05D007495 1.5e-20 103.6 186 43.5
ClCG10G014500 Citrullus lanatus HOM05D005889 ORTHO05D007495 2.6e-20 102.8 95 64.2
Lj2g0018244 Lotus japonicus HOM05D005889 ORTHO05D007495 2.6e-20 102.8 92 64.1
HanXRQChr12g0385561 Helianthus annuus HOM05D005889 ORTHO05D007495 3.4e-20 102.4 151 46.4
Medtr6g007887 Medicago truncatula HOM05D005889 ORTHO05D007495 4.5e-20 102.1 93 64.5
Aa31LG11G14590 Aethionema arabicum HOM05D005889 ORTHO05D007495 7.7e-20 101.3 161 42.2
Os05g0337400 Oryza sativa ssp. japonica HOM05D005889 ORTHO05D007495 1.0e-19 100.9 130 50.0
Lalb_Chr21g0319321 Lupinus albus HOM05D000340 ORTHO05D000821 2.2e-19 99.8 81 60.5
Zm00001eb286710 Zea mays HOM05D005889 ORTHO05D007495 3.2e-18 95.9 99 57.6
Rhsim10G0027100 Rhododendron simsii HOM05D005889 ORTHO05D007495 3.0e-16 89.4 57 80.7
Pp3c1_25290 Physcomitrium patens HOM05D005889 ORTHO05D007495 5.7e-15 85.1 102 53.9
Pp3c2_14600 Physcomitrium patens HOM05D005889 ORTHO05D007495 9.7e-15 84.3 101 48.5
Mapoly0034s0091 Marchantia polymorpha HOM05D005889 ORTHO05D007495 2.2e-14 83.2 102 47.1
Pp3c10_16560 Physcomitrium patens HOM05D005889 ORTHO05D007495 8.2e-14 81.3 103 50.5
CSS0042844 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 2.0e-12 76.6 63 71.4
SMO119G0369 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 5.9e-12 75.1 102 39.2
RcHm_v2.0_Chr2g0170541 Rosa chinensis HOM05D005889 ORTHO05D007495 2.2e-11 73.2 58 70.7
TPR.G132 Trifolium pratense HOM05D005889 ORTHO05D007495 9.4e-10 67.8 43 79.1
SEGI_28638 Sequoiadendron giganteum HOM05D005889 ORTHO05D007495 2.8e-06 56.2 95 42.1
SMO163G0046 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 4.8e-06 55.5 76 36.8
TAR629G0556 Trochodendron aralioides HOM05D001690 ORTHO05D009096 4.8e-06 55.5 38 76.3


User provided reference genes

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