Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005205g0020 Nicotiana tabacum HOM05D000522 ORTHO05D285514 2.9e-52 208.4 111 100.0
Nitab4.5_0002705g0010 Nicotiana tabacum HOM05D000522 ORTHO05D004380 1.0e-20 103.6 69 82.6
Nitab4.5_0008625g0010 Nicotiana tabacum HOM05D000522 ORTHO05D004380 4.2e-19 98.2 69 79.7
Peaxi162Scf00552g00512 Petunia axillaris HOM05D000522 ORTHO05D004380 4.2e-19 98.2 67 79.1
Sopen05g015250 Solanum pennellii HOM05D000522 ORTHO05D004380 2.1e-18 95.9 69 75.4
Sopen07g011860 Solanum pennellii HOM05D000522 ORTHO05D004380 6.0e-18 94.4 69 72.5
Solyc05g018410.3 Solanum lycopersicum HOM05D000522 ORTHO05D004380 7.9e-18 94.0 69 73.9
Solyc05g018417.1 Solanum lycopersicum HOM05D000522 ORTHO05D004380 7.9e-18 94.0 69 73.9
Peaxi162Scf00560g00617 Petunia axillaris HOM05D000522 ORTHO05D004380 2.3e-17 92.4 69 73.9
Nitab4.5_0008529g0010 Nicotiana tabacum HOM05D000522 ORTHO05D004380 3.0e-17 92.0 69 71.0
CAN.G32.1 Capsicum annuum HOM05D000522 ORTHO05D004380 6.7e-17 90.9 69 69.6
CAN.G300.3 Capsicum annuum HOM05D000522 ORTHO05D004380 1.5e-16 89.7 77 70.1
Nitab4.5_0002363g0030 Nicotiana tabacum HOM05D000522 ORTHO05D004380 4.3e-16 88.2 69 69.6
Oeu058085.3 Olea europaea HOM05D000522 ORTHO05D004380 4.8e-15 84.7 69 63.8
SGA_v2.0_scaffold183G39892 Striga asiatica HOM05D000522 ORTHO05D004380 1.2e-13 80.1 69 60.9
Lj7A644G12 Lonicera japonica HOM05D000522 ORTHO05D004380 1.5e-13 79.7 68 60.3
unitig_46.g18395 Utricularia gibba HOM05D000522 ORTHO05D004380 4.5e-13 78.2 69 60.9
Migut.K00465 Erythranthe guttata HOM05D000522 ORTHO05D004380 1.0e-12 77.0 69 60.9
SalBow1G3152 Salvia bowleyana HOM05D000522 ORTHO05D004380 1.0e-12 77.0 69 58.0
Cc06_g09360 Coffea canephora HOM05D000522 ORTHO05D004380 1.3e-12 76.6 69 60.9
ECA234G1779 Erigeron canadensis HOM05D000522 ORTHO05D004380 8.5e-12 73.9 57 61.4
HanXRQChr10g0317641 Helianthus annuus HOM05D000522 ORTHO05D004380 2.5e-11 72.4 62 59.7
HanXRQChr10g0317741 Helianthus annuus HOM05D000522 ORTHO05D004380 2.5e-11 72.4 62 59.7
AUR62033399 Chenopodium quinoa HOM05D000522 ORTHO05D004380 4.2e-11 71.6 72 52.8
Medtr8g103840 Medicago truncatula HOM05D000522 ORTHO05D004380 4.2e-11 71.6 69 56.5
Glyma.05G232600 Glycine max HOM05D000522 ORTHO05D004380 5.5e-11 71.2 69 55.1
Lj7C643G7 Lonicera japonica HOM05D000522 ORTHO05D004380 5.5e-11 71.2 62 59.7
Lsat_1_v5_gn_5_100220 Lactuca sativa HOM05D000522 ORTHO05D004380 7.2e-11 70.9 62 56.5
Glyma.08G040000 Glycine max HOM05D000522 ORTHO05D004380 9.4e-11 70.5 69 53.6
HanXRQChr05g0138321 Helianthus annuus HOM05D000522 ORTHO05D004380 9.4e-11 70.5 62 56.5
MSTRG.26353 Avicennia marina HOM05D000522 ORTHO05D004380 1.6e-10 69.7 69 53.6
Cfa003289 Carpinus fangiana HOM05D000522 ORTHO05D004380 1.6e-10 69.7 69 53.6
Phvul.002G314900 Phaseolus vulgaris HOM05D000522 ORTHO05D004380 1.6e-10 69.7 57 61.4
Actinidia07420 Actinidia chinensis HOM05D000522 ORTHO05D004380 2.1e-10 69.3 62 56.5
TPR.G21700 Trifolium pratense HOM05D000522 ORTHO05D004380 2.1e-10 69.3 69 55.1
Manes.03G069100 Manihot esculenta HOM05D000522 ORTHO05D004380 2.7e-10 68.9 69 56.5
TWI63G0481 Tripterygium wilfordii HOM05D000522 ORTHO05D004380 2.7e-10 68.9 69 53.6
VMungo0251G1337 Vigna mungo HOM05D000522 ORTHO05D004380 2.7e-10 68.9 57 57.9
Actinidia20339 Actinidia chinensis HOM05D000522 ORTHO05D004380 3.6e-10 68.6 68 54.4
AUR62011027 Chenopodium quinoa HOM05D000522 ORTHO05D004380 3.6e-10 68.6 69 52.2
Haze_25684 Corylus avellana HOM05D000522 ORTHO05D004380 4.6e-10 68.2 69 52.2
Rhsim03G0244700 Rhododendron simsii HOM05D000522 ORTHO05D004380 4.6e-10 68.2 57 61.4
HanXRQChr13g0424731 Helianthus annuus HOM05D000522 ORTHO05D004380 6.1e-10 67.8 62 58.1
Lj4g0021382 Lotus japonicus HOM05D000522 ORTHO05D004380 7.9e-10 67.4 69 50.7
vmacro06197 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 7.9e-10 67.4 57 61.4
GSVIVG01015428001 Vitis vinifera HOM05D000522 ORTHO05D004380 7.9e-10 67.4 71 52.1
CiPaw.04G167000 Carya illinoinensis HOM05D000522 ORTHO05D004380 1.0e-09 67.0 69 52.2
COL.COLO4_34881 Corchorus olitorius HOM05D000522 ORTHO05D004380 1.0e-09 67.0 69 52.2
FvH4_1g05350 Fragaria vesca HOM05D000522 ORTHO05D004380 1.4e-09 66.6 68 51.5
FAN19G1578 Fragaria x ananassa HOM05D005850 ORTHO05D007405 1.4e-09 66.6 68 51.5
FAN23G2543 Fragaria x ananassa HOM05D005850 ORTHO05D007405 1.4e-09 66.6 68 51.5
FAN26G0510 Fragaria x ananassa HOM05D005850 ORTHO05D007405 1.4e-09 66.6 68 51.5
FAN26G3074 Fragaria x ananassa HOM05D005850 ORTHO05D007405 1.4e-09 66.6 68 51.5
FAN28G2217 Fragaria x ananassa HOM05D000522 ORTHO05D004380 1.4e-09 66.6 68 51.5
vmacro06199 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 1.4e-09 66.6 71 53.5
CSS0032661 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D004380 1.8e-09 66.2 62 56.5
Ciclev10008327m.g Citrus clementina HOM05D000522 ORTHO05D004380 1.8e-09 66.2 69 53.6
Potri.006G155700 Populus trichocarpa HOM05D000522 ORTHO05D004380 2.3e-09 65.9 57 59.6
Potri.006G156350 Populus trichocarpa HOM05D000522 ORTHO05D004380 2.3e-09 65.9 57 59.6
ECA236G2754 Erigeron canadensis HOM05D000522 ORTHO05D004380 3.0e-09 65.5 62 53.2
Gohir.A13G196800 Gossypium hirsutum HOM05D000522 ORTHO05D004380 3.0e-09 65.5 69 50.7
Psat7g012360 Pisum sativum HOM05D000522 ORTHO05D004380 3.0e-09 65.5 69 52.2
AT4G13360 Arabidopsis thaliana HOM05D000522 ORTHO05D004380 3.9e-09 65.1 58 56.9
Duzib168G0832 Durio zibethinus HOM05D000522 ORTHO05D004380 3.9e-09 65.1 57 57.9
Gohir.D13G202100 Gossypium hirsutum HOM05D000522 ORTHO05D004380 3.9e-09 65.1 69 50.7
Gorai.013G231000 Gossypium raimondii HOM05D000522 ORTHO05D004380 3.9e-09 65.1 69 50.7
Dinv41579 Davidia involucrata HOM05D000993 ORTHO05D004380 5.1e-09 64.7 59 55.9
Thhalv10025298m.g Eutrema salsugineum HOM05D000522 ORTHO05D004380 5.1e-09 64.7 58 55.2
QL02p086017 Quercus lobata HOM05D000522 ORTHO05D004380 5.1e-09 64.7 69 47.8
Psat7g014120 Pisum sativum HOM05D000522 ORTHO05D004380 6.7e-09 64.3 69 49.3
Ca_17345_v3 Cicer arietinum L. HOM05D000522 ORTHO05D004380 8.8e-09 63.9 58 56.9
CSS0022610 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D004380 1.1e-08 63.5 71 50.7
AUR62011039 Chenopodium quinoa HOM05D000522 ORTHO05D004380 1.5e-08 63.2 69 50.7
RcHm_v2.0_Chr2g0091031 Rosa chinensis HOM05D000522 ORTHO05D004380 1.5e-08 63.2 69 49.3
Sp7g10940 Schrenkiella parvula HOM05D000522 ORTHO05D004380 1.5e-08 63.2 57 54.4
Duzib150G0749 Durio zibethinus HOM05D000522 ORTHO05D004380 1.9e-08 62.8 57 56.1
Gohir.D07G004100 Gossypium hirsutum HOM05D000522 ORTHO05D004380 1.9e-08 62.8 69 50.7
Gorai.001G003700 Gossypium raimondii HOM05D000522 ORTHO05D004380 1.9e-08 62.8 69 50.7
vmacro08116 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 1.9e-08 62.8 68 50.0
Atru.chr7.1299 Acer truncatum HOM05D000522 ORTHO05D004380 2.5e-08 62.4 69 50.7
CANSAT56G3220 Cannabis sativa HOM05D000522 ORTHO05D004380 2.5e-08 62.4 69 46.4
CANSAT56G3667 Cannabis sativa HOM05D000522 ORTHO05D004380 2.5e-08 62.4 69 46.4
CARHR218930 Cardamine hirsuta HOM05D000522 ORTHO05D004380 2.5e-08 62.4 57 54.4
Lalb_Chr05g0222651 Lupinus albus HOM05D000522 ORTHO05D004380 2.5e-08 62.4 69 50.7
MD15G1189500 Malus domestica HOM05D000522 ORTHO05D004380 2.5e-08 62.4 69 49.3
Carub.0007s2921 Capsella rubella HOM05D000522 ORTHO05D004380 3.3e-08 62.0 57 54.4
Duzib187G0776 Durio zibethinus HOM05D000522 ORTHO05D004380 3.3e-08 62.0 69 49.3
Lsat_1_v5_gn_8_94761 Lactuca sativa HOM05D000522 ORTHO05D004380 3.3e-08 62.0 76 46.1
Ah.09g227710 Amaranthus hybridus HOM05D000522 ORTHO05D004380 5.7e-08 61.2 69 46.4
Prupe.7G227300 Prunus persica HOM05D000522 ORTHO05D004380 5.7e-08 61.2 69 46.4
PGR102G1361 Punica granatum HOM05D000522 ORTHO05D004380 5.7e-08 61.2 69 52.2
Sabra06G0123500 Salix brachista HOM05D000522 ORTHO05D004380 5.7e-08 61.2 57 54.4
Sc08g0007180 Simmondsia chinensis HOM05D000522 ORTHO05D004380 5.7e-08 61.2 69 47.8
Thecc.09G114500 Theobroma cacao HOM05D000522 ORTHO05D004380 5.7e-08 61.2 69 49.3
Cpa.g.sc23.137 Carica papaya HOM05D000522 ORTHO05D004380 7.4e-08 60.8 69 47.8
Hund09185 Selenicereus undatus HOM05D000522 ORTHO05D004380 7.4e-08 60.8 69 49.3
MD02G1056500 Malus domestica HOM05D000522 ORTHO05D004380 9.7e-08 60.5 69 44.9
arahy.Tifrunner.gnm1.ann1.E6IMKI Arachis hypogaea HOM05D000522 ORTHO05D004380 1.3e-07 60.1 69 49.3
arahy.Tifrunner.gnm1.ann1.R702JB Arachis hypogaea HOM05D000522 ORTHO05D004380 1.3e-07 60.1 69 49.3
BcaB03g14587 Brassica carinata HOM05D000522 ORTHO05D004380 1.3e-07 60.1 69 46.4
AUR62033413 Chenopodium quinoa HOM05D000522 ORTHO05D004380 1.3e-07 60.1 69 47.8
DCAR_012089 Daucus carota HOM05D000522 ORTHO05D004380 1.3e-07 60.1 61 49.2
QL02p086054 Quercus lobata HOM05D000522 ORTHO05D004380 1.3e-07 60.1 69 46.4
BcaB03g16093 Brassica carinata HOM05D000522 ORTHO05D004380 1.7e-07 59.7 57 52.6
BcaC02g09431 Brassica carinata HOM05D000522 ORTHO05D004380 1.7e-07 59.7 57 52.6
C04p42550 Brassica napus HOM05D000522 ORTHO05D004380 1.7e-07 59.7 57 52.6
BolC4t25830H Brassica oleracea HOM05D000522 ORTHO05D004380 1.7e-07 59.7 57 52.6
ClCG11G002610 Citrullus lanatus HOM05D000522 ORTHO05D004380 1.7e-07 59.7 69 46.4
Gohir.A07G003600 Gossypium hirsutum HOM05D000522 ORTHO05D004380 1.7e-07 59.7 69 47.8
Lalb_Chr16g0387971 Lupinus albus HOM05D000522 ORTHO05D004380 2.2e-07 59.3 69 49.3
PSO782G3947 Papaver somniferum HOM05D000522 ORTHO05D004380 2.2e-07 59.3 69 44.9
Sed0015283 Sechium edule HOM05D000522 ORTHO05D004380 2.2e-07 59.3 69 44.9
THA.LOC104808747 Tarenaya hassleriana HOM05D000522 ORTHO05D004380 2.2e-07 59.3 69 46.4
vmacro08382 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 2.2e-07 59.3 51 58.8
A03p43630 Brassica napus HOM05D000522 ORTHO05D004380 2.8e-07 58.9 69 46.4
BraA04t16571Z Brassica rapa HOM05D000522 ORTHO05D004380 2.8e-07 58.9 57 52.6
Thhalv10002535m.g Eutrema salsugineum HOM05D000522 ORTHO05D004380 2.8e-07 58.9 69 44.9
FvH4_1g04450 Fragaria vesca HOM05D000522 ORTHO05D004380 2.8e-07 58.9 68 45.6
PSO063G3875 Papaver somniferum HOM05D000522 ORTHO05D004380 2.8e-07 58.9 69 44.9
Hund26120 Selenicereus undatus HOM05D000522 ORTHO05D004380 2.8e-07 58.9 77 48.1
Aa31LG9G4380 Aethionema arabicum HOM05D000522 ORTHO05D004380 3.7e-07 58.5 69 46.4
Sp3g22170 Schrenkiella parvula HOM05D000522 ORTHO05D004380 3.7e-07 58.5 69 44.9
BcaC01g03316 Brassica carinata HOM05D000522 ORTHO05D004380 4.8e-07 58.2 69 44.9
A04p08740 Brassica napus HOM05D000522 ORTHO05D004380 8.2e-07 57.4 57 50.9
BraA03t13500Z Brassica rapa HOM05D000522 ORTHO05D004380 8.2e-07 57.4 69 46.4
Aqoxy7G03774 Aquilegia oxysepala HOM05D000522 ORTHO05D004380 1.1e-06 57.0 62 46.8
CsaV3_2G002430 Cucumis sativus L. HOM05D000522 ORTHO05D004380 1.1e-06 57.0 69 44.9
Oeu055871.1 Olea europaea HOM05D000522 ORTHO05D004380 1.1e-06 57.0 49 63.3
C03p53740 Brassica napus HOM05D000522 ORTHO05D004380 1.4e-06 56.6 69 44.9
BolC3t17634H Brassica oleracea HOM05D000522 ORTHO05D004380 1.4e-06 56.6 69 44.9
TAR383G0974 Trochodendron aralioides HOM05D000522 ORTHO05D004380 1.4e-06 56.6 62 46.8
CARHR100460 Cardamine hirsuta HOM05D000522 ORTHO05D004380 1.8e-06 56.2 69 42.0
Carub.0003s2470 Capsella rubella HOM05D000522 ORTHO05D004380 2.4e-06 55.8 69 42.0
Aqoxy7G01827 Aquilegia oxysepala HOM05D000522 ORTHO05D004380 3.1e-06 55.5 62 45.2
MELO3C004545.2 Cucumis melo HOM05D000522 ORTHO05D004380 3.1e-06 55.5 53 52.8
Eucgr.C01076 Eucalyptus grandis HOM05D000522 ORTHO05D004380 4.1e-06 55.1 57 50.9
AL3G39830 Arabidopsis lyrata HOM05D000522 ORTHO05D004380 5.3e-06 54.7 69 42.0
AL9U10300 Arabidopsis lyrata HOM05D000522 ORTHO05D004380 5.3e-06 54.7 57 49.1
EL10Ac8g18536 Beta vulgaris HOM05D000522 ORTHO05D004380 5.3e-06 54.7 56 51.8


User provided reference genes

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