Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005199g0050 Nicotiana tabacum HOM05D001087 ORTHO05D005406 0.0e+00 1096.6 555 100.0
Nitab4.5_0000136g0080 Nicotiana tabacum HOM05D001087 ORTHO05D005406 1.0e-174 617.5 527 67.7
Sopen02g039270 Solanum pennellii HOM05D001087 ORTHO05D005406 5.3e-70 269.6 326 50.6
Solyc02g094610.1 Solanum lycopersicum HOM05D001087 ORTHO05D005406 1.5e-69 268.1 295 54.2
CAN.G473.166 Capsicum annuum HOM05D001087 ORTHO05D005406 4.9e-68 263.1 269 57.2
Nitab4.5_0002901g0060 Nicotiana tabacum HOM05D001087 ORTHO05D005406 1.1e-67 261.9 347 47.8
CSS0025073 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D005406 1.2e-50 205.3 222 51.4
Duzib138G0185 Durio zibethinus HOM05D001087 ORTHO05D005406 2.1e-50 204.5 245 46.5
Actinidia19533 Actinidia chinensis HOM05D001087 ORTHO05D005406 1.0e-49 202.2 295 40.7
AUR62032520 Chenopodium quinoa HOM05D001087 ORTHO05D005406 1.3e-49 201.8 365 35.6
QL02p063912 Quercus lobata HOM05D001087 ORTHO05D005406 1.8e-49 201.4 295 41.0
AUR62017451 Chenopodium quinoa HOM05D001087 ORTHO05D005406 2.3e-49 201.1 349 36.4
GSVIVG01032937001 Vitis vinifera HOM05D001087 ORTHO05D005406 3.3e-48 197.2 222 48.6
HanXRQChr17g0550851 Helianthus annuus HOM05D001087 ORTHO05D005406 5.6e-48 196.4 245 44.5
Lsat_1_v5_gn_3_103380 Lactuca sativa HOM05D001087 ORTHO05D005406 7.4e-48 196.1 222 46.4
CANSAT64G1951 Cannabis sativa HOM05D001087 ORTHO05D005406 9.6e-48 195.7 352 36.1
PSO017G2606 Papaver somniferum HOM05D001087 ORTHO05D005406 1.6e-47 194.9 295 41.0
Sc16g0004210 Simmondsia chinensis HOM05D001087 ORTHO05D005406 2.8e-47 194.1 295 39.3
PSO478G2418 Papaver somniferum HOM05D001087 ORTHO05D005406 3.7e-47 193.7 295 41.0
FvH4_6g54490 Fragaria vesca HOM05D001087 ORTHO05D005406 4.8e-47 193.4 294 39.1
Cpa.g.sc70.28 Carica papaya HOM05D001087 ORTHO05D005406 8.2e-47 192.6 272 41.9
Prupe.3G316100 Prunus persica HOM05D001087 ORTHO05D005406 1.4e-46 191.8 295 38.6
Aqoxy3G01996 Aquilegia oxysepala HOM05D001087 ORTHO05D005406 2.4e-46 191.0 295 39.3
COL.COLO4_13413 Corchorus olitorius HOM05D001087 ORTHO05D005406 2.4e-46 191.0 222 46.8
MD09G1000300 Malus domestica HOM05D001087 ORTHO05D005406 3.1e-46 190.7 295 38.6
Cc07_g01490 Coffea canephora HOM05D001087 ORTHO05D005406 5.3e-46 189.9 295 39.7
RcHm_v2.0_Chr2g0176781 Rosa chinensis HOM05D001087 ORTHO05D005406 5.3e-46 189.9 295 39.0
Thecc.04G053100 Theobroma cacao HOM05D001087 ORTHO05D005406 5.3e-46 189.9 295 39.3
Rhsim08G0036900 Rhododendron simsii HOM05D001087 ORTHO05D005406 6.9e-46 189.5 312 39.1
Lj1g0002000 Lotus japonicus HOM05D001087 ORTHO05D005406 1.5e-45 188.3 295 39.7
TPR.G31052 Trifolium pratense HOM05D001087 ORTHO05D005406 1.5e-45 188.3 295 39.7
Gohir.D08G048400 Gossypium hirsutum HOM05D001087 ORTHO05D005406 3.4e-45 187.2 295 38.6
Gorai.004G047900 Gossypium raimondii HOM05D001087 ORTHO05D005406 4.5e-45 186.8 295 38.6
MBI07_g11062_MAGBIO Magnolia biondii HOM05D001087 ORTHO05D005406 7.6e-45 186.0 295 40.0
Medtr7g084880 Medicago truncatula HOM05D001087 ORTHO05D005406 7.6e-45 186.0 222 46.8
Gohir.A08G038200 Gossypium hirsutum HOM05D001087 ORTHO05D005406 1.0e-44 185.7 295 38.6
Atru.chr6.2747 Acer truncatum HOM05D001087 ORTHO05D005406 1.3e-44 185.3 345 35.9
Ciclev10014134m.g Citrus clementina HOM05D001087 ORTHO05D005406 1.3e-44 185.3 295 40.0
Nn4g22026 Nelumbo nucifera HOM05D001087 ORTHO05D005406 1.3e-44 185.3 295 39.7
Hund04150 Selenicereus undatus HOM05D001087 ORTHO05D005406 1.3e-44 185.3 515 31.7
TAR629G2385 Trochodendron aralioides HOM05D001087 ORTHO05D005406 1.7e-44 184.9 301 39.5
Lalb_Chr14g0364241 Lupinus albus HOM05D001087 ORTHO05D005406 4.9e-44 183.3 295 38.6
VMungo1383G1594 Vigna mungo HOM05D001087 ORTHO05D005406 4.9e-44 183.3 295 39.7
Manes.04G095500 Manihot esculenta HOM05D001087 ORTHO05D005406 6.5e-44 183.0 222 45.9
Glyma.16G044400 Glycine max HOM05D001087 ORTHO05D005406 8.4e-44 182.6 295 39.3
Phvul.001G097600 Phaseolus vulgaris HOM05D001087 ORTHO05D005406 1.4e-43 181.8 295 39.0
CiPaw.03G079200 Carya illinoinensis HOM05D001087 ORTHO05D005406 1.9e-43 181.4 222 45.9
Sed0004915 Sechium edule HOM05D001087 ORTHO05D005406 1.9e-43 181.4 216 45.8
MELO3C014745.2 Cucumis melo HOM05D001087 ORTHO05D005406 2.5e-43 181.0 295 38.6
CsaV3_3G020140 Cucumis sativus L. HOM05D001087 ORTHO05D005406 2.5e-43 181.0 295 38.6
ATR0582G201 Amborella trichopoda HOM05D001087 ORTHO05D005406 3.2e-43 180.6 462 32.7
Potri.014G141100 Populus trichocarpa HOM05D001087 ORTHO05D005406 4.2e-43 180.3 295 39.0
ClCG05G012390 Citrullus lanatus HOM05D001087 ORTHO05D005406 5.5e-43 179.9 295 39.0
Glyma.19G107500 Glycine max HOM05D001087 ORTHO05D005406 9.3e-43 179.1 295 39.0
Migut.F00007 Erythranthe guttata HOM05D001087 ORTHO05D005406 1.2e-42 178.7 296 38.2
Ca_08243_v3 Cicer arietinum L. HOM05D001087 ORTHO05D005406 1.6e-42 178.3 295 39.0
ECA246G3450 Erigeron canadensis HOM05D001087 ORTHO05D005406 2.7e-42 177.6 212 45.3
Oeu062515.1 Olea europaea HOM05D001087 ORTHO05D005406 2.7e-42 177.6 295 37.6
arahy.Tifrunner.gnm1.ann1.C4QHPC Arachis hypogaea HOM05D001087 ORTHO05D005406 3.5e-42 177.2 222 45.9
arahy.Tifrunner.gnm1.ann1.65DI7F Arachis hypogaea HOM05D001087 ORTHO05D005406 1.8e-41 174.9 222 45.0
TWI32G0903 Tripterygium wilfordii HOM05D001087 ORTHO05D005406 1.9e-40 171.4 282 37.6
CDE05G0125 Ceratophyllum demersum HOM05D001087 ORTHO05D005406 1.3e-39 168.7 296 37.5
THA.LOC104805290 Tarenaya hassleriana HOM05D001087 ORTHO05D005406 2.2e-39 167.9 295 35.3
Thhalv10006676m.g Eutrema salsugineum HOM05D001087 ORTHO05D005406 3.1e-38 164.1 295 36.6
Eucgr.G01904 Eucalyptus grandis HOM05D001087 ORTHO05D005406 6.9e-38 162.9 218 42.7
AT1G12930 Arabidopsis thaliana HOM05D001087 ORTHO05D005406 2.6e-37 161.0 295 34.9
AL1G24570 Arabidopsis lyrata HOM05D001087 ORTHO05D005406 5.9e-37 159.8 216 42.1
A09p63520 Brassica napus HOM05D001087 ORTHO05D005406 5.9e-37 159.8 295 35.3
FAN14G5757 Fragaria x ananassa HOM05D001087 ORTHO05D005406 5.9e-37 159.8 189 47.6
Aa31LG1G1850 Aethionema arabicum HOM05D001087 ORTHO05D005406 7.7e-37 159.5 216 41.7
BraA09t41703Z Brassica rapa HOM05D001087 ORTHO05D005406 7.7e-37 159.5 295 35.3
Zm00001eb197740 Zea mays HOM05D001087 ORTHO05D005406 7.7e-37 159.5 345 33.3
Carub.0001s1270 Capsella rubella HOM05D001087 ORTHO05D005406 1.0e-36 159.1 216 42.1
BcaB08g34240 Brassica carinata HOM05D001087 ORTHO05D005406 1.3e-36 158.7 295 35.3
Ah.02g128690 Amaranthus hybridus HOM05D001087 ORTHO05D005406 1.7e-36 158.3 374 32.1
Sp1g11500 Schrenkiella parvula HOM05D001087 ORTHO05D005406 2.9e-36 157.5 295 34.9
C08p47020 Brassica napus HOM05D001087 ORTHO05D005406 3.8e-36 157.1 295 35.3
BolC8t52241H Brassica oleracea HOM05D001087 ORTHO05D005406 1.9e-35 154.8 295 34.9
SGA_v2.0_scaffold44G16961 Striga asiatica HOM05D001087 ORTHO05D005406 3.2e-35 154.1 240 40.8
vmacro22106 Vaccinium macrocarpon HOM05D001087 ORTHO05D005406 1.2e-34 152.1 263 38.8
HPP92_021688 Vanilla planifolia HOM05D001087 ORTHO05D005406 2.7e-34 151.0 460 30.7
MSTRG.3036 Avicennia marina HOM05D001087 ORTHO05D005406 1.0e-33 149.1 296 34.8
HPP92_021716 Vanilla planifolia HOM05D001087 ORTHO05D005406 5.1e-33 146.7 261 37.5
PGR042G1457 Punica granatum HOM05D001087 ORTHO05D005406 7.4e-32 142.9 295 34.2
SalBow4G1044 Salvia bowleyana HOM05D001087 ORTHO05D005406 3.1e-30 137.5 431 27.8
EL10Ac6g13922 Beta vulgaris HOM05D001087 ORTHO05D005406 4.1e-30 137.1 334 31.1
Psat0s4626g0040 Pisum sativum HOM05D001087 ORTHO05D005406 5.3e-30 136.7 136 54.4
FAN27G2264 Fragaria x ananassa HOM05D001087 ORTHO05D005406 1.5e-29 135.2 219 36.5
Lj7A620G39 Lonicera japonica HOM05D001087 ORTHO05D005406 1.0e-28 132.5 190 45.3
FAN05G2313 Fragaria x ananassa HOM05D001087 ORTHO05D005406 5.0e-28 130.2 219 34.2
Sabra14G0106400 Salix brachista HOM05D001087 ORTHO05D005406 4.2e-27 127.1 221 40.3
Mapoly0055s0098 Marchantia polymorpha HOM05D001087 ORTHO05D005406 5.1e-25 120.2 211 34.1
BcaC05g25140 Brassica carinata HOM05D001087 ORTHO05D005406 2.6e-24 117.9 177 40.1
HPP92_021631 Vanilla planifolia HOM05D001087 ORTHO05D005406 1.3e-23 115.5 261 32.6
Peaxi162Scf00420g00935 Petunia axillaris HOM05D001087 ORTHO05D005406 7.0e-22 109.8 169 41.4
Pp3c14_8290 Physcomitrium patens HOM05D001087 ORTHO05D005406 1.2e-21 109.0 215 30.2
Pp3c14_8293 Physcomitrium patens HOM05D001087 ORTHO05D005406 1.2e-21 109.0 215 30.2
Pp3c10_7760 Physcomitrium patens HOM05D001087 ORTHO05D005406 4.5e-21 107.1 231 29.4
Nitab4.5_0000519g0380 Nicotiana tabacum HOM05D001087 ORTHO05D005406 6.5e-20 103.2 150 42.7
C05p10320 Brassica napus HOM05D001087 ORTHO05D005406 7.2e-19 99.8 253 30.8
A06p08730 Brassica napus HOM05D001087 ORTHO05D005406 2.1e-18 98.2 216 31.9
Haze_14337 Corylus avellana HOM05D001087 ORTHO05D005406 2.1e-18 98.2 94 54.3
Glyma.04G126700 Glycine max HOM05D001087 ORTHO05D005406 3.9e-17 94.0 141 39.7
Thhalv10017610m.g Eutrema salsugineum HOM05D001087 ORTHO05D005406 7.4e-16 89.7 248 29.4
DCAR_000957 Daucus carota HOM05D001087 ORTHO05D005406 9.7e-16 89.4 199 31.7
SMO353G0092 Selaginella moellendorffii HOM05D001087 ORTHO05D005406 2.2e-15 88.2 218 29.8
Glyma.09G128151 Glycine max HOM05D001087 ORTHO05D005406 3.5e-13 80.9 121 39.7
Nitab4.5_0000534g0050 Nicotiana tabacum HOM05D002374 ORTHO05D284804 3.5e-13 80.9 192 32.8
BcaC05g25411 Brassica carinata HOM05D001087 ORTHO05D005406 4.7e-10 70.5 119 35.3
SEGI_07003 Sequoiadendron giganteum HOM05D001087 ORTHO05D005406 4.7e-10 70.5 163 32.5
CBR_g30317 Chara braunii HOM05D001087 ORTHO05D005406 1.2e-08 65.9 220 21.8
Haze_14336 Corylus avellana HOM05D001087 ORTHO05D005406 2.6e-08 64.7 96 38.5
CAN.G567.105 Capsicum annuum HOM05D000513 ORTHO05D004203 2.2e-07 61.6 76 43.4
Nitab4.5_0006737g0030 Nicotiana tabacum HOM05D001291 ORTHO05D286391 2.8e-07 61.2 114 40.4
Peaxi162Scf00074g00132 Petunia axillaris HOM05D000513 ORTHO05D004203 3.7e-07 60.8 76 43.4
Solyc08g083320.4 Solanum lycopersicum HOM05D000513 ORTHO05D004203 6.3e-07 60.1 76 42.1
Sopen08g031530 Solanum pennellii HOM05D000513 ORTHO05D004203 6.3e-07 60.1 76 42.1
PGSC0003DMG400012111 Solanum tuberosum HOM05D000513 ORTHO05D004203 8.3e-07 59.7 76 42.1
MSTRG.24867 Avicennia marina HOM05D000513 ORTHO05D004203 1.8e-06 58.5 76 42.1
CiPaw.12G075900 Carya illinoinensis HOM05D000513 ORTHO05D004203 9.1e-06 56.2 76 38.2
Oeu042856.2 Olea europaea HOM05D000513 ORTHO05D004203 9.1e-06 56.2 88 36.4


User provided reference genes

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