Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 3.1e-107 391.7 189 100.0
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 1.8e-94 349.4 171 97.7
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 1.9e-88 329.3 171 90.6
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 1.5e-85 319.7 172 86.0
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 8.3e-84 313.9 168 86.3
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 1.3e-68 263.5 163 74.8
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 8.3e-68 260.8 171 76.6
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 1.1e-67 260.4 173 72.3
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 2.4e-67 259.2 164 72.6
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 4.1e-67 258.5 152 79.6
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 5.4e-67 258.1 159 75.5
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 7.0e-67 257.7 159 75.5
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 9.2e-67 257.3 162 73.5
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 1.2e-66 256.9 168 71.4
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 1.6e-66 256.5 164 73.8
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 2.0e-66 256.1 159 74.2
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 2.7e-66 255.8 165 73.3
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 3.5e-66 255.4 162 73.5
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 4.6e-66 255.0 174 70.7
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 6.0e-66 254.6 160 73.8
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 7.8e-66 254.2 173 70.5
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 1.0e-65 253.8 163 73.0
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 1.3e-65 253.4 162 72.2
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 1.3e-65 253.4 165 72.1
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 1.3e-65 253.4 161 74.5
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 1.7e-65 253.1 156 75.0
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 2.3e-65 252.7 159 73.0
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 3.0e-65 252.3 159 74.2
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 3.0e-65 252.3 161 76.4
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 3.9e-65 251.9 159 74.2
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 5.0e-65 251.5 155 74.2
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 6.6e-65 251.1 169 71.6
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 8.6e-65 250.8 165 72.1
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 1.5e-64 250.0 161 72.7
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 4.3e-64 248.4 156 72.4
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 4.3e-64 248.4 156 72.4
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 7.3e-64 247.7 156 69.9
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 1.2e-63 246.9 165 68.5
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 1.6e-63 246.5 156 71.2
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 2.1e-63 246.1 156 71.2
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 2.8e-63 245.7 162 70.4
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 3.6e-63 245.4 168 69.6
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 3.6e-63 245.4 156 71.8
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 4.7e-63 245.0 159 70.4
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 4.7e-63 245.0 156 72.4
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 4.7e-63 245.0 156 72.4
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 4.7e-63 245.0 158 70.9
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 6.2e-63 244.6 158 73.4
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 6.2e-63 244.6 158 73.4
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 6.2e-63 244.6 158 74.1
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 8.0e-63 244.2 156 71.8
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 8.0e-63 244.2 158 73.4
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 1.1e-62 243.8 156 70.5
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 1.1e-62 243.8 156 71.8
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 1.1e-62 243.8 156 73.7
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 1.1e-62 243.8 165 70.3
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 1.4e-62 243.4 152 73.0
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 1.4e-62 243.4 159 72.3
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 1.4e-62 243.4 153 76.5
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 3.1e-62 242.3 151 75.5
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 4.0e-62 241.9 160 73.8
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 4.0e-62 241.9 168 70.2
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 5.2e-62 241.5 168 69.6
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 6.8e-62 241.1 168 66.1
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 6.8e-62 241.1 158 72.8
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.6e-61 239.2 158 72.2
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 4.4e-61 238.4 167 67.7
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 5.8e-61 238.0 149 73.2
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 7.5e-61 237.7 178 60.1
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 1.3e-60 236.9 168 68.5
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 1.7e-60 236.5 156 70.5
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 2.2e-60 236.1 155 72.3
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 2.2e-60 236.1 163 66.9
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 2.9e-60 235.7 154 72.1
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 4.9e-60 235.0 161 66.5
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 2.4e-59 232.6 156 67.9
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 3.2e-59 232.3 161 66.5
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 3.2e-59 232.3 152 69.7
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 4.1e-59 231.9 157 70.7
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 5.4e-59 231.5 162 64.8
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 2.1e-58 229.6 162 66.0
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 2.7e-58 229.2 202 57.4
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 3.5e-58 228.8 167 65.9
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 4.6e-58 228.4 144 72.9
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 4.6e-58 228.4 169 65.7
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 1.7e-57 226.5 163 66.9
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 5.1e-57 224.9 144 71.5
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 6.8e-54 214.5 167 64.1
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 1.5e-53 213.4 185 60.0
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 3.2e-51 205.7 160 59.4
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 1.5e-48 196.8 121 76.9
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 7.3e-48 194.5 129 69.8
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 9.5e-48 194.1 150 58.7
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 4.7e-47 191.8 177 57.6
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 1.3e-44 183.7 121 69.4
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 1.7e-44 183.3 132 65.2
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 1.7e-44 183.3 135 64.4
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 5.1e-41 171.8 152 56.6
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 6.6e-41 171.4 161 50.9
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 9.3e-35 151.0 155 51.0
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 3.5e-34 149.1 149 50.3
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 5.1e-33 145.2 92 69.6
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.4e-30 136.3 89 74.2
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-30 136.3 91 65.9
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 1.2e-26 124.0 76 76.3
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 6.0e-26 121.7 114 55.3
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 4.3e-24 115.5 69 78.3
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 4.0e-14 82.4 43 88.4
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 3.8e-12 75.9 50 70.0
Medtr6g013805 Medicago truncatula HOM05D006982 ORTHO05D008909 1.6e-10 70.5 40 77.5
CSS0038093 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 1.8e-09 67.0 37 81.1
Lj4A116T81 Lonicera japonica HOM05D006982 ORTHO05D008909 5.1e-09 65.5 40 70.0
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 1.6e-07 60.5 58 51.7
SHI03749 Sapria himalayana HOM05D006982 ORTHO05D000001 1.1e-06 57.8 42 59.5


User provided reference genes

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