Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 3.3e-220 768.1 389 100.0
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 4.6e-198 694.5 443 82.8
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 3.8e-184 648.3 458 74.5
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 3.9e-181 638.3 453 76.2
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 3.1e-178 628.6 449 75.3
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 3.1e-178 628.6 451 75.4
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 3.4e-164 582.0 459 68.0
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 1.3e-163 580.1 456 69.3
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 8.3e-163 577.4 453 69.8
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 1.1e-162 577.0 453 69.5
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 1.8e-162 576.2 457 67.2
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 4.1e-162 575.1 460 68.5
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 1.6e-161 573.2 454 69.8
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 1.6e-161 573.2 451 68.3
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 2.7e-161 572.4 472 65.7
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 3.5e-161 572.0 456 68.0
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 4.5e-161 571.6 457 67.8
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 7.7e-161 570.9 458 67.9
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 1.0e-160 570.5 458 68.1
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.7e-160 569.7 456 68.0
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.9e-160 568.9 474 65.8
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 3.8e-160 568.5 455 67.9
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.9e-159 566.2 456 67.5
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 1.9e-159 566.2 474 65.8
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 2.5e-159 565.8 459 66.9
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 4.2e-159 565.1 456 68.6
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 7.2e-159 564.3 454 67.8
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 9.4e-159 563.9 456 67.5
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 9.4e-159 563.9 457 67.4
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 1.6e-158 563.1 454 67.6
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.1e-158 562.8 454 67.6
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 3.6e-158 562.0 456 67.3
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 4.7e-158 561.6 456 67.3
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 1.4e-157 560.1 461 66.8
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 1.8e-157 559.7 456 66.2
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 2.3e-157 559.3 456 66.9
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 2.3e-157 559.3 457 67.0
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 8.8e-157 557.4 457 66.3
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 1.5e-156 556.6 457 66.5
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 1.5e-156 556.6 461 66.6
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 2.0e-156 556.2 456 66.9
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 3.4e-156 555.4 456 65.4
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 3.4e-156 555.4 456 66.9
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 4.4e-156 555.1 456 66.9
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 9.8e-156 553.9 456 66.4
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.3e-155 553.5 457 65.9
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 1.7e-155 553.1 456 66.9
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 2.2e-155 552.7 456 67.1
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 2.2e-155 552.7 456 67.5
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 3.7e-155 552.0 456 66.0
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 8.3e-155 550.8 455 67.3
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.1e-154 550.4 426 68.8
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 1.1e-154 550.4 457 66.5
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 2.4e-154 549.3 458 65.9
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 2.4e-154 549.3 411 70.8
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 3.1e-154 548.9 464 65.3
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 5.4e-154 548.1 456 66.0
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 1.2e-153 547.0 461 65.1
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.2e-153 547.0 456 65.6
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 1.6e-153 546.6 465 64.9
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 2.0e-153 546.2 464 64.4
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 2.0e-153 546.2 456 65.6
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 3.5e-153 545.4 461 64.9
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 5.9e-153 544.7 462 66.2
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 1.3e-152 543.5 454 65.6
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 2.3e-152 542.7 454 65.6
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 3.8e-152 542.0 424 68.4
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 3.8e-152 542.0 457 65.4
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 5.0e-152 541.6 464 64.2
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 8.6e-152 540.8 404 70.0
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 1.1e-151 540.4 442 65.8
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.9e-151 539.7 382 73.8
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 2.5e-151 539.3 404 71.5
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 2.5e-151 539.3 460 64.8
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 1.6e-150 536.6 461 65.9
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 1.6e-150 536.6 464 63.4
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 1.8e-149 533.1 459 65.8
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 2.3e-149 532.7 473 63.2
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 5.2e-149 531.6 414 67.9
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 1.7e-147 526.6 457 62.8
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 4.9e-147 525.0 457 62.6
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 4.5e-145 518.5 388 69.1
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 1.3e-144 516.9 468 61.8
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 5.0e-144 515.0 522 58.4
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 8.6e-144 514.2 355 75.2
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 3.1e-141 505.8 362 73.2
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 5.2e-141 505.0 372 71.2
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 6.8e-141 504.6 353 75.1
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 9.2e-138 494.2 356 73.3
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 3.9e-136 488.8 370 70.0
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.6e-134 482.3 454 61.0
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 1.2e-132 477.2 454 60.8
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 2.0e-132 476.5 401 63.3
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 8.3e-131 471.1 278 84.5
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 1.1e-125 454.1 454 56.6
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 3.1e-125 452.6 332 72.6
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 4.4e-124 448.7 332 72.0
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 5.8e-124 448.4 299 76.6
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 1.7e-123 446.8 382 61.0
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 4.1e-122 442.2 303 73.9
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 1.2e-121 440.7 447 55.5
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 2.1e-121 439.9 367 67.0
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.9e-119 433.3 227 89.9
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.9e-119 433.3 227 89.9
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 3.1e-117 426.0 302 70.9
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 5.8e-116 421.8 390 57.7
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 8.4e-107 391.3 366 60.4
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 6.2e-102 375.2 407 50.9
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 2.8e-94 349.7 279 67.7
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 7.9e-89 331.6 310 62.3
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 9.6e-87 324.7 320 57.5
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 1.3e-83 314.3 289 53.6
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.1e-66 258.1 289 47.1
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 1.7e-54 217.6 238 57.6
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 1.6e-49 201.1 288 42.4
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.9e-42 177.6 279 38.7
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.2e-41 174.9 299 37.5
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 7.5e-39 165.6 151 58.9
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 9.8e-39 165.2 150 57.3
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 8.6e-35 152.1 218 39.9
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 4.0e-32 143.3 217 38.2
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 1.6e-28 131.3 225 32.9
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 9.8e-23 112.1 106 64.2
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 7.8e-20 102.4 51 86.3
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 5.0e-19 99.8 57 86.0
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.9e-18 97.8 58 84.5
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.6e-15 87.4 53 81.1
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 2.1e-09 67.8 52 78.8
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 4.0e-08 63.5 160 26.9
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 1.2e-07 62.0 91 46.2
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 6.4e-06 56.2 48 60.4
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 6.4e-06 56.2 48 60.4


User provided reference genes

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