Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.3e-128 463.0 223 100.0
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.0e-125 453.4 223 97.8
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 1.6e-110 402.9 226 85.0
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 2.7e-110 402.1 228 85.5
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 5.1e-109 397.9 217 88.0
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 9.7e-108 393.7 217 87.1
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 1.7e-91 339.7 185 87.6
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 1.4e-90 336.7 224 70.5
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 7.0e-90 334.3 194 84.5
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 7.7e-89 330.9 226 69.0
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 1.0e-88 330.5 229 67.2
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 1.3e-88 330.1 211 71.1
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 1.9e-87 326.2 221 67.0
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 1.5e-84 316.6 222 65.8
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 2.6e-84 315.8 223 65.0
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 7.5e-84 314.3 210 68.6
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 2.2e-83 312.8 225 64.4
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 2.8e-83 312.4 221 66.1
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 1.1e-82 310.5 212 66.0
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 1.4e-82 310.1 214 67.3
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.4e-82 310.1 210 67.6
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 1.8e-82 309.7 219 63.9
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 1.8e-82 309.7 210 67.1
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 1.8e-82 309.7 216 68.5
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 3.1e-82 308.9 206 68.9
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 4.1e-82 308.5 210 68.1
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 7.0e-82 307.8 216 67.1
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 9.1e-82 307.4 223 64.1
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 1.6e-81 306.6 221 64.7
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 2.7e-81 305.8 206 69.9
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 4.5e-81 305.1 222 63.1
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 4.5e-81 305.1 223 64.1
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 4.5e-81 305.1 223 64.1
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 4.5e-81 305.1 210 63.8
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 7.7e-81 304.3 221 64.7
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 7.7e-81 304.3 231 62.8
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 7.7e-81 304.3 216 65.7
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 7.7e-81 304.3 216 65.7
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 7.7e-81 304.3 224 64.3
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 7.7e-81 304.3 226 63.3
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 1.0e-80 303.9 223 63.7
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 1.3e-80 303.5 230 61.3
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 1.7e-80 303.1 211 65.4
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 1.7e-80 303.1 218 64.2
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 2.9e-80 302.4 225 64.0
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 3.8e-80 302.0 212 63.7
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 6.5e-80 301.2 208 65.9
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 8.5e-80 300.8 206 67.5
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 1.1e-79 300.4 216 66.2
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 1.1e-79 300.4 212 67.0
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 5.5e-79 298.1 211 64.9
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 7.2e-79 297.7 214 64.0
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 1.2e-78 297.0 216 65.7
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 1.6e-78 296.6 209 65.6
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 3.6e-78 295.4 218 64.2
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 1.8e-77 293.1 221 58.4
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 2.3e-77 292.7 218 59.2
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 2.3e-77 292.7 213 58.7
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 5.2e-77 291.6 204 67.2
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 6.8e-77 291.2 202 63.9
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 2.0e-76 289.7 203 66.0
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 2.0e-76 289.7 219 60.7
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 2.6e-76 289.3 213 59.2
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 2.6e-76 289.3 206 60.2
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 2.6e-76 289.3 210 64.3
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 3.4e-76 288.9 221 58.8
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 2.2e-75 286.2 211 62.6
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 2.4e-74 282.7 210 62.9
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 7.0e-74 281.2 210 63.8
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 2.0e-73 279.6 223 56.5
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 2.7e-73 279.3 229 55.5
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 3.5e-73 278.9 229 55.5
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 2.3e-72 276.2 209 62.7
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 5.0e-72 275.0 235 53.6
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 3.3e-71 272.3 208 60.1
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 2.1e-70 269.6 212 61.8
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 4.7e-70 268.5 222 60.8
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 1.8e-69 266.5 206 60.7
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 8.9e-69 264.2 216 57.9
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 6.4e-67 258.1 222 57.2
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 1.8e-66 256.5 196 60.2
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 1.8e-66 256.5 219 57.1
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 7.0e-66 254.6 248 54.0
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 2.0e-65 253.1 214 57.0
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 3.9e-64 248.8 197 61.9
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 2.5e-63 246.1 159 69.2
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 1.8e-61 240.0 163 70.6
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 3.7e-59 232.3 179 62.6
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 1.4e-58 230.3 172 62.8
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 9.2e-58 227.6 188 60.1
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 2.0e-57 226.5 170 58.8
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 5.0e-56 221.9 217 49.3
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 8.6e-56 221.1 163 66.9
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 4.3e-55 218.8 198 52.0
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 1.6e-54 216.9 239 48.1
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 3.6e-54 215.7 172 55.8
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 3.5e-49 199.1 208 46.2
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 2.3e-48 196.4 176 49.4
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 8.6e-48 194.5 133 67.7
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 7.1e-42 174.9 200 44.5
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 1.7e-40 170.2 105 72.4
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 1.7e-40 170.2 212 41.5
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 8.1e-30 134.8 162 46.3
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 1.4e-26 124.0 95 62.1
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 7.1e-26 121.7 81 69.1
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 1.5e-23 114.0 77 58.4
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 1.4e-18 97.4 88 48.9
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 7.9e-17 91.7 87 49.4
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 3.8e-11 72.8 92 40.2
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.5e-07 60.8 59 50.8


User provided reference genes

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