Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005195g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 3.1e-139 498.4 247 100.0
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.2e-95 353.6 266 72.2
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 6.8e-86 321.2 269 67.7
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 1.2e-71 273.9 262 56.9
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 2.1e-71 273.1 261 57.9
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 5.6e-64 248.4 253 58.1
Nitab4.5_0000826g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 7.3e-64 248.1 160 81.9
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 1.2e-47 194.1 261 42.9
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 5.2e-46 188.7 257 45.5
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 1.2e-42 177.6 264 39.4
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 4.6e-42 175.6 269 42.0
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 6.0e-42 175.3 273 41.0
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 5.1e-41 172.2 261 38.7
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 5.6e-40 168.7 268 39.6
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 1.3e-39 167.5 257 41.2
SalBow1G4167 Salvia bowleyana HOM05D007529 ORTHO05D007451 2.8e-39 166.4 257 40.5
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 3.8e-36 156.0 255 36.9
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 4.9e-36 155.6 254 37.8
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 8.4e-36 154.8 181 43.1
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 1.9e-35 153.7 257 38.1
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 7.1e-35 151.8 247 38.9
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 1.2e-34 151.0 262 35.9
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 1.2e-34 151.0 267 40.4
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 3.5e-34 149.4 254 36.2
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 3.5e-34 149.4 260 36.2
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 7.9e-34 148.3 268 36.2
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 1.0e-33 147.9 268 36.2
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 8.7e-33 144.8 264 36.7
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 1.9e-32 143.7 260 36.2
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 7.3e-32 141.7 259 37.5
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 1.5e-29 134.0 255 33.7
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 2.0e-29 133.7 258 33.3
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 2.6e-29 133.3 249 36.5
Nn1g04791 Nelumbo nucifera HOM05D007529 ORTHO05D007451 3.4e-29 132.9 249 34.9
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 5.8e-29 132.1 288 31.2
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 5.8e-29 132.1 271 33.6
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 2.9e-28 129.8 255 33.3
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 4.9e-28 129.0 257 35.8
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 8.4e-28 128.3 259 35.9
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 8.4e-28 128.3 259 34.0
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.1e-27 127.9 259 32.0
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 1.1e-27 127.9 253 31.2
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.4e-27 126.7 269 34.6
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 3.2e-27 126.3 254 34.3
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 4.2e-27 125.9 269 33.8
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 5.5e-27 125.6 257 31.9
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 7.1e-27 125.2 289 30.4
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 9.3e-27 124.8 261 34.1
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 2.1e-26 123.6 253 30.4
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 2.1e-26 123.6 250 31.6
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.5e-26 122.9 261 34.1
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 7.9e-26 121.7 281 32.7
CiPaw.09G042800 Carya illinoinensis HOM05D007529 ORTHO05D007451 1.0e-25 121.3 261 36.0
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 6.7e-25 118.6 251 32.3
Haze_19770 Corylus avellana HOM05D007529 ORTHO05D007451 8.7e-25 118.2 190 38.9
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 8.7e-25 118.2 239 35.6
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 2.5e-24 116.7 224 35.7
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 3.3e-24 116.3 265 33.2
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.3e-24 116.3 250 34.0
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 4.3e-24 115.9 269 32.7
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 5.6e-24 115.5 282 28.7
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 5.6e-24 115.5 261 31.0
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 7.4e-24 115.2 273 31.9
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 1.6e-23 114.0 256 33.6
FvH4_2g38461 Fragaria vesca HOM05D007529 ORTHO05D007451 6.2e-23 112.1 192 37.5
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 2.4e-22 110.2 266 31.2
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 5.3e-22 109.0 272 29.8
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 5.3e-22 109.0 184 37.0
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.0e-21 107.1 186 35.5
Ciclev10006854m.g Citrus clementina HOM05D007529 ORTHO05D007451 1.7e-20 104.0 245 33.9
DCAR_013619 Daucus carota HOM05D007529 ORTHO05D007451 3.8e-20 102.8 261 31.4
unitig_899.g15088 Utricularia gibba HOM05D007529 ORTHO05D007451 8.4e-20 101.7 209 37.8
CDE11G0566 Ceratophyllum demersum HOM05D007529 ORTHO05D007451 7.1e-19 98.6 187 31.6
Aqoxy7G01198 Aquilegia oxysepala HOM05D007529 ORTHO05D007451 7.9e-18 95.1 197 30.5
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 1.0e-17 94.7 213 30.0
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 3.9e-17 92.8 254 31.5
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 5.1e-17 92.4 257 28.0
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 5.1e-17 92.4 257 28.8
Sabra04G0050900 Salix brachista HOM05D007529 ORTHO05D007451 8.7e-17 91.7 200 29.5
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 1.5e-16 90.9 267 30.0
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 8.2e-15 85.1 255 26.7
Potri.004G077301 Populus trichocarpa HOM05D007529 ORTHO05D007451 8.2e-15 85.1 172 30.2
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 3.4e-13 79.7 257 25.3
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 4.5e-13 79.3 208 31.7
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 3.8e-12 76.3 258 26.0
THA.LOC104825174 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 1.1e-11 74.7 147 32.0
AUR62026141 Chenopodium quinoa HOM05D007529 ORTHO05D007451 2.5e-11 73.6 144 35.4
Aa31LG6G5360 Aethionema arabicum HOM05D005503 ORTHO05D007451 7.2e-11 72.0 267 25.8
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 9.3e-11 71.6 255 24.7
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 7.9e-10 68.6 129 34.1
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 6.7e-09 65.5 254 26.0
FAN12G3498 Fragaria x ananassa HOM05D007529 ORTHO05D007451 8.7e-09 65.1 96 34.4
Oeu026328.1 Olea europaea HOM05D000056 ORTHO05D000019 1.5e-08 64.3 138 31.9
BcaC07g40948 Brassica carinata HOM05D005503 ORTHO05D007451 2.5e-08 63.5 254 26.0
BolC8t51514H Brassica oleracea HOM05D005503 ORTHO05D007451 2.5e-08 63.5 254 26.0
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 3.7e-07 59.7 253 24.5
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 3.7e-07 59.7 253 24.5
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 3.7e-07 59.7 251 27.1
SEGI_22599 Sequoiadendron giganteum HOM05D007529 ORTHO05D007451 4.8e-07 59.3 169 26.6
FvH4_4g15602 Fragaria vesca HOM05D007529 ORTHO05D007451 6.3e-07 58.9 167 31.1
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.1e-06 58.2 250 26.8
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 1.1e-06 58.2 127 32.3
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.4e-06 57.8 250 26.8
Os01g0800900 Oryza sativa ssp. japonica HOM05D007529 ORTHO05D007451 2.4e-06 57.0 265 23.0
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 3.1e-06 56.6 253 24.9
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 3.1e-06 56.6 257 21.8
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 6.9e-06 55.5 252 25.4
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 9.0e-06 55.1 254 24.0
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 9.0e-06 55.1 253 24.5
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 9.0e-06 55.1 253 24.9
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 9.0e-06 55.1 253 24.9
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 9.0e-06 55.1 252 23.0


User provided reference genes

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