Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 7.3e-40 166.8 85 100.0
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 8.4e-36 153.3 82 91.5
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 8.4e-36 153.3 82 91.5
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 2.4e-35 151.8 82 93.9
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 2.4e-35 151.8 82 93.9
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 3.2e-35 151.4 85 89.4
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 4.2e-35 151.0 82 90.2
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 2.1e-31 138.7 89 79.8
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 1.4e-30 136.0 82 81.7
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 1.8e-30 135.6 89 76.4
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.8e-30 135.6 79 86.1
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.4e-30 135.2 82 81.7
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.1e-30 134.8 82 80.5
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 3.1e-30 134.8 82 80.5
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 5.3e-30 134.0 82 79.3
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 5.3e-30 134.0 80 82.5
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 6.9e-30 133.7 82 82.9
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 9.0e-30 133.3 84 78.6
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 9.0e-30 133.3 79 84.8
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 9.0e-30 133.3 82 79.3
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 9.0e-30 133.3 81 80.2
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.2e-29 132.9 83 79.5
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 1.5e-29 132.5 84 75.0
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 2.0e-29 132.1 88 75.0
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 2.0e-29 132.1 83 79.5
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 2.6e-29 131.7 89 74.2
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 2.6e-29 131.7 83 79.5
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 2.6e-29 131.7 81 80.2
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 3.4e-29 131.3 89 75.3
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 4.5e-29 131.0 79 79.7
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 4.5e-29 131.0 79 79.7
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 5.8e-29 130.6 84 76.2
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 5.8e-29 130.6 84 76.2
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 7.6e-29 130.2 82 76.8
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 7.6e-29 130.2 82 78.0
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 7.6e-29 130.2 80 82.5
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 9.9e-29 129.8 82 79.3
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 9.9e-29 129.8 81 77.8
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 1.3e-28 129.4 86 77.9
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 1.7e-28 129.0 79 82.3
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 2.2e-28 128.6 79 81.0
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 2.2e-28 128.6 84 75.0
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 2.9e-28 128.3 89 71.9
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 2.9e-28 128.3 82 75.6
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 2.9e-28 128.3 82 75.6
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 3.8e-28 127.9 88 72.7
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 3.8e-28 127.9 82 76.8
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 8.4e-28 126.7 85 75.3
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 1.1e-27 126.3 89 70.8
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 1.1e-27 126.3 89 69.7
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 1.4e-27 125.9 79 79.7
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 1.4e-27 125.9 83 77.1
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.9e-27 125.6 79 78.5
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 1.9e-27 125.6 82 73.2
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.4e-27 125.2 85 74.1
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 2.4e-27 125.2 85 74.1
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.4e-27 125.2 85 74.1
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 2.4e-27 125.2 84 75.0
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 3.2e-27 124.8 79 77.2
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 3.2e-27 124.8 79 77.2
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 3.2e-27 124.8 79 77.2
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 3.2e-27 124.8 79 77.2
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 3.2e-27 124.8 79 77.2
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 3.2e-27 124.8 79 77.2
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 3.2e-27 124.8 79 77.2
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 3.2e-27 124.8 86 74.4
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 3.2e-27 124.8 82 75.6
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 4.2e-27 124.4 82 75.6
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 4.2e-27 124.4 79 75.9
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 5.5e-27 124.0 84 76.2
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 5.5e-27 124.0 79 78.5
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 5.5e-27 124.0 82 74.4
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 5.5e-27 124.0 83 75.9
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 7.1e-27 123.6 82 75.6
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 9.3e-27 123.2 79 78.5
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 1.2e-26 122.9 81 75.3
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 1.2e-26 122.9 79 75.9
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.6e-26 122.5 86 72.1
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 2.1e-26 122.1 79 73.4
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 2.7e-26 121.7 84 73.8
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 3.5e-26 121.3 82 72.0
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 3.5e-26 121.3 86 72.1
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 4.6e-26 120.9 82 70.7
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 4.6e-26 120.9 89 69.7
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 4.6e-26 120.9 82 76.8
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 6.0e-26 120.6 82 74.4
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 6.0e-26 120.6 82 72.0
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 7.9e-26 120.2 79 79.7
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 7.9e-26 120.2 80 76.2
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 7.9e-26 120.2 86 74.4
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.0e-25 119.8 88 71.6
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 1.3e-25 119.4 82 73.2
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 3.0e-25 118.2 89 68.5
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 3.0e-25 118.2 82 70.7
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 5.1e-25 117.5 87 67.8
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 6.7e-25 117.1 82 68.3
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 3.3e-24 114.8 84 70.2
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 5.6e-24 114.0 83 71.1
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 2.8e-23 111.7 79 69.6
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 1.4e-22 109.4 82 68.3
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.8e-22 109.0 82 72.0
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 2.4e-22 108.6 79 68.4
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 3.1e-22 108.2 106 58.5
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 3.2e-19 98.2 60 78.3
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 1.9e-16 89.0 90 56.7
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.5e-16 88.6 52 78.8
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.8e-15 85.1 48 85.4
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 6.3e-15 84.0 53 71.7
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 8.2e-15 83.6 60 66.7
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 1.2e-13 79.7 89 58.4
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.0e-12 76.6 51 72.5
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 1.0e-12 76.6 80 56.2
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.7e-12 75.9 60 68.3
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 9.4e-11 70.1 43 74.4
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 2.1e-10 68.9 41 78.0
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 1.7e-07 59.3 41 70.7
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 2.8e-07 58.5 86 44.2
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 1.8e-06 55.8 36 77.8


User provided reference genes

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