Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.3e-151 539.7 261 100.0
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 1.7e-119 433.0 267 79.4
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 1.3e-116 423.3 266 77.8
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 1.7e-111 406.4 240 81.2
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 3.8e-95 352.1 215 73.5
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 6.5e-95 351.3 257 66.1
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 8.4e-95 350.9 249 67.5
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 1.9e-94 349.7 209 74.6
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 7.9e-93 344.4 262 65.3
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 1.3e-92 343.6 229 68.1
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 5.1e-92 341.7 213 78.4
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 3.3e-91 339.0 238 65.5
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 4.3e-91 338.6 201 73.6
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 4.3e-91 338.6 201 73.6
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 9.6e-91 337.4 251 64.5
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 2.1e-90 336.3 237 64.1
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 3.7e-90 335.5 219 68.5
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 4.8e-90 335.1 219 68.9
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 6.3e-90 334.7 227 68.3
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 1.1e-89 334.0 266 61.3
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 2.4e-89 332.8 221 67.9
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 6.9e-89 331.3 218 69.3
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 9.0e-89 330.9 224 66.1
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.2e-88 330.5 237 67.1
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 1.2e-88 330.5 235 65.1
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 2.6e-88 329.3 238 64.3
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 3.4e-88 328.9 209 69.4
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 5.9e-88 328.2 248 62.9
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 5.9e-88 328.2 235 64.7
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 1.0e-87 327.4 249 64.7
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 1.3e-87 327.0 259 60.6
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.7e-87 326.6 249 61.4
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 2.2e-87 326.2 226 64.6
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 2.2e-87 326.2 238 62.2
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 2.9e-87 325.9 208 69.2
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 2.9e-87 325.9 238 65.1
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 3.8e-87 325.5 216 69.0
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 8.4e-87 324.3 218 66.1
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 8.4e-87 324.3 208 68.8
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 1.9e-86 323.2 232 63.8
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 1.9e-86 323.2 203 70.0
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 1.9e-86 323.2 204 70.6
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 3.2e-86 322.4 218 67.9
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 4.2e-86 322.0 255 61.2
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 5.5e-86 321.6 198 72.7
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 7.2e-86 321.2 198 72.7
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 7.2e-86 321.2 222 66.2
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 7.2e-86 321.2 252 60.3
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 9.3e-86 320.9 221 66.5
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 1.2e-85 320.5 198 72.2
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 2.1e-85 319.7 227 64.3
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.0e-84 317.4 211 70.1
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 1.3e-84 317.0 219 63.5
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 1.8e-84 316.6 212 68.9
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 5.1e-84 315.1 251 60.6
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 6.7e-84 314.7 221 64.3
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 8.7e-84 314.3 251 58.6
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.1e-83 313.9 245 60.0
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.1e-83 313.9 250 59.6
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 1.5e-83 313.5 213 66.2
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 4.3e-83 312.0 210 67.6
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 4.3e-83 312.0 217 62.7
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 5.7e-83 311.6 221 66.1
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 7.4e-83 311.2 225 63.6
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 7.4e-83 311.2 221 65.2
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 7.4e-83 311.2 212 66.5
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 9.7e-83 310.8 244 61.9
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 1.6e-82 310.1 225 63.1
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 1.6e-82 310.1 238 59.7
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.4e-81 307.0 210 66.2
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 1.4e-81 307.0 216 65.3
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 4.1e-81 305.4 218 64.7
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 5.3e-81 305.1 240 62.1
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 6.9e-81 304.7 221 64.7
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 2.0e-80 303.1 201 67.2
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.5e-80 302.0 236 62.3
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 2.9e-79 299.3 237 60.3
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.5e-75 286.2 256 60.2
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 3.3e-75 285.8 195 67.2
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 8.2e-74 281.2 173 69.9
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 2.4e-73 279.6 210 61.9
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 9.1e-73 277.7 211 63.5
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 1.2e-72 277.3 161 73.3
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.4e-70 270.4 217 58.1
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.9e-70 270.0 217 58.5
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 1.9e-70 270.0 178 66.3
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 2.3e-68 263.1 211 59.7
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 7.4e-67 258.1 198 58.6
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 4.8e-66 255.4 175 65.1
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 3.1e-65 252.7 194 58.8
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 4.5e-64 248.8 245 50.6
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 1.0e-63 247.7 203 56.2
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 7.2e-62 241.5 177 66.7
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 5.2e-60 235.3 134 76.9
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.1e-59 234.2 166 63.9
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.0e-59 233.4 189 60.8
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 2.8e-58 229.6 190 60.0
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 5.9e-48 195.3 197 47.2
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 2.5e-46 189.9 121 71.9
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 6.1e-45 185.3 222 42.3
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 5.2e-44 182.2 101 85.1
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 8.8e-44 181.4 109 71.6
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 7.0e-41 171.8 104 69.2
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 1.7e-39 167.2 182 44.0
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 1.5e-35 154.1 93 67.7
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 5.6e-30 135.6 81 74.1
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 4.4e-27 125.9 88 64.8
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 6.2e-21 105.5 68 70.6
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 3.7e-18 96.3 54 77.8
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 8.3e-18 95.1 90 54.4
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 1.6e-16 90.9 60 70.0
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 1.1e-14 84.7 54 70.4
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 3.3e-14 83.2 67 52.2
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 2.3e-12 77.0 54 59.3
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.9e-09 67.4 65 49.2
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 2.4e-09 67.0 91 41.8
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 2.4e-09 67.0 91 41.8
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 2.4e-09 67.0 91 41.8
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 7.1e-09 65.5 90 41.1
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 1.6e-08 64.3 40 67.5
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 3.3e-06 56.6 34 61.8
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 9.6e-06 55.1 33 69.7


User provided reference genes

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