Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.9e-78 295.8 151 100.0
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 5.1e-68 261.2 157 88.5
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 3.0e-52 208.8 155 73.5
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 7.6e-48 194.1 156 68.6
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 3.2e-46 188.7 156 68.6
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 4.3e-43 178.3 159 67.3
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.5e-27 126.7 129 57.4
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 2.1e-21 106.3 154 46.1
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 8.8e-20 100.9 146 44.5
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 3.3e-19 99.0 161 45.3
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 4.4e-19 98.6 131 44.3
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 8.2e-18 94.4 126 42.1
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 5.3e-17 91.7 161 37.3
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 4.5e-16 88.6 125 46.4
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 1.0e-15 87.4 138 41.3
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 1.0e-15 87.4 134 35.8
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 2.2e-15 86.3 132 47.0
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 2.2e-15 86.3 114 44.7
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 2.9e-15 85.9 137 37.2
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 6.5e-15 84.7 133 41.4
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.1e-14 84.0 140 37.1
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.1e-14 84.0 148 35.1
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 1.1e-14 84.0 138 42.0
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.5e-14 83.6 131 38.9
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.2e-14 82.4 146 37.0
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 3.2e-14 82.4 130 40.8
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 3.2e-14 82.4 151 36.4
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 3.2e-14 82.4 118 45.8
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 4.2e-14 82.0 120 43.3
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 4.2e-14 82.0 129 41.1
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 7.2e-14 81.3 143 37.1
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 9.4e-14 80.9 135 37.8
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 2.1e-13 79.7 146 40.4
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 2.1e-13 79.7 127 40.9
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 2.1e-13 79.7 145 38.6
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 3.6e-13 79.0 135 40.7
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 6.1e-13 78.2 130 39.2
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 8.0e-13 77.8 149 34.9
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.4e-12 77.0 141 36.9
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 2.3e-12 76.3 146 34.9
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 2.3e-12 76.3 130 40.0
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 2.3e-12 76.3 149 36.2
Solyc02g069910.2 Solanum lycopersicum HOM05D005932 ORTHO05D006213 3.0e-12 75.9 101 51.5
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 3.0e-12 75.9 126 42.9
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 5.2e-12 75.1 131 38.2
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 6.7e-12 74.7 146 34.2
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 8.8e-12 74.3 134 37.3
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.2e-11 73.9 137 35.0
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 1.5e-11 73.6 137 39.4
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 9.7e-11 70.9 142 35.9
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 9.7e-11 70.9 132 34.8
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 1.3e-10 70.5 146 32.9
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.7e-10 70.1 132 37.9
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 2.2e-10 69.7 123 43.1
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 2.8e-10 69.3 131 38.2
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 2.8e-10 69.3 141 34.0
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 2.8e-10 69.3 149 35.6
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 3.7e-10 68.9 114 40.4
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 3.7e-10 68.9 144 36.8
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 1.4e-09 67.0 138 35.5
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.8e-09 66.6 128 34.4
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 1.8e-09 66.6 130 37.7
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 1.8e-09 66.6 130 37.7
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 1.8e-09 66.6 130 37.7
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.8e-09 66.6 138 35.5
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 2.4e-09 66.2 131 32.8
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 3.1e-09 65.9 137 35.8
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 3.1e-09 65.9 144 29.2
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 5.3e-09 65.1 134 36.6
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 5.3e-09 65.1 129 36.4
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 5.3e-09 65.1 137 35.8
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 5.3e-09 65.1 117 40.2
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 7.0e-09 64.7 134 34.3
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 9.1e-09 64.3 131 35.1
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 9.1e-09 64.3 128 39.1
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 9.1e-09 64.3 149 36.9
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.6e-08 63.5 146 32.2
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 4.5e-08 62.0 133 33.8
EL10Ac9g21553 Beta vulgaris HOM05D026734 ORTHO05D006213 5.9e-08 61.6 110 40.0
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 5.9e-08 61.6 128 36.7
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 5.9e-08 61.6 108 37.0
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 7.7e-08 61.2 136 33.1
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 7.7e-08 61.2 132 34.1
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 1.3e-07 60.5 141 30.5
FAN25G3656 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.7e-07 60.1 115 37.4
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 1.7e-07 60.1 122 32.0
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 2.2e-07 59.7 130 30.0
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 2.2e-07 59.7 117 35.9
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.2e-07 59.7 125 35.2
Aa31LG6G3710 Aethionema arabicum HOM05D005932 ORTHO05D006213 2.9e-07 59.3 131 35.9
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 2.9e-07 59.3 144 30.6
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 2.9e-07 59.3 123 31.7
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 5.0e-07 58.5 125 33.6
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 1.1e-06 57.4 112 36.6
MBI02_g25781_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.5e-06 57.0 128 35.9
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.9e-06 56.6 148 33.8
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 2.5e-06 56.2 106 38.7
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 5.5e-06 55.1 132 31.8
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 7.2e-06 54.7 147 31.3


User provided reference genes

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