Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 7.1e-159 563.9 294 100.0
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 2.4e-154 548.9 295 98.0
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 2.5e-135 485.7 294 85.4
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 2.0e-132 476.1 294 86.1
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 1.7e-131 473.0 294 85.4
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.5e-116 423.3 233 92.3
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.5e-116 423.3 233 92.3
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 2.2e-107 392.9 286 72.0
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 1.2e-102 377.1 289 68.9
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 8.0e-102 374.4 287 69.0
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 8.0e-102 374.4 290 67.6
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 1.0e-101 374.0 290 68.6
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 1.4e-101 373.6 289 67.5
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 2.9e-99 365.9 290 66.6
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 4.9e-99 365.2 292 66.1
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 2.4e-98 362.8 301 63.1
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 3.2e-98 362.5 272 69.1
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 4.1e-98 362.1 274 69.7
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 5.4e-98 361.7 269 68.4
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 1.2e-97 360.5 290 66.9
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 7.8e-97 357.8 290 66.6
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 1.0e-96 357.5 292 65.4
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 2.3e-96 356.3 290 65.9
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 2.3e-96 356.3 290 65.9
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 3.9e-96 355.5 289 63.0
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 8.6e-96 354.4 285 66.3
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 1.9e-95 353.2 267 68.2
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 3.3e-95 352.4 278 66.5
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 4.3e-95 352.1 296 62.8
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 4.3e-95 352.1 290 63.4
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 5.6e-95 351.7 290 64.8
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 7.3e-95 351.3 251 71.7
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 7.3e-95 351.3 231 75.8
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 9.5e-95 350.9 300 62.0
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 9.5e-95 350.9 296 63.9
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 2.1e-94 349.7 227 76.7
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 2.8e-94 349.4 243 72.4
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 3.6e-94 349.0 295 62.4
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 6.2e-94 348.2 278 65.8
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 1.0e-93 347.4 290 63.4
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 1.0e-93 347.4 273 66.3
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 1.8e-93 346.7 268 66.0
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 1.8e-93 346.7 290 62.1
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.0e-93 345.5 271 64.9
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 4.0e-93 345.5 299 62.9
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 8.9e-93 344.4 286 65.7
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 1.2e-92 344.0 286 65.7
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.6e-92 342.8 271 64.6
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 7.5e-92 341.3 270 65.2
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 9.8e-92 340.9 271 64.2
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 1.3e-91 340.5 234 72.2
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 1.3e-91 340.5 289 63.0
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 1.3e-91 340.5 289 63.3
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 2.2e-91 339.7 294 60.5
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 2.2e-91 339.7 294 60.5
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 2.2e-91 339.7 294 60.5
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 4.9e-91 338.6 218 78.0
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 8.3e-91 337.8 292 62.3
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 2.4e-90 336.3 292 61.3
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 3.2e-90 335.9 270 64.4
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 5.4e-90 335.1 278 62.6
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 5.4e-90 335.1 278 62.6
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 9.2e-90 334.3 292 61.3
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 2.7e-89 332.8 288 62.2
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 3.5e-89 332.4 296 62.8
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.6e-89 332.0 279 62.0
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 1.0e-88 330.9 288 61.5
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 1.7e-88 330.1 235 71.1
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 3.9e-88 328.9 278 61.2
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 6.6e-88 328.2 276 62.0
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 1.9e-87 326.6 276 62.0
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.5e-87 326.2 305 57.4
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 2.5e-87 326.2 274 62.0
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 3.3e-87 325.9 341 54.5
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 7.3e-87 324.7 273 61.5
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 9.5e-87 324.3 288 60.1
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 1.6e-86 323.6 294 60.2
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 1.6e-86 323.6 273 61.2
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 2.1e-86 323.2 273 61.2
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 2.8e-86 322.8 297 58.9
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 2.8e-86 322.8 233 68.7
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 3.6e-86 322.4 294 59.2
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 4.7e-86 322.0 293 59.0
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 6.2e-86 321.6 277 61.4
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 8.1e-86 321.2 233 68.2
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 5.2e-85 318.5 288 60.1
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 6.8e-85 318.2 300 57.0
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 8.9e-85 317.8 295 58.6
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 2.0e-84 316.6 280 60.7
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 4.9e-83 312.0 233 66.5
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 5.4e-82 308.5 235 66.8
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 9.2e-82 307.8 227 67.4
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 1.6e-81 307.0 220 68.2
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 1.7e-80 303.5 227 66.1
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 2.3e-80 303.1 298 55.4
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 1.9e-79 300.1 280 57.5
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 4.7e-78 295.4 260 61.2
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 6.4e-75 285.0 273 57.9
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 4.4e-68 262.3 192 67.7
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 2.1e-65 253.4 244 54.1
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 1.3e-64 250.8 295 51.9
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 3.1e-61 239.6 244 55.7
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 5.4e-58 228.8 168 68.5
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 6.4e-51 205.3 194 52.1
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 6.4e-51 205.3 135 81.5
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 6.7e-48 195.3 196 50.0
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 2.5e-47 193.4 203 53.7
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 3.3e-47 193.0 168 57.7
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 2.8e-46 189.9 139 65.5
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 1.4e-45 187.6 218 43.6
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 1.7e-43 180.6 159 57.2
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 2.1e-41 173.7 221 42.5
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 2.1e-38 163.7 133 59.4
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 1.0e-35 154.8 91 86.8
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 1.9e-34 150.6 194 42.8
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 2.5e-34 150.2 87 78.2
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 5.5e-26 122.5 91 68.1
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 7.4e-23 112.1 85 67.1
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 1.4e-18 97.8 101 49.5
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 1.9e-18 97.4 60 76.7
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 8.8e-16 88.6 221 28.5
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 1.0e-11 75.1 51 64.7
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 1.2e-09 68.2 75 53.3
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 6.7e-08 62.4 34 85.3
PRCOL_00006041 Prasinoderma coloniale HOM05D006484 ORTHO05D008002 1.5e-07 61.2 150 30.7


User provided reference genes

Program Settings