Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 7.2e-62 240.4 117 100.0
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 2.6e-51 205.3 108 91.7
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 2.0e-48 195.7 112 83.9
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 2.5e-46 188.7 110 81.8
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 5.5e-46 187.6 105 83.8
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 1.2e-45 186.4 110 80.0
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 2.3e-44 182.2 114 74.6
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 5.2e-44 181.0 112 72.3
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 6.8e-44 180.6 108 76.9
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 2.0e-43 179.1 107 75.7
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 2.0e-43 179.1 113 74.3
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 2.0e-43 179.1 105 80.0
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 2.6e-43 178.7 118 71.2
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 2.6e-43 178.7 112 73.2
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 3.4e-43 178.3 109 74.3
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 5.7e-43 177.6 113 73.5
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 7.5e-43 177.2 108 75.0
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 7.5e-43 177.2 108 75.9
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 7.5e-43 177.2 115 71.3
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 1.3e-42 176.4 108 74.1
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 3.7e-42 174.9 104 76.9
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 3.7e-42 174.9 108 75.0
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 3.7e-42 174.9 137 65.7
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 3.7e-42 174.9 112 71.4
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 4.8e-42 174.5 112 67.9
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 6.3e-42 174.1 109 74.3
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 6.3e-42 174.1 108 72.2
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 1.4e-41 172.9 109 71.6
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.4e-41 172.9 105 72.4
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 1.4e-41 172.9 112 69.6
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 1.4e-41 172.9 114 70.2
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 1.8e-41 172.6 108 69.4
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 2.4e-41 172.2 107 72.9
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.1e-41 171.8 112 70.5
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 3.1e-41 171.8 108 72.2
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 3.1e-41 171.8 112 69.6
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 5.4e-41 171.0 115 67.0
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 5.4e-41 171.0 115 67.0
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 5.4e-41 171.0 105 73.3
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 5.4e-41 171.0 108 72.2
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 5.4e-41 171.0 109 72.5
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 7.0e-41 170.6 112 70.5
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 7.0e-41 170.6 108 71.3
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 7.0e-41 170.6 108 71.3
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 9.1e-41 170.2 107 72.0
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 9.1e-41 170.2 112 69.6
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 9.1e-41 170.2 112 68.8
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 9.1e-41 170.2 107 72.9
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 1.2e-40 169.9 108 72.2
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.2e-40 169.9 112 69.6
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.6e-40 169.5 112 69.6
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 1.6e-40 169.5 107 72.9
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 2.0e-40 169.1 112 66.1
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 2.0e-40 169.1 112 67.9
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 2.0e-40 169.1 109 69.7
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 2.0e-40 169.1 107 72.9
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 2.0e-40 169.1 111 68.5
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 2.0e-40 169.1 124 66.9
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 2.0e-40 169.1 108 70.4
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 2.7e-40 168.7 109 69.7
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 2.7e-40 168.7 109 69.7
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 3.5e-40 168.3 108 70.4
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 4.5e-40 167.9 109 69.7
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 4.5e-40 167.9 105 71.4
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 5.9e-40 167.5 111 69.4
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 7.7e-40 167.2 112 70.5
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 7.7e-40 167.2 107 69.2
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 7.7e-40 167.2 112 69.6
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.0e-39 166.8 112 69.6
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 1.0e-39 166.8 107 71.0
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 1.3e-39 166.4 114 66.7
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 1.3e-39 166.4 112 67.0
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 1.3e-39 166.4 112 67.0
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 1.3e-39 166.4 109 66.1
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 2.3e-39 165.6 112 68.8
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 3.8e-39 164.9 107 72.0
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 3.8e-39 164.9 106 70.8
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 5.0e-39 164.5 108 70.4
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 5.0e-39 164.5 112 67.9
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 8.6e-39 163.7 108 68.5
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 8.6e-39 163.7 116 67.2
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 8.6e-39 163.7 108 69.4
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 8.6e-39 163.7 110 66.4
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 8.6e-39 163.7 116 62.1
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 1.5e-38 162.9 116 67.2
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 1.5e-38 162.9 116 66.4
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 1.9e-38 162.5 108 68.5
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 1.9e-38 162.5 98 73.5
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 3.3e-38 161.8 107 70.1
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 3.3e-38 161.8 116 61.2
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 4.2e-38 161.4 112 66.1
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 4.2e-38 161.4 96 75.0
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 5.5e-38 161.0 112 67.0
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 5.5e-38 161.0 108 68.5
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 7.2e-38 160.6 108 63.9
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 7.2e-38 160.6 108 63.9
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 7.2e-38 160.6 108 63.9
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 9.5e-38 160.2 114 64.0
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 9.5e-38 160.2 108 68.5
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 9.5e-38 160.2 110 67.3
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 1.6e-37 159.5 108 63.9
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 1.6e-37 159.5 110 64.5
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 2.8e-37 158.7 112 65.2
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 4.7e-37 157.9 107 67.3
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 4.7e-37 157.9 108 63.9
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 6.1e-37 157.5 158 53.2
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 6.1e-37 157.5 116 65.5
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 8.0e-37 157.1 108 63.0
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 8.0e-37 157.1 110 63.6
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 1.0e-36 156.8 105 70.5
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 1.8e-36 156.0 108 63.9
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 2.3e-36 155.6 108 64.8
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 5.2e-36 154.5 108 64.8
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 2.0e-35 152.5 105 62.9
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 4.9e-34 147.9 107 62.6
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 2.4e-33 145.6 107 62.6
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 1.3e-31 139.8 110 56.4
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 9.5e-30 133.7 106 57.5
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 9.5e-30 133.7 106 57.5
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 2.8e-29 132.1 110 53.6
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 4.0e-28 128.3 107 57.9
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 2.0e-27 125.9 106 50.9
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 5.4e-25 117.9 88 59.1
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 4.6e-24 114.8 82 68.3
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 8.6e-23 110.5 54 96.3
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 1.1e-22 110.2 106 47.2
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 9.5e-22 107.1 63 76.2
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 9.5e-22 107.1 63 76.2
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 2.8e-21 105.5 106 46.2
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 8.9e-20 100.5 63 73.0
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 3.4e-19 98.6 112 50.9
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 3.2e-17 92.0 58 70.7
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 6.0e-16 87.8 94 44.7
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 1.7e-15 86.3 50 74.0
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 3.0e-15 85.5 50 76.0
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 8.6e-15 84.0 58 60.3
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 3.3e-14 82.0 58 65.5
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.2e-13 80.1 57 64.9
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 2.1e-13 79.3 46 71.7
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 2.1e-13 79.3 125 36.8
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 2.0e-11 72.8 57 57.9
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 4.1e-09 65.1 44 63.6


User provided reference genes

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