Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 5.7e-192 674.1 343 100.0
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 6.0e-117 424.9 286 82.5
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 8.7e-116 421.0 285 80.0
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 1.5e-115 420.2 289 79.2
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 3.7e-114 415.6 285 79.3
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 2.8e-106 389.4 285 74.0
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 1.4e-105 387.1 241 83.0
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 2.1e-101 373.2 286 71.3
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 7.9e-101 371.3 292 69.9
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 3.0e-100 369.4 291 69.4
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 2.2e-98 363.2 286 68.5
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 3.7e-98 362.5 285 68.1
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 4.8e-98 362.1 289 67.1
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 8.2e-98 361.3 286 69.2
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 1.4e-97 360.5 296 66.6
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 9.1e-97 357.8 286 66.4
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 3.4e-96 355.9 321 64.8
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 5.9e-96 355.1 286 67.1
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 7.7e-96 354.8 285 65.6
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 1.3e-95 354.0 295 66.1
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 8.5e-95 351.3 252 71.0
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 8.5e-95 351.3 251 72.9
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 1.1e-94 350.9 285 64.6
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 2.5e-94 349.7 286 66.1
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 5.5e-94 348.6 240 73.3
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 7.2e-94 348.2 286 65.7
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 7.2e-94 348.2 291 65.3
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 7.2e-94 348.2 291 65.3
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 1.0e-92 344.4 285 66.7
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 2.3e-92 343.2 288 66.7
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 8.8e-92 341.3 232 76.3
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 2.0e-91 340.1 285 66.0
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 2.0e-91 340.1 247 72.1
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 3.3e-91 339.3 286 66.1
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 5.7e-91 338.6 285 65.6
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 7.4e-91 338.2 248 69.8
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 9.7e-91 337.8 267 68.9
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 1.7e-90 337.0 285 64.9
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 1.7e-90 337.0 289 64.0
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 2.2e-90 336.7 287 61.3
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.8e-90 336.3 288 66.3
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.8e-90 336.3 288 66.7
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 4.8e-90 335.5 263 68.4
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 8.2e-90 334.7 257 67.7
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 1.1e-89 334.3 239 71.5
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.8e-89 333.6 289 63.7
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 1.8e-89 333.6 246 69.1
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 4.1e-89 332.4 288 65.3
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.1e-89 332.4 288 65.3
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 4.1e-89 332.4 291 62.2
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 4.1e-89 332.4 255 66.7
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 7.0e-89 331.6 250 68.8
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 1.2e-88 330.9 292 60.6
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.2e-88 330.9 293 63.5
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 1.3e-87 327.4 280 61.8
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 2.2e-87 326.6 286 63.6
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 6.5e-87 325.1 268 64.6
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 8.5e-87 324.7 288 62.8
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.1e-86 324.3 286 62.2
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 1.1e-86 324.3 232 73.3
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 1.4e-86 323.9 257 66.5
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 1.4e-86 323.9 256 63.7
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 5.5e-86 322.0 279 63.4
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 5.5e-86 322.0 289 64.4
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.6e-85 320.5 264 64.0
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 2.1e-85 320.1 265 65.7
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 2.7e-85 319.7 289 62.3
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 3.6e-85 319.3 263 64.6
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 1.0e-84 317.8 292 61.6
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 5.2e-84 315.5 285 64.2
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 6.7e-84 315.1 301 59.1
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 8.8e-84 314.7 254 64.6
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 2.0e-83 313.5 266 64.7
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 2.6e-83 313.2 239 68.6
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 3.3e-83 312.8 236 70.3
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 5.7e-83 312.0 247 64.8
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 7.4e-83 311.6 252 61.9
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 4.8e-82 308.9 312 57.7
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 1.4e-81 307.4 277 62.5
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 1.8e-81 307.0 277 62.5
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 7.0e-81 305.1 293 59.0
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.6e-80 303.9 292 60.6
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 2.0e-80 303.5 279 60.2
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 1.0e-79 301.2 240 66.7
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 8.5e-79 298.1 230 68.3
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 5.2e-76 288.9 288 58.3
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 7.0e-73 278.5 238 60.5
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 1.3e-71 274.2 267 56.2
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 2.9e-71 273.1 234 61.5
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 6.5e-71 271.9 239 61.1
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 1.5e-70 270.8 252 59.1
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 7.2e-70 268.5 266 56.0
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 6.1e-69 265.4 213 63.8
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 1.4e-65 254.2 186 71.0
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 2.4e-65 253.4 253 56.1
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 1.1e-57 228.0 184 65.8
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 2.9e-55 219.9 287 49.1
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 5.6e-54 215.7 228 52.2
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 2.0e-51 207.2 226 50.4
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 6.4e-50 202.2 288 47.2
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 8.0e-45 185.3 227 42.3
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 4.6e-40 169.5 111 76.6
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 5.8e-35 152.5 238 37.8
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 2.1e-32 144.1 226 36.3
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 2.0e-27 127.5 83 71.1
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 1.1e-25 121.7 242 33.5
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 6.6e-23 112.5 216 38.9
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 3.6e-21 106.7 122 46.7
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 2.7e-16 90.5 81 56.8
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 5.6e-14 82.8 74 52.7
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 8.4e-10 68.9 36 86.1
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.2e-09 67.0 46 67.4
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 5.4e-09 66.2 51 62.7
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 9.3e-09 65.5 75 53.3
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 9.3e-09 65.5 75 53.3
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 1.2e-08 65.1 75 53.3
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.6e-08 64.7 53 50.9
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 3.5e-08 63.5 112 40.2
Rhsim03G0260900 Rhododendron simsii HOM05D021265 ORTHO05D339689 3.3e-06 57.0 46 58.7


User provided reference genes

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