Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 0.0e+00 1608.6 821 100.0
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 0.0e+00 1528.1 823 95.3
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 0.0e+00 1411.0 823 88.2
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 0.0e+00 1402.1 823 87.5
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 0.0e+00 1395.6 823 87.2
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 0.0e+00 1381.7 822 86.6
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 3.2e-281 971.8 802 63.5
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 1.3e-279 966.5 825 62.4
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 9.6e-278 960.3 823 61.1
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 1.1e-276 956.8 830 60.5
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 1.1e-276 956.8 831 60.9
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 2.4e-276 955.7 828 60.0
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 4.0e-276 954.9 824 60.2
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 6.0e-272 941.0 828 60.0
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.3e-271 939.9 823 59.9
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.6e-269 932.9 825 61.3
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.2e-265 918.7 831 57.9
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 1.2e-264 916.8 830 59.2
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 3.9e-263 911.8 830 58.7
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 3.3e-262 908.7 829 58.3
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 4.0e-260 901.7 829 57.8
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 5.3e-260 901.4 823 57.8
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 6.9e-260 901.0 835 57.4
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 9.0e-260 900.6 827 59.0
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 2.0e-259 899.4 833 58.5
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 2.6e-259 899.0 830 58.3
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 3.4e-259 898.7 798 58.8
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 5.8e-259 897.9 796 58.8
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 1.7e-258 896.3 800 59.6
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.2e-258 896.0 798 58.6
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 2.9e-258 895.6 824 57.9
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 4.2e-257 891.7 811 58.4
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 7.9e-256 887.5 796 58.9
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 7.9e-256 887.5 796 59.2
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 2.3e-255 885.9 796 59.2
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 1.5e-254 883.2 829 56.1
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 3.3e-254 882.1 794 57.7
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 4.3e-254 881.7 828 56.0
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 1.6e-253 879.8 826 56.7
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 4.8e-253 878.2 834 56.2
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 1.4e-249 866.7 833 55.7
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 3.2e-249 865.5 819 55.9
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 1.3e-247 860.1 834 55.4
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 3.3e-246 855.5 814 55.9
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.6e-245 853.2 814 55.8
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 2.4e-244 849.4 833 54.7
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 3.2e-241 839.0 829 53.1
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 3.2e-241 839.0 812 54.9
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 7.1e-241 837.8 793 56.4
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 2.7e-240 835.9 831 53.8
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.4e-236 822.8 832 52.5
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 5.3e-236 821.6 832 52.6
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 2.6e-235 819.3 832 52.5
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 1.1e-233 813.9 837 52.2
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 7.2e-233 811.2 832 52.6
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 5.1e-231 805.1 835 51.9
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 5.1e-231 805.1 762 57.2
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 1.1e-230 803.9 796 53.6
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 9.7e-230 800.8 821 54.1
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 2.4e-228 796.2 843 51.2
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 3.1e-228 795.8 832 51.7
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 4.1e-228 795.4 748 56.1
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 2.0e-227 793.1 835 52.5
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 5.5e-225 785.0 833 52.3
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 8.8e-223 777.7 803 52.7
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 4.1e-220 768.8 797 54.1
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 1.2e-219 767.3 817 51.4
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 5.0e-218 761.9 835 52.3
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 4.2e-217 758.8 806 52.5
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 3.6e-216 755.7 837 51.5
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 7.4e-214 748.0 648 60.5
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.7e-210 736.9 740 53.1
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 6.5e-210 734.9 830 49.5
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 8.5e-210 734.6 740 53.1
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 2.5e-209 733.0 836 49.8
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 2.7e-208 729.6 837 47.9
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 6.1e-208 728.4 837 49.7
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 3.0e-207 726.1 808 48.9
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 2.6e-206 723.0 824 49.0
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 1.3e-205 720.7 807 49.2
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 2.2e-205 719.9 606 62.0
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 1.1e-204 717.6 802 48.8
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 1.6e-203 713.8 831 47.8
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 3.2e-201 706.1 836 47.2
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 2.1e-200 703.4 800 48.8
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 4.7e-200 702.2 831 48.0
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 8.0e-200 701.4 821 48.6
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 2.8e-197 693.0 806 48.6
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 4.5e-195 685.6 817 47.0
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 3.7e-189 666.0 837 47.0
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.7e-181 639.4 606 55.4
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 1.8e-175 620.5 799 44.3
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 7.1e-172 608.6 549 60.5
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 6.6e-170 602.1 745 48.3
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 9.2e-164 581.6 607 51.6
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 7.8e-163 578.6 801 42.6
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 6.0e-155 552.4 489 58.5
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 4.9e-149 532.7 579 49.4
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 8.1e-144 515.4 424 63.7
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.3e-133 481.5 795 38.7
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 6.5e-125 452.6 806 40.7
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 5.3e-119 433.0 522 47.3
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.1e-111 408.7 354 60.2
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 4.4e-97 360.1 290 64.1
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 4.5e-94 350.1 275 64.7
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 2.9e-93 347.4 492 45.5
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 4.4e-89 333.6 907 29.0
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.4e-82 312.0 316 55.4
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 2.2e-80 304.7 881 28.0
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 2.7e-78 297.7 225 68.9
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.9e-64 251.1 191 66.0
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 4.1e-63 247.3 815 27.6
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 3.5e-54 217.6 361 34.3
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.3e-53 215.7 247 48.6
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 1.2e-51 209.1 540 27.6
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.4e-50 205.7 587 30.5
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.4e-47 195.7 225 49.8
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 4.5e-25 120.9 214 42.1
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 8.7e-21 106.7 71 70.4


User provided reference genes

Program Settings