Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 5.3e-99 364.4 189 100.0
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 3.8e-89 331.6 186 94.6
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 2.3e-78 295.8 174 86.8
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 4.1e-75 285.0 176 81.2
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 2.7e-74 282.3 175 80.0
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 4.5e-74 281.6 176 79.0
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 5.9e-74 281.2 174 78.2
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 2.3e-73 279.3 174 80.5
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 7.3e-72 274.2 185 73.5
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 9.5e-72 273.9 177 75.7
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 2.1e-71 272.7 177 76.8
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 1.8e-70 269.6 173 76.3
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 2.3e-70 269.2 175 77.7
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 2.3e-70 269.2 174 78.2
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 4.0e-70 268.5 174 76.4
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 5.2e-70 268.1 173 75.7
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 8.9e-70 267.3 178 74.7
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 2.0e-69 266.2 191 71.7
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 2.0e-69 266.2 177 74.0
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 2.6e-69 265.8 180 72.2
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 4.4e-69 265.0 179 73.7
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 1.3e-68 263.5 173 76.3
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 2.2e-68 262.7 140 95.7
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 2.9e-68 262.3 176 73.9
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 3.7e-68 261.9 188 69.1
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 6.4e-68 261.2 179 71.5
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 8.3e-68 260.8 179 70.4
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 2.4e-67 259.2 177 71.8
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 3.2e-67 258.8 171 73.1
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 4.1e-67 258.5 170 75.9
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 7.0e-67 257.7 174 73.0
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 7.0e-67 257.7 169 75.1
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 1.2e-66 256.9 174 71.3
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 4.6e-66 255.0 177 70.1
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 7.8e-66 254.2 177 68.4
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 2.3e-65 252.7 186 67.7
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 3.0e-65 252.3 175 68.0
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 3.9e-65 251.9 177 68.4
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 3.9e-65 251.9 180 69.4
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 8.6e-65 250.8 189 66.7
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 8.6e-65 250.8 178 69.1
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 1.5e-64 250.0 179 69.8
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 2.5e-64 249.2 170 72.9
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 3.3e-64 248.8 181 68.5
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 3.3e-64 248.8 175 70.9
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 4.3e-64 248.4 179 69.3
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 4.3e-64 248.4 175 67.4
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 2.8e-63 245.7 172 71.5
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 4.7e-63 245.0 175 68.6
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 6.2e-63 244.6 181 68.0
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 6.2e-63 244.6 175 69.1
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 1.1e-62 243.8 167 71.3
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 1.1e-62 243.8 174 69.5
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 1.4e-62 243.4 181 66.9
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 1.8e-62 243.0 179 68.2
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 2.3e-62 242.7 173 67.1
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 6.8e-62 241.1 175 70.3
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 1.2e-61 240.4 181 66.3
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 2.0e-61 239.6 174 69.5
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 2.6e-61 239.2 165 72.1
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 2.6e-61 239.2 172 65.7
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 7.5e-61 237.7 169 69.8
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 1.3e-60 236.9 166 71.7
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 2.9e-60 235.7 180 66.7
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 2.9e-60 235.7 182 65.9
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 2.9e-60 235.7 180 66.7
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 6.4e-60 234.6 179 65.9
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 8.3e-60 234.2 165 72.7
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 8.3e-60 234.2 180 63.3
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 1.1e-59 233.8 180 66.1
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 5.4e-59 231.5 174 67.2
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 9.2e-59 230.7 177 62.7
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 7.8e-58 227.6 205 59.0
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 1.0e-57 227.3 173 62.4
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 1.7e-57 226.5 167 68.3
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 2.5e-56 222.6 162 67.3
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 2.5e-56 222.6 187 59.9
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 1.6e-55 219.9 254 51.2
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 2.1e-55 219.5 166 66.9
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 2.1e-55 219.5 151 72.2
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 2.8e-55 219.2 147 72.8
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 3.6e-55 218.8 152 70.4
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 8.1e-55 217.6 175 60.0
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 8.1e-55 217.6 149 73.8
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 8.9e-54 214.2 167 64.7
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 2.2e-52 209.5 168 63.7
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 4.9e-52 208.4 135 75.6
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 4.1e-51 205.3 140 70.7
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 4.6e-50 201.8 174 58.6
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 2.3e-49 199.5 177 59.3
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 2.5e-48 196.1 168 55.4
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 5.6e-48 194.9 117 82.1
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 9.5e-48 194.1 118 78.8
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 1.1e-46 190.7 195 52.3
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 5.8e-45 184.9 138 66.7
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 1.7e-44 183.3 150 64.7
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 5.1e-41 171.8 191 45.5
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 6.6e-41 171.4 182 44.5
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 8.7e-41 171.0 179 44.7
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 5.3e-38 161.8 138 63.0
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 5.3e-38 161.8 123 65.0
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 1.3e-36 157.1 137 56.2
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 4.5e-29 132.1 156 41.0
DCAR_021795 Daucus carota HOM05D001420 ORTHO05D009292 1.9e-27 126.7 88 67.0
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 2.4e-27 126.3 116 52.6
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 2.3e-17 93.2 57 82.5
FAN02G0503 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.4e-14 84.0 70 58.6
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 5.3e-14 82.0 43 90.7
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 4.9e-12 75.5 143 30.8
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 1.1e-11 74.3 48 81.2
Medtr1g051110 Medicago truncatula HOM05D001420 ORTHO05D009292 1.9e-08 63.5 72 50.0
Actinidia30872 Actinidia chinensis HOM05D005765 ORTHO05D002313 3.3e-08 62.8 97 43.3
DCAR_021794 Daucus carota HOM05D001420 ORTHO05D009292 5.3e-06 55.5 38 71.1


User provided reference genes

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