Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 5.0e-51 204.1 103 100.0
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 5.0e-51 204.1 103 100.0
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 3.6e-49 198.0 103 95.1
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 6.4e-46 187.2 103 90.3
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 3.2e-45 184.9 101 90.1
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.5e-42 176.0 101 84.2
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 2.1e-41 172.2 101 80.2
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 1.4e-40 169.5 103 80.6
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 1.4e-40 169.5 103 79.6
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.5e-39 166.0 101 80.2
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 2.0e-39 165.6 104 79.8
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 7.0e-37 157.1 103 77.7
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.2e-36 156.4 100 76.0
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 4.6e-36 154.5 97 78.4
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 6.0e-36 154.1 100 76.0
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 7.8e-36 153.7 101 76.2
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 7.8e-36 153.7 101 76.2
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 7.8e-36 153.7 101 76.2
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 7.8e-36 153.7 100 77.0
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 1.0e-35 153.3 97 78.4
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 1.3e-35 152.9 100 79.0
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 2.3e-35 152.1 92 82.6
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 3.0e-35 151.8 99 75.8
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 3.0e-35 151.8 100 75.0
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 3.9e-35 151.4 100 76.0
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 3.9e-35 151.4 100 76.0
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 3.9e-35 151.4 100 76.0
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 5.1e-35 151.0 100 76.0
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 6.6e-35 150.6 100 74.0
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 6.6e-35 150.6 96 77.1
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 8.6e-35 150.2 100 75.0
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 8.6e-35 150.2 99 74.7
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 1.9e-34 149.1 99 74.7
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.9e-34 149.1 99 75.8
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 1.9e-34 149.1 92 79.3
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 1.9e-34 149.1 92 79.3
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 2.5e-34 148.7 103 75.7
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 2.5e-34 148.7 102 76.5
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 3.3e-34 148.3 93 77.4
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 4.3e-34 147.9 99 75.8
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 5.6e-34 147.5 92 79.3
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 5.6e-34 147.5 93 78.5
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 7.3e-34 147.1 92 77.2
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 7.3e-34 147.1 103 73.8
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 1.2e-33 146.4 103 68.9
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.6e-33 146.0 89 79.8
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 2.1e-33 145.6 101 72.3
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.1e-33 145.6 102 73.5
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.1e-33 145.6 102 73.5
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 2.1e-33 145.6 102 73.5
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 2.8e-33 145.2 92 77.2
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 2.8e-33 145.2 103 73.8
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 2.8e-33 145.2 96 71.9
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 2.8e-33 145.2 103 69.9
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 3.6e-33 144.8 101 71.3
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 4.7e-33 144.4 103 69.9
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 4.7e-33 144.4 103 69.9
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.1e-32 143.3 92 78.3
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.1e-32 143.3 103 68.9
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 1.1e-32 143.3 100 72.0
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.1e-32 143.3 88 75.0
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 1.4e-32 142.9 92 77.2
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 1.4e-32 142.9 92 73.9
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.4e-32 142.9 100 74.0
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 1.8e-32 142.5 103 69.9
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.8e-32 142.5 92 77.2
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 2.3e-32 142.1 101 70.3
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 3.1e-32 141.7 102 72.5
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 3.1e-32 141.7 92 76.1
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 8.9e-32 140.2 92 75.0
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 8.9e-32 140.2 92 75.0
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 1.2e-31 139.8 92 73.9
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.2e-31 139.8 100 70.0
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.2e-31 139.8 103 70.9
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.2e-31 139.8 88 77.3
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 1.5e-31 139.4 92 75.0
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.5e-31 139.4 92 73.9
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.5e-31 139.4 92 73.9
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 2.0e-31 139.0 103 68.0
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.0e-31 139.0 91 72.5
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 7.5e-31 137.1 96 71.9
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 9.9e-31 136.7 102 68.6
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 1.3e-30 136.3 92 75.0
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 1.3e-30 136.3 82 80.5
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 2.2e-30 135.6 92 71.7
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.2e-30 135.6 89 71.9
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 4.9e-30 134.4 101 70.3
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 6.4e-30 134.0 90 72.2
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 4.1e-29 131.3 78 82.1
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 7.8e-28 127.1 80 76.2
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 3.0e-27 125.2 132 53.8
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.5e-26 122.9 80 76.2
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.5e-26 122.1 91 62.6
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 9.5e-26 120.2 81 72.8
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.4e-24 116.3 146 49.3
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 3.1e-24 115.2 80 71.2
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 5.2e-24 114.4 80 70.0
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.5e-23 112.8 79 70.9
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 1.5e-23 112.8 87 62.1
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 2.0e-23 112.5 100 61.0
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 4.9e-22 107.8 87 59.8
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.2e-20 103.2 82 67.1
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 3.5e-20 101.7 74 64.9
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.8e-20 100.5 77 68.8
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.3e-19 99.0 95 50.5
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 6.6e-19 97.4 81 61.7
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 7.3e-18 94.0 91 47.3
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 7.3e-18 94.0 70 67.1
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 9.6e-18 93.6 57 78.9
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 5.3e-16 87.8 58 74.1
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 1.5e-15 86.3 84 54.8
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.4e-13 79.7 57 73.7
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.9e-10 69.3 48 70.8
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 3.6e-09 65.1 46 69.6
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 6.2e-09 64.3 45 68.9
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 5.3e-08 61.2 45 64.4


User provided reference genes

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