Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 0.0e+00 1241.1 616 100.0
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 0.0e+00 1226.5 615 98.4
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 0.0e+00 1131.3 615 90.1
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 0.0e+00 1118.6 615 89.3
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 0.0e+00 1087.0 615 87.5
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 0.0e+00 1080.5 615 87.6
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 6.5e-279 963.8 635 73.5
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 6.5e-271 937.2 650 69.7
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 3.2e-270 934.9 614 72.0
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 5.5e-270 934.1 616 72.4
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 9.4e-270 933.3 615 72.2
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 1.6e-269 932.6 615 73.3
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 1.6e-269 932.6 615 73.3
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 6.3e-266 920.6 639 70.7
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 4.1e-265 917.9 615 70.7
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 4.1e-265 917.9 615 70.4
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 2.1e-261 905.6 616 70.5
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 4.0e-260 901.4 615 71.5
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 2.0e-259 899.0 615 69.6
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 7.5e-259 897.1 615 69.3
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 1.4e-257 892.9 615 68.8
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 3.1e-257 891.7 615 70.6
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 3.1e-257 891.7 613 70.1
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 7.0e-257 890.6 615 69.1
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 1.0e-255 886.7 625 67.7
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 1.7e-255 885.9 615 69.8
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 2.5e-254 882.1 615 68.8
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 3.6e-253 878.2 628 67.8
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 1.4e-252 876.3 615 69.9
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 4.0e-252 874.8 615 66.5
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 1.5e-251 872.8 615 67.8
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 3.4e-251 871.7 615 68.3
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 3.7e-250 868.2 597 69.5
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 3.5e-248 861.7 615 67.5
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 1.7e-247 859.4 615 66.5
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 5.0e-247 857.8 615 66.5
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 5.0e-247 857.8 615 66.5
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.5e-247 857.4 615 66.3
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.5e-246 856.3 615 66.3
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 3.2e-246 855.1 615 68.3
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 5.5e-246 854.4 615 66.5
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 7.2e-246 854.0 615 65.5
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 1.6e-245 852.8 615 65.4
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.1e-245 852.4 615 68.1
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.1e-245 850.9 610 66.2
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 1.0e-244 850.1 615 67.2
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 4.0e-244 848.2 615 65.7
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 8.3e-242 840.5 615 66.8
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 2.4e-241 839.0 615 65.5
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 3.1e-241 838.6 615 65.5
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 4.5e-240 834.7 626 65.8
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 1.3e-239 833.2 616 65.6
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 5.0e-239 831.2 615 65.4
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 9.5e-238 827.0 572 68.5
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 2.1e-237 825.9 615 65.5
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 4.7e-237 824.7 615 64.9
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 1.4e-236 823.2 620 64.4
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 3.0e-236 822.0 565 70.1
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 3.0e-236 822.0 615 65.7
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 4.0e-236 821.6 615 64.7
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 2.6e-235 818.9 615 65.5
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 5.7e-235 817.8 615 63.9
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 6.4e-234 814.3 615 63.7
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 1.1e-233 813.5 616 63.8
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 2.0e-232 809.3 615 63.9
SalBow1G1849 Salvia bowleyana HOM05D005191 ORTHO05D006725 1.0e-231 807.0 623 62.8
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 1.6e-229 799.7 620 63.9
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 6.2e-229 797.7 615 62.8
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 9.2e-225 783.9 570 67.0
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 2.3e-223 779.2 727 55.2
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 4.0e-220 768.5 488 75.8
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 4.1e-217 758.4 615 61.5
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 3.9e-215 751.9 632 60.1
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 6.6e-215 751.1 615 61.5
Oeu052176.1 Olea europaea HOM05D005191 ORTHO05D006725 6.8e-212 741.1 473 74.8
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 8.4e-210 734.2 621 60.7
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 3.2e-209 732.3 615 60.3
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 5.6e-206 721.5 618 58.7
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 8.1e-205 717.6 616 58.3
GSVIVG01015604001 Vitis vinifera HOM05D005191 ORTHO05D006725 2.6e-203 712.6 473 71.0
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 9.9e-203 710.7 616 57.5
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 6.4e-202 708.0 618 58.3
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 6.4e-202 708.0 618 58.3
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 1.4e-201 706.8 616 57.6
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 1.6e-200 703.4 618 57.9
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 1.6e-200 703.4 616 57.1
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 1.6e-200 703.4 620 57.6
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 1.3e-199 700.3 622 57.2
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 5.1e-199 698.4 610 57.7
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 1.0e-191 674.1 441 73.5
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 2.8e-189 666.0 520 61.9
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 1.5e-187 660.2 636 54.4
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 1.9e-185 653.3 600 56.8
Hund26401 Selenicereus undatus HOM05D005191 ORTHO05D006725 2.3e-159 566.6 481 59.0
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 1.7e-157 560.5 626 48.2
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 3.2e-153 546.2 382 70.7
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 2.9e-138 496.5 646 42.9
Haze_25491 Corylus avellana HOM05D005191 ORTHO05D006725 2.1e-136 490.3 381 62.2
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 5.7e-134 482.3 363 62.3
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 1.3e-133 481.1 643 41.7
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 4.2e-129 466.1 633 41.1
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 2.8e-128 463.4 360 62.2
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 4.0e-127 459.5 357 63.6
Ca_06948_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 2.4e-116 423.7 327 62.4
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 9.8e-110 401.7 328 62.2
Sabra06G0047500 Salix brachista HOM05D005191 ORTHO05D006725 6.4e-109 399.1 308 62.0
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 3.0e-106 390.2 339 58.4
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 4.3e-105 386.3 318 57.9
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 2.1e-104 384.0 640 38.0
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 4.0e-103 379.8 295 63.4
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 1.9e-100 370.9 536 40.7
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 2.4e-100 370.5 662 35.2
vmacro06156 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 2.5e-81 307.4 245 61.6
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 2.0e-78 297.7 240 62.1
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 1.8e-74 284.6 225 62.2
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 4.1e-55 220.3 136 78.7
unitig_0.g2716 Utricularia gibba HOM05D005191 ORTHO05D006725 2.4e-47 194.5 150 64.0
FAN06G0842 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.2e-46 192.2 315 39.0
CDE05G1976 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 9.7e-41 172.6 159 55.3
Actinidia38722 Actinidia chinensis HOM05D005191 ORTHO05D006725 8.2e-40 169.5 161 52.8
RcHm_v2.0_Chr5g0051701 Rosa chinensis HOM05D005191 ORTHO05D006725 7.7e-30 136.3 140 49.3
FAN06G5005 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.9e-29 134.4 268 37.3
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 1.0e-26 125.9 99 61.6
FvH4_7g23890 Fragaria vesca HOM05D005191 ORTHO05D006725 4.4e-25 120.6 144 45.8
FAN10G4062 Fragaria x ananassa HOM05D005191 ORTHO05D006725 7.5e-25 119.8 123 54.5
Rhsim13G0106800 Rhododendron simsii HOM05D005191 ORTHO05D006725 8.2e-24 116.3 98 62.2
FAN10G2766 Fragaria x ananassa HOM05D005191 ORTHO05D006725 9.4e-20 102.8 84 61.9
MBI13_g29624_MAGBIO Magnolia biondii HOM05D005191 ORTHO05D006725 1.0e-18 99.4 63 68.3
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 1.4e-18 99.0 130 43.8
FAN26G2291 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.3e-18 98.2 89 58.4
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 3.1e-15 87.8 723 20.7
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 4.5e-14 84.0 445 24.0
FvH4_1g29180 Fragaria vesca HOM05D005191 ORTHO05D025363 5.5e-12 77.0 63 61.9
arahy.Tifrunner.gnm1.ann1.GZYG19 Arachis hypogaea HOM05D000607 ORTHO05D000518 7.8e-06 56.6 27 92.6


User provided reference genes

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