Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005140g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009625 5.2e-215 750.7 372 100.0
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 7.0e-111 404.8 456 50.4
Nitab4.5_0000014g0460 Nicotiana tabacum HOM05D004909 ORTHO05D009625 1.1e-87 327.8 353 55.5
Solyc05g045720.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 2.4e-79 300.1 450 41.3
Solyc05g045890.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 2.3e-29 134.0 151 48.3
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 2.7e-22 110.5 288 31.2
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 4.8e-19 99.8 476 25.0
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 2.0e-17 94.4 239 30.1
RcHm_v2.0_Chr6g0256711 Rosa chinensis HOM05D004909 ORTHO05D009625 1.7e-16 91.3 105 46.7
Sopen05g027060 Solanum pennellii HOM05D000213 ORTHO05D011567 2.5e-15 87.4 75 58.7
Sopen05g027030 Solanum pennellii HOM05D000213 ORTHO05D011567 7.2e-15 85.9 75 58.7
PGR004G1782 Punica granatum HOM05D004909 ORTHO05D009625 8.0e-14 82.4 106 48.1
PGR044G1103 Punica granatum HOM05D004909 ORTHO05D009625 8.0e-14 82.4 106 48.1
Sc14g0003260 Simmondsia chinensis HOM05D004909 ORTHO05D009625 3.3e-12 77.0 136 32.4
DCAR_032461 Daucus carota HOM05D004909 ORTHO05D009625 4.4e-12 76.6 290 24.1
SEGI_03043 Sequoiadendron giganteum HOM05D004909 ORTHO05D019368 4.4e-12 76.6 104 39.4
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 9.7e-12 75.5 137 32.1
CsaV3_UNG207890 Cucumis sativus L. HOM05D004909 ORTHO05D009625 2.2e-11 74.3 176 32.4
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 8.2e-11 72.4 135 34.1
Aqoxy2G02243 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 4.5e-09 66.6 152 31.6
Aqoxy3G01128 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 4.5e-09 66.6 152 31.6
Duzib116G0563 Durio zibethinus HOM05D004909 ORTHO05D009625 4.5e-09 66.6 88 43.2
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 5.9e-09 66.2 76 47.4
RcHm_v2.0_MTg0498751 Rosa chinensis HOM05D004909 ORTHO05D009625 1.0e-08 65.5 188 26.6
EL10Ac1g01430 Beta vulgaris HOM05D004909 ORTHO05D009625 5.0e-08 63.2 134 29.1
Cc00_g11440 Coffea canephora HOM05D004909 ORTHO05D009625 6.5e-08 62.8 40 62.5
PSO063G2824 Papaver somniferum HOM05D004909 ORTHO05D009625 1.5e-07 61.6 133 28.6
EL10Ac1g02202 Beta vulgaris HOM05D004909 ORTHO05D009625 1.9e-07 61.2 133 27.8
EL10Ac7g16727 Beta vulgaris HOM05D004909 ORTHO05D009625 5.5e-07 59.7 131 28.2
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 7.2e-07 59.3 76 43.4
VMungo1067G0003 Vigna mungo HOM05D004909 ORTHO05D009625 1.2e-06 58.5 131 26.7
Aqoxy3G01129 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 4.7e-06 56.6 94 36.2
EL10Ac1g02203 Beta vulgaris HOM05D004909 ORTHO05D009625 8.0e-06 55.8 35 77.1


User provided reference genes

Program Settings