Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005130g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 9.5e-181 636.7 322 100.0
Nitab4.5_0000002g0020 Nicotiana tabacum HOM05D004875 ORTHO05D005598 9.5e-165 583.6 316 94.9
Peaxi162Scf00055g00107 Petunia axillaris HOM05D004875 ORTHO05D005598 1.1e-144 516.9 317 83.0
CAN.G3.43 Capsicum annuum HOM05D004875 ORTHO05D005598 1.1e-139 500.4 317 82.3
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 7.4e-133 477.6 316 78.2
Solyc09g057920.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 1.4e-131 473.4 316 77.5
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 2.4e-99 366.3 317 59.6
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 2.0e-93 346.7 319 55.5
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 4.4e-93 345.5 312 57.4
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 7.5e-93 344.7 320 56.9
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.3e-92 344.0 308 60.1
Oeu027574.2 Olea europaea HOM05D004875 ORTHO05D005598 2.8e-92 342.8 319 56.1
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 4.8e-92 342.0 317 55.8
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 2.4e-91 339.7 315 57.5
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 4.1e-91 339.0 317 55.5
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 1.3e-89 334.0 316 54.7
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 2.9e-89 332.8 321 54.2
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 2.5e-88 329.7 301 55.8
Cpa.g.sc2.356 Carica papaya HOM05D004875 ORTHO05D005598 4.2e-88 328.9 318 52.8
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 4.7e-87 325.5 300 56.0
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 4.0e-86 322.4 318 53.1
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 8.8e-86 321.2 315 52.7
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 8.3e-84 314.7 313 52.4
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 1.1e-83 314.3 318 52.8
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 9.1e-83 311.2 321 50.2
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 1.2e-82 310.8 321 49.5
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 2.7e-82 309.7 316 50.6
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 1.0e-81 307.8 316 50.3
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 1.3e-81 307.4 315 50.8
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 1.7e-81 307.0 318 50.3
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 5.0e-81 305.4 316 49.4
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 5.0e-81 305.4 315 50.2
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.1e-80 304.3 318 48.4
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 1.9e-80 303.5 318 48.4
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.9e-80 303.5 318 48.1
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 1.9e-80 303.5 322 50.0
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 3.2e-80 302.8 315 50.5
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 2.7e-79 299.7 314 49.0
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 4.7e-79 298.9 314 49.7
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 4.7e-79 298.9 318 50.3
Sc12g0001970 Simmondsia chinensis HOM05D004875 ORTHO05D005598 1.8e-78 297.0 310 47.7
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 2.3e-78 296.6 317 48.6
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 2.0e-77 293.5 314 47.8
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.0e-77 293.5 304 48.0
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.6e-77 293.1 304 48.4
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 2.8e-76 289.7 320 46.2
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 2.8e-76 289.7 313 47.3
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 2.8e-76 289.7 316 49.4
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 6.3e-76 288.5 318 47.8
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 1.1e-75 287.7 317 45.7
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 3.8e-73 279.3 312 48.1
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 1.9e-72 276.9 316 44.9
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 1.6e-71 273.9 294 48.6
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 3.6e-71 272.7 312 49.4
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 4.7e-71 272.3 312 46.8
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 1.0e-70 271.2 316 44.6
MELO3C025696.2 Cucumis melo HOM05D004875 ORTHO05D005598 1.8e-70 270.4 312 46.5
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 6.8e-70 268.5 310 45.2
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 8.9e-70 268.1 315 45.4
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 1.2e-69 267.7 315 47.0
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 1.3e-68 264.2 319 47.0
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 2.2e-68 263.5 312 44.6
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 8.3e-68 261.5 315 44.1
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 4.1e-67 259.2 315 44.8
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 4.1e-67 259.2 316 41.8
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 7.0e-67 258.5 316 44.6
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 1.2e-66 257.7 318 44.0
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 1.6e-66 257.3 315 43.8
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 2.0e-66 256.9 319 42.0
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 3.5e-66 256.1 307 44.3
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 3.5e-66 256.1 317 42.9
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 4.6e-66 255.8 311 44.7
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 5.9e-66 255.4 315 45.4
Ca_15009_v3 Cicer arietinum L. HOM05D004875 ORTHO05D005598 1.3e-65 254.2 312 44.6
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 1.3e-65 254.2 315 43.2
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 1.7e-65 253.8 315 43.8
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 1.7e-65 253.8 315 44.4
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 3.0e-65 253.1 314 42.4
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 1.2e-63 247.7 315 44.1
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 1.6e-63 247.3 315 43.5
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 4.0e-62 242.7 318 42.5
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 5.2e-62 242.3 314 41.4
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 1.2e-61 241.1 314 41.4
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 1.7e-60 237.3 313 41.2
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 1.7e-60 237.3 313 41.2
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 3.7e-60 236.1 313 41.5
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 8.3e-60 235.0 313 41.2
unitig_0.g437 Utricularia gibba HOM05D004875 ORTHO05D005598 1.1e-59 234.6 315 43.8
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 1.9e-59 233.8 313 41.2
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 2.4e-59 233.4 314 41.4
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 1.3e-57 227.6 295 42.0
SHI19214 Sapria himalayana HOM05D004875 ORTHO05D005598 3.0e-57 226.5 319 40.4
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 1.5e-56 224.2 319 39.2
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 3.3e-56 223.0 318 36.8
Zm00001eb286340 Zea mays HOM05D004875 ORTHO05D005598 1.6e-55 220.7 307 37.8
CDE04G2228 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 2.9e-52 209.9 310 39.7
Atru.chr3.4119 Acer truncatum HOM05D004875 ORTHO05D005598 4.6e-50 202.6 187 53.5
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 6.0e-50 202.2 288 41.7
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 8.4e-44 181.8 316 35.8
PSO765G0012 Papaver somniferum HOM05D004875 ORTHO05D005598 2.6e-37 160.2 325 34.8
SEGI_14366 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 1.3e-36 157.9 328 34.5
PSO349G0337 Papaver somniferum HOM05D004875 ORTHO05D005598 4.9e-36 156.0 323 34.7
Lsat_1_v5_gn_9_14740 Lactuca sativa HOM05D000378 ORTHO05D005598 8.4e-28 128.6 194 40.7
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 1.2e-18 98.2 102 48.0
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 2.5e-16 90.5 328 24.7
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 4.8e-15 86.3 84 50.0
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 1.4e-14 84.7 84 50.0
BcaB03g16392 Brassica carinata HOM05D004875 ORTHO05D005598 1.3e-12 78.2 161 30.4
Mapoly0170s0019 Marchantia polymorpha HOM05D004875 ORTHO05D005598 8.4e-12 75.5 336 25.0
PSO170G5101 Papaver somniferum HOM05D004875 ORTHO05D005598 1.1e-06 58.5 287 23.0
BcaB06g26910 Brassica carinata HOM05D000375 ORTHO05D000240 1.8e-06 57.8 95 33.7


User provided reference genes

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