Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.8e-91 338.6 168 100.0
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 5.4e-87 324.3 167 95.8
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.1e-86 322.4 168 95.2
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 9.6e-76 287.0 153 92.8
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 2.1e-75 285.8 167 87.4
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 2.4e-74 282.3 167 86.8
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 6.9e-74 280.8 151 90.7
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 2.0e-73 279.3 167 85.6
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 4.5e-73 278.1 168 81.0
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.5e-68 263.1 167 82.0
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 1.0e-64 250.4 168 73.2
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 1.4e-63 246.5 168 73.2
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 1.9e-63 246.1 167 74.9
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 1.6e-62 243.0 153 77.8
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 2.7e-62 242.3 165 72.7
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 3.5e-62 241.9 153 78.4
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 7.9e-62 240.7 153 77.1
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 1.0e-61 240.4 153 78.4
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 1.3e-61 240.0 166 72.3
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 1.8e-61 239.6 153 77.1
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 1.8e-61 239.6 153 77.8
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 1.8e-61 239.6 158 74.7
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 3.9e-61 238.4 154 76.6
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 1.5e-60 236.5 169 69.8
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 2.5e-60 235.7 165 69.7
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 4.3e-60 235.0 155 76.1
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 4.3e-60 235.0 165 68.5
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 9.7e-60 233.8 169 68.6
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 1.3e-59 233.4 153 71.9
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 1.6e-59 233.0 153 73.9
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 1.6e-59 233.0 153 73.9
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 2.8e-59 232.3 159 69.8
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 3.7e-59 231.9 168 67.3
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 3.7e-59 231.9 205 60.5
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 4.8e-59 231.5 156 73.1
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 6.3e-59 231.1 153 75.2
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 8.2e-59 230.7 154 70.8
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 8.2e-59 230.7 154 70.8
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 1.1e-58 230.3 154 72.7
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.4e-58 229.9 153 71.2
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 1.8e-58 229.6 154 71.4
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 2.4e-58 229.2 154 74.0
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 3.1e-58 228.8 162 70.4
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 3.1e-58 228.8 168 67.3
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.1e-58 228.4 168 67.3
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 6.9e-58 227.6 153 75.2
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 9.0e-58 227.3 168 66.7
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 9.0e-58 227.3 153 70.6
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 1.2e-57 226.9 153 71.9
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 1.2e-57 226.9 156 69.9
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 2.6e-57 225.7 157 70.7
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 2.6e-57 225.7 162 67.3
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 4.5e-57 224.9 162 67.3
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 7.7e-57 224.2 158 68.4
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 7.7e-57 224.2 159 67.9
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 2.9e-56 222.2 168 63.7
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 3.8e-56 221.9 159 67.3
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 6.5e-56 221.1 165 68.5
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 8.5e-56 220.7 153 71.2
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 8.5e-56 220.7 158 67.1
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 1.9e-55 219.5 162 67.3
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.9e-55 219.5 154 72.7
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 2.5e-55 219.2 159 66.7
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 3.2e-55 218.8 153 69.3
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 3.2e-55 218.8 152 68.4
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 4.2e-55 218.4 151 69.5
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 4.2e-55 218.4 159 66.0
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 5.5e-55 218.0 191 59.7
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 7.2e-55 217.6 156 68.6
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 1.6e-54 216.5 160 67.5
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 1.6e-54 216.5 222 55.0
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 2.7e-54 215.7 152 67.1
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 2.7e-54 215.7 154 71.4
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 3.6e-54 215.3 158 66.5
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 1.0e-53 213.8 158 65.8
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 3.0e-53 212.2 158 65.8
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 5.1e-53 211.5 158 64.6
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 8.8e-53 210.7 157 67.5
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 8.8e-53 210.7 154 67.5
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 2.0e-52 209.5 158 64.6
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 2.0e-52 209.5 150 67.3
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 2.5e-52 209.1 158 64.6
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 1.4e-50 203.4 153 66.0
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 2.4e-50 202.6 158 62.0
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 4.1e-50 201.8 133 75.9
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 3.4e-49 198.7 186 56.5
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 4.5e-49 198.4 157 63.1
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 8.5e-48 194.1 162 63.0
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 1.4e-47 193.4 151 64.2
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 4.2e-47 191.8 117 76.1
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 1.8e-45 186.4 114 77.2
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 5.1e-45 184.9 113 77.0
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 3.5e-41 172.2 117 68.4
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 2.2e-40 169.5 115 69.6
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.6e-38 163.3 108 74.1
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 1.5e-36 156.8 110 71.8
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 9.7e-36 154.1 89 77.5
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 1.4e-34 150.2 90 77.8
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 1.2e-33 147.1 153 56.2
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 3.5e-33 145.6 75 94.7
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 9.1e-26 120.9 63 93.7
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 4.2e-23 112.1 156 42.3
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 8.0e-14 81.3 71 62.0
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 8.9e-13 77.8 81 61.7
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.3e-11 73.9 53 66.0
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 1.4e-10 70.5 49 57.1


User provided reference genes

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