Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005124g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.5e-53 213.0 238 100.0
Nitab4.5_0004239g0030 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.4e-24 116.7 62 90.3
Nitab4.5_0001650g0140 Nicotiana tabacum HOM05D007545 ORTHO05D009579 8.7e-22 108.2 57 91.2
Nitab4.5_0010123g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 8.7e-22 108.2 55 92.7
PGSC0003DMG400013237 Solanum tuberosum HOM05D007545 ORTHO05D009579 6.2e-20 102.1 59 79.7
Nitab4.5_0001088g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 3.1e-19 99.8 49 93.9
CAN.G222.58 Capsicum annuum HOM05D007545 ORTHO05D009579 5.3e-19 99.0 55 81.8
Solyc11g011410.3 Solanum lycopersicum HOM05D007545 ORTHO05D009579 9.0e-19 98.2 54 83.3
Peaxi162Scf00562g00002 Petunia axillaris HOM05D007545 ORTHO05D009579 4.5e-18 95.9 54 81.5
Sopen11g006210 Solanum pennellii HOM05D007545 ORTHO05D009579 4.2e-16 89.4 49 81.6
Nitab4.5_0001650g0170 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.0e-14 84.7 44 86.4
Ciclev10011347m.g Citrus clementina HOM05D007545 ORTHO05D009579 8.1e-12 75.1 62 58.1
A06p06360 Brassica napus HOM05D007545 ORTHO05D009579 4.0e-11 72.8 61 54.1
BraA06t23847Z Brassica rapa HOM05D007545 ORTHO05D009579 4.0e-11 72.8 61 54.1
Prupe.3G166000 Prunus persica HOM05D007545 ORTHO05D009579 6.9e-11 72.0 54 63.0
CARHR009650 Cardamine hirsuta HOM05D007545 ORTHO05D009579 9.0e-11 71.6 61 54.1
Ca_05835_v3 Cicer arietinum L. HOM05D007545 ORTHO05D009579 1.2e-10 71.2 62 53.2
Aa31LG1G5330 Aethionema arabicum HOM05D007545 ORTHO05D009579 1.5e-10 70.9 62 53.2
Cpa.g.sc340.2 Carica papaya HOM05D007545 ORTHO05D009579 2.0e-10 70.5 56 57.1
Thhalv10007116m.g Eutrema salsugineum HOM05D007545 ORTHO05D009579 2.0e-10 70.5 61 54.1
Sc14g0006910 Simmondsia chinensis HOM05D007545 ORTHO05D009579 2.6e-10 70.1 53 58.5
Gohir.D11G205366 Gossypium hirsutum HOM05D007545 ORTHO05D009579 3.4e-10 69.7 62 48.4
AL1G20230 Arabidopsis lyrata HOM05D007545 ORTHO05D009579 4.5e-10 69.3 62 51.6
Potri.017G131400 Populus trichocarpa HOM05D007545 ORTHO05D009579 4.5e-10 69.3 48 60.4
Sabra17G0109500 Salix brachista HOM05D007545 ORTHO05D009579 4.5e-10 69.3 48 60.4
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 5.8e-10 68.9 54 51.9
COL.COLO4_13423 Corchorus olitorius HOM05D007545 ORTHO05D009579 7.6e-10 68.6 57 50.9
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 1.0e-09 68.2 51 56.9
Lj4C259T9 Lonicera japonica HOM05D007545 ORTHO05D009579 4.9e-09 65.9 48 58.3
Sp1g08270 Schrenkiella parvula HOM05D001024 ORTHO05D009579 4.9e-09 65.9 56 51.8
AT1G09680 Arabidopsis thaliana HOM05D007545 ORTHO05D009579 6.4e-09 65.5 61 49.2
Dinv28181 Davidia involucrata HOM05D007545 ORTHO05D009579 8.4e-09 65.1 52 55.8
Gorai.007G220500 Gossypium raimondii HOM05D007545 ORTHO05D009579 8.4e-09 65.1 60 46.7
Hund13089 Selenicereus undatus HOM05D007545 ORTHO05D009579 1.4e-08 64.3 54 50.0
Gorai.004G048700 Gossypium raimondii HOM05D007545 ORTHO05D009579 1.9e-08 63.9 50 50.0
Psat2g047200 Pisum sativum HOM05D007545 ORTHO05D009579 1.9e-08 63.9 57 50.9
Nn3g18372 Nelumbo nucifera HOM05D007545 ORTHO05D009579 2.5e-08 63.5 55 49.1
THA.LOC104805633 Tarenaya hassleriana HOM05D007545 ORTHO05D009579 2.5e-08 63.5 57 50.9
Oeu030299.1 Olea europaea HOM05D007545 ORTHO05D009579 3.2e-08 63.2 48 58.3
Medtr5g077930 Medicago truncatula HOM05D007545 ORTHO05D009579 4.2e-08 62.8 57 50.9
Atru.chr1.1983 Acer truncatum HOM05D007545 ORTHO05D009579 5.5e-08 62.4 50 54.0
C05p07760 Brassica napus HOM05D007545 ORTHO05D009579 7.1e-08 62.0 54 51.9
BolC5t29527H Brassica oleracea HOM05D007545 ORTHO05D009579 7.1e-08 62.0 54 51.9
Manes.01G119900 Manihot esculenta HOM05D007545 ORTHO05D009579 9.3e-08 61.6 53 50.9
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 1.2e-07 61.2 48 54.2
Migut.K00924 Erythranthe guttata HOM05D007545 ORTHO05D009579 1.6e-07 60.8 56 55.4
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 1.6e-07 60.8 47 55.3
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 2.1e-07 60.5 57 50.9
ClCG05G010640 Citrullus lanatus HOM05D007545 ORTHO05D009579 3.5e-07 59.7 50 48.0
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 3.5e-07 59.7 48 54.2
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 4.6e-07 59.3 48 52.1
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 4.6e-07 59.3 48 52.1
TPR.G23654 Trifolium pratense HOM05D007545 ORTHO05D009579 7.9e-07 58.5 47 53.2
Lalb_Chr10g0104281 Lupinus albus HOM05D007545 ORTHO05D009579 1.3e-06 57.8 54 51.9
Hma1.2p1_0158F.1_g070060 Hydrangea macrophylla HOM05D007545 ORTHO05D009579 1.8e-06 57.4 45 60.0
Sed0020460 Sechium edule HOM05D007545 ORTHO05D009579 1.8e-06 57.4 48 50.0
ATR0753G016 Amborella trichopoda HOM05D007545 ORTHO05D009579 2.3e-06 57.0 54 46.3
PGR004G2599 Punica granatum HOM05D007545 ORTHO05D009579 3.0e-06 56.6 51 49.0
SalBow5G0095 Salvia bowleyana HOM05D007545 ORTHO05D009579 3.0e-06 56.6 41 61.0
Carub.0001s0902 Capsella rubella HOM05D007545 ORTHO05D009579 3.9e-06 56.2 51 49.0
Eucgr.F02875 Eucalyptus grandis HOM05D007545 ORTHO05D009579 3.9e-06 56.2 54 50.0
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 3.9e-06 56.2 41 58.5
VMungo0647G0528 Vigna mungo HOM05D007545 ORTHO05D009579 5.1e-06 55.8 53 50.9
FAN26G0753 Fragaria x ananassa HOM05D007545 ORTHO05D009579 8.7e-06 55.1 56 46.4
Sed0004069 Sechium edule HOM05D007545 ORTHO05D009579 8.7e-06 55.1 47 48.9


User provided reference genes

Program Settings