Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 0.0e+00 1361.3 743 100.0
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 0.0e+00 1282.3 743 94.8
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 0.0e+00 1147.9 744 85.3
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 0.0e+00 1108.6 744 83.2
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 7.0e-304 1047.0 748 80.9
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 1.9e-272 942.6 745 72.8
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 1.2e-271 939.9 745 71.9
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 2.2e-265 919.1 745 69.7
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 8.7e-262 907.1 744 69.4
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 4.0e-259 898.3 745 68.5
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 2.2e-257 892.5 773 67.1
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 3.2e-256 888.6 751 67.2
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 7.9e-255 884.0 749 67.6
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 3.0e-254 882.1 753 67.9
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 1.5e-253 879.8 750 66.9
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 1.4e-251 873.2 745 67.1
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 1.7e-249 866.3 753 65.2
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 3.8e-249 865.1 746 66.8
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 9.3e-248 860.5 726 69.8
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 2.1e-247 859.4 832 61.3
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 7.9e-247 857.4 754 65.0
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 3.0e-246 855.5 745 65.8
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 1.3e-244 850.1 722 66.6
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 3.7e-244 848.6 747 65.6
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 1.0e-241 840.5 720 66.5
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 2.2e-241 839.3 746 67.3
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 1.2e-239 833.6 752 64.9
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 4.6e-239 831.6 747 65.6
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 6.1e-239 831.2 752 65.6
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 1.1e-237 827.0 744 64.8
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 1.5e-237 826.6 746 64.3
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 2.2e-236 822.8 743 63.7
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 2.8e-236 822.4 716 66.1
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.8e-235 819.7 750 63.2
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 4.5e-234 815.1 749 62.9
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 7.7e-234 814.3 750 63.2
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 1.0e-233 813.9 752 64.2
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 1.1e-232 810.4 693 67.5
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 1.4e-232 810.1 751 63.0
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.4e-232 810.1 747 63.1
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 4.2e-232 808.5 745 64.6
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 7.2e-232 807.7 749 62.6
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 7.2e-232 807.7 747 64.0
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 9.4e-232 807.4 741 62.8
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 1.6e-231 806.6 833 59.2
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 2.7e-231 805.8 744 62.8
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 6.1e-231 804.7 747 63.1
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 6.1e-231 804.7 735 62.9
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 6.1e-231 804.7 747 63.3
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 7.9e-231 804.3 748 62.7
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 7.9e-231 804.3 753 61.9
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 3.0e-230 802.4 745 62.7
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 8.8e-230 800.8 745 62.3
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 2.6e-229 799.3 749 61.5
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 1.3e-228 797.0 746 62.1
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 1.7e-228 796.6 753 61.8
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 8.2e-228 794.3 747 62.4
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 2.4e-227 792.7 744 62.5
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 4.1e-227 792.0 753 61.8
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 1.2e-226 790.4 752 61.7
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 1.3e-225 786.9 747 62.0
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 1.7e-225 786.6 744 62.6
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 2.5e-224 782.7 753 61.5
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 4.7e-223 778.5 744 61.4
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 2.3e-222 776.2 747 61.6
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 5.2e-222 775.0 740 62.2
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 1.1e-219 767.3 763 59.9
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 3.1e-219 765.8 718 62.5
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 2.6e-218 762.7 746 60.3
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 3.5e-218 762.3 747 60.5
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 3.5e-218 762.3 747 60.5
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.7e-217 760.0 748 60.3
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 9.4e-216 754.2 715 61.7
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 1.2e-210 737.3 715 61.4
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 2.9e-209 732.6 813 55.8
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 4.2e-208 728.8 767 57.6
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 1.8e-206 723.4 747 58.1
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 4.0e-206 722.2 750 59.5
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 4.5e-202 708.8 696 59.8
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 5.9e-202 708.4 745 56.5
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 1.9e-200 703.4 746 59.0
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 1.4e-198 697.2 719 58.6
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 3.4e-197 692.6 750 57.2
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.1e-195 687.6 747 56.0
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 3.5e-194 682.6 678 60.6
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 3.8e-193 679.1 682 59.8
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 4.3e-192 675.6 800 52.8
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 3.1e-182 642.9 760 51.3
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 1.4e-166 590.9 750 48.7
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 6.0e-162 575.5 367 86.4
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 8.1e-159 565.1 615 57.6
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 5.8e-157 558.9 389 80.5
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 3.2e-155 553.1 747 47.4
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 1.8e-150 537.3 580 55.5
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 3.8e-132 476.5 363 72.2
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 2.2e-127 460.7 570 51.6
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.7e-124 451.1 298 79.5
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 9.3e-123 445.3 442 60.6
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 3.6e-122 443.4 604 49.7
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 4.6e-122 443.0 448 61.4
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 5.9e-117 426.0 281 81.5
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 2.7e-90 337.4 780 34.5
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 3.6e-82 310.5 527 43.5
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.3e-79 302.0 350 55.7
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 1.3e-79 302.0 269 65.1
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 1.1e-75 288.9 712 30.6
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 7.3e-75 286.2 745 31.9
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 2.9e-71 274.2 388 47.7
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 3.2e-70 270.8 459 42.9
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 7.0e-70 269.6 659 35.8
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 2.1e-66 258.1 742 29.5
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 5.8e-64 250.0 725 29.7
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.3e-31 142.5 141 58.9
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 4.8e-26 124.0 84 70.2
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.6e-24 118.2 140 50.7
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 5.8e-24 117.1 513 24.8
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 3.8e-23 114.4 117 57.3
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.3e-20 105.1 124 50.0
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 2.1e-18 98.6 177 43.5
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 3.7e-18 97.8 109 54.1
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 2.0e-16 92.0 93 57.0
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 3.4e-16 91.3 170 37.1
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.5e-16 90.9 75 69.3
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 1.1e-14 86.3 108 51.9
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 7.9e-13 80.1 118 39.0
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 7.9e-13 80.1 154 37.0
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 3.0e-12 78.2 69 62.3
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 1.5e-11 75.9 55 70.9
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 2.5e-11 75.1 125 41.6
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 4.3e-11 74.3 54 72.2
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 3.8e-07 61.2 65 55.4
MD15G1442500 Malus domestica HOM05D006009 ORTHO05D007389 8.5e-07 60.1 41 63.4
Rhsim13G0121700 Rhododendron simsii HOM05D003220 ORTHO05D003944 5.5e-06 57.4 52 55.8
SEGI_32656 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 9.4e-06 56.6 121 33.9


User provided reference genes

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