Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005093g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-74 282.3 131 100.0
Nitab4.5_0001037g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.5e-28 128.3 71 80.3
Nitab4.5_0003825g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.7e-27 126.3 64 89.1
Nitab4.5_0000641g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.4e-26 123.2 68 80.9
Nitab4.5_0000749g0170 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.9e-26 122.9 60 91.7
Nitab4.5_0002879g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.9e-26 122.9 62 87.1
Nitab4.5_0007833g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.3e-26 120.6 62 87.1
Nitab4.5_0007095g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-25 120.2 58 93.1
Nitab4.5_0002558g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.6e-25 119.8 62 85.5
Nitab4.5_0004282g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.1e-25 119.4 61 88.5
Nitab4.5_0007758g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.1e-25 119.4 58 91.4
Nitab4.5_0008120g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.5e-25 118.6 62 87.1
Nitab4.5_0000947g0110 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.6e-25 118.2 63 84.1
Nitab4.5_0003744g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.6e-25 118.2 59 88.1
Nitab4.5_0006505g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.9e-25 117.5 63 81.0
Nitab4.5_0002020g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.0e-24 117.1 62 85.5
Nitab4.5_0008466g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.0e-24 117.1 57 91.2
Nitab4.5_0000594g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.3e-24 116.7 57 91.2
Nitab4.5_0000736g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.3e-24 116.7 60 86.7
Nitab4.5_0000946g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-24 116.3 57 89.5
Nitab4.5_0002513g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-24 116.3 57 91.2
Nitab4.5_0004709g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-24 116.3 59 84.7
Nitab4.5_0013160g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-24 116.3 58 89.7
Nitab4.5_0001587g0090 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.3e-24 115.9 58 86.2
Nitab4.5_0006733g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.3e-24 115.9 57 91.2
Nitab4.5_0001940g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.0e-24 115.5 58 91.4
Nitab4.5_0006664g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.1e-24 114.8 63 79.4
Nitab4.5_0008914g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.7e-24 114.4 61 83.6
Nitab4.5_0002639g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.7e-24 114.0 57 87.7
Nitab4.5_0003811g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-23 113.6 58 87.9
Nitab4.5_0004319g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.9e-23 112.8 58 86.2
Nitab4.5_0006876g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.9e-23 112.8 58 87.9
Nitab4.5_0004882g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.5e-23 112.5 61 80.3
Nitab4.5_0002276g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.3e-23 111.7 58 86.2
Nitab4.5_0005490g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.3e-23 111.7 64 79.7
Nitab4.5_0002209g0220 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.6e-23 111.3 64 79.7
Nitab4.5_0002451g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.4e-23 110.9 55 89.1
Nitab4.5_0005347g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.4e-23 110.9 57 87.7
Nitab4.5_0000684g0080 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.6e-23 110.5 60 83.3
Nitab4.5_0003636g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.1e-22 109.4 73 71.2
Nitab4.5_0003859g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.1e-22 109.4 60 85.0
Nitab4.5_0000807g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.8e-22 109.0 53 90.6
Nitab4.5_0002790g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.8e-22 109.0 57 86.0
Nitab4.5_0005776g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.8e-22 109.0 54 87.0
Nitab4.5_0006882g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.8e-22 109.0 58 82.8
Nitab4.5_0002497g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-21 107.1 57 82.5
Nitab4.5_0010480g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-21 107.1 51 90.2
Nitab4.5_0003641g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-21 106.3 68 73.5
Nitab4.5_0001075g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.0e-21 105.1 57 84.2
Nitab4.5_0004216g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.0e-21 105.1 71 70.4
Nitab4.5_0004911g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-20 103.6 63 74.6
Nitab4.5_0009029g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.5e-20 103.2 50 90.0
Nitab4.5_0012681g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.5e-20 103.2 55 76.4
Nitab4.5_0002558g0180 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.4e-20 102.1 50 88.0
Nitab4.5_0003980g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.6e-20 100.9 63 66.7
Nitab4.5_0001169g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.0e-19 100.5 50 86.0
Nitab4.5_0000940g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.9e-19 99.0 70 61.4
Nitab4.5_0002892g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.8e-19 98.6 73 64.4
Nitab4.5_0003691g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.8e-19 98.6 61 68.9
Nitab4.5_0004217g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.9e-18 96.3 50 86.0
Nitab4.5_0000435g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.1e-18 94.4 59 67.8
Nitab4.5_0001460g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.1e-17 92.8 70 61.4
Nitab4.5_0006344g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.0e-17 91.3 56 67.9
Nitab4.5_0003794g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.9e-17 90.9 49 77.6
Nitab4.5_0002973g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.0e-16 90.5 43 90.7
Nitab4.5_0002496g0080 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.3e-16 89.4 66 60.6
Nitab4.5_0000963g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.9e-16 88.6 50 74.0
Nitab4.5_0003083g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.1e-16 88.2 43 83.7
Nitab4.5_0001665g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.7e-16 87.4 62 66.1
Nitab4.5_0006841g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.5e-15 86.7 50 72.0
Nitab4.5_0000339g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.5e-15 85.9 49 73.5
Nitab4.5_0002460g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.5e-15 85.9 43 88.4
Nitab4.5_0002835g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.5e-15 85.9 43 88.4
Nitab4.5_0003231g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.5e-15 85.9 60 60.0
Nitab4.5_0001224g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.3e-15 85.1 46 73.9
Nitab4.5_0000778g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.6e-15 84.0 55 69.1
Nitab4.5_0004188g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.3e-14 83.6 42 88.1
Nitab4.5_0000801g0080 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.7e-14 82.0 41 87.8
Nitab4.5_0003338g0100 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.2e-14 80.9 47 76.6
Nitab4.5_0000371g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-13 79.7 55 60.0
Nitab4.5_0007525g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-13 79.7 42 78.6
Nitab4.5_0000534g0100 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.4e-13 79.3 68 51.5
Nitab4.5_0004049g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-12 77.0 95 44.2
Nitab4.5_0004248g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.5e-12 75.1 35 94.3
Nitab4.5_0000197g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.9e-11 72.4 40 80.0
Nitab4.5_0003385g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.0e-11 71.6 38 78.9
Nitab4.5_0001161g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.9e-10 69.7 34 88.2
Nitab4.5_0001593g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.9e-10 69.7 41 70.7
Nitab4.5_0003148g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.9e-10 69.7 34 88.2
Nitab4.5_0004759g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.9e-10 69.7 41 65.9
Nitab4.5_0004735g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.5e-10 69.3 40 75.0
Nitab4.5_0004022g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.2e-10 68.6 35 82.9
Nitab4.5_0024891g0020 Nicotiana tabacum HOM05D008440 ORTHO05D001422 4.2e-10 68.6 87 36.8
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 4.2e-10 68.6 77 44.2
Nitab4.5_0000817g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.5e-10 68.2 40 70.0
Nitab4.5_0007969g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.5e-10 68.2 34 85.3
Nitab4.5_0003975g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.3e-10 67.4 34 88.2
Nitab4.5_0002081g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-09 67.0 34 85.3
Nitab4.5_0002272g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.6e-09 66.6 38 73.7
Nitab4.5_0005787g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.6e-09 66.6 32 90.6
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.1e-09 66.2 87 36.8
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 2.1e-09 66.2 91 35.2
Nitab4.5_0000235g0070 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.7e-09 65.9 87 35.6
Nitab4.5_0021888g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.7e-09 65.9 87 35.6
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.5e-09 65.5 87 35.6
Nitab4.5_0014647g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.5e-09 65.5 31 90.3
Nitab4.5_0003284g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.6e-09 65.1 41 70.7
Nitab4.5_0007629g0020 Nicotiana tabacum HOM05D006630 ORTHO05D283210 4.6e-09 65.1 50 58.0
Nitab4.5_0002252g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.1e-09 64.7 34 79.4
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 6.1e-09 64.7 91 34.1
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 6.1e-09 64.7 91 34.1
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 7.9e-09 64.3 91 33.0
Nitab4.5_0001457g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.0e-08 63.9 33 87.9
Sopen04g017310 Solanum pennellii HOM05D008695 ORTHO05D001422 1.0e-08 63.9 86 40.7
Nitab4.5_0001098g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.3e-08 63.5 33 81.8
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.3e-08 63.5 86 39.5
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-08 63.5 86 39.5
Sopen01g020530 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-08 63.2 86 39.5
Nitab4.5_0011203g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.3e-08 62.8 33 78.8
Nitab4.5_0001430g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.0e-08 62.4 38 71.1
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 3.0e-08 62.4 86 39.5
Sopen07g015290 Solanum pennellii HOM05D008695 ORTHO05D001422 3.0e-08 62.4 86 38.4
Sopen12g021080 Solanum pennellii HOM05D000047 ORTHO05D001422 3.9e-08 62.0 86 39.5
Nitab4.5_0004671g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.1e-08 61.6 28 96.4
Nitab4.5_0010860g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.1e-08 61.6 31 80.6
Sopen03g011910 Solanum pennellii HOM05D008695 ORTHO05D001422 5.1e-08 61.6 86 37.2
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 5.1e-08 61.6 86 38.4
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 5.1e-08 61.6 83 39.8
Nitab4.5_0002413g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.7e-08 61.2 35 65.7
Sopen07g017300 Solanum pennellii HOM05D008695 ORTHO05D001422 1.1e-07 60.5 85 38.8
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 1.5e-07 60.1 91 30.8
Nitab4.5_0011803g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.3e-07 58.5 32 71.9
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 4.3e-07 58.5 86 37.2
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 4.3e-07 58.5 86 37.2
Sopen12g015700 Solanum pennellii HOM05D008695 ORTHO05D001422 4.3e-07 58.5 86 37.2
Nitab4.5_0004609g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.7e-07 58.2 35 80.0
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 7.4e-07 57.8 86 38.4
Nitab4.5_0003121g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.6e-06 56.6 44 61.4
Nitab4.5_0020532g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.6e-06 56.6 72 36.1
Nitab4.5_0004100g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.8e-06 55.1 41 63.4
Nitab4.5_0008997g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.8e-06 55.1 38 60.5
Nitab4.5_0013472g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.3e-06 54.7 89 32.6
Nitab4.5_0000751g0060 Nicotiana tabacum HOM05D006630 ORTHO05D282353 8.2e-06 54.3 35 65.7


User provided reference genes

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