Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005081g0100 Nicotiana tabacum HOM05D004299 ORTHO05D003557 0.0e+00 1313.9 740 100.0
Nitab4.5_0000021g0310 Nicotiana tabacum HOM05D004299 ORTHO05D003557 8.8e-307 1056.6 736 84.5
Peaxi162Scf00745g00852 Petunia axillaris HOM05D004299 ORTHO05D003557 1.6e-143 514.2 964 43.5
Peaxi162Scf00815g00349 Petunia axillaris HOM05D004299 ORTHO05D003557 7.0e-78 296.2 796 35.7
Nitab4.5_0002193g0040 Nicotiana tabacum HOM05D004299 ORTHO05D003557 3.6e-74 283.9 740 37.7
PGSC0003DMG400026934 Solanum tuberosum HOM05D004299 ORTHO05D003557 1.8e-73 281.6 766 37.6
Nitab4.5_0000115g0360 Nicotiana tabacum HOM05D004299 ORTHO05D003557 2.2e-71 274.6 761 36.9
Sopen06g029190 Solanum pennellii HOM05D004299 ORTHO05D003557 5.4e-70 270.0 772 37.2
Solyc06g072810.4 Solanum lycopersicum HOM05D004299 ORTHO05D003557 4.7e-66 256.9 774 36.0
Oeu061066.1 Olea europaea HOM05D004299 ORTHO05D003557 9.6e-35 152.9 808 28.2
CSS0010494 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 3.6e-34 151.0 847 28.9
CSS0016343 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 3.4e-32 144.4 856 28.3
Hma1.2p1_0758F.1_g213620 Hydrangea macrophylla HOM05D004299 ORTHO05D003557 1.5e-27 129.0 208 47.6
MSTRG.13 Avicennia marina HOM05D004299 ORTHO05D003557 4.3e-27 127.5 762 29.4
Lj3A889G76 Lonicera japonica HOM05D004299 ORTHO05D003557 6.4e-23 113.6 757 27.3
CsaV3_5G005290 Cucumis sativus L. HOM05D013728 ORTHO05D003557 1.4e-22 112.5 545 30.6
Cc02_g00400 Coffea canephora HOM05D004299 ORTHO05D003557 1.2e-21 109.4 821 28.0
CsaV3_5G015680 Cucumis sativus L. HOM05D004299 ORTHO05D003557 2.1e-21 108.6 263 37.6
Migut.F00952 Erythranthe guttata HOM05D004299 ORTHO05D003557 4.6e-21 107.5 447 31.8
MELO3C005430.2 Cucumis melo HOM05D013728 ORTHO05D003557 6.0e-21 107.1 453 30.0
arahy.Tifrunner.gnm1.ann1.R3QID6 Arachis hypogaea HOM05D004299 ORTHO05D003557 3.9e-20 104.4 620 26.9
vmacro06502 Vaccinium macrocarpon HOM05D004299 ORTHO05D003557 1.5e-19 102.4 807 26.5
SalBow2G2429 Salvia bowleyana HOM05D004299 ORTHO05D003557 2.5e-19 101.7 306 35.0
Dinv29171 Davidia involucrata HOM05D004299 ORTHO05D003557 3.3e-19 101.3 133 51.1
GSVIVG01024444001 Vitis vinifera HOM05D004299 ORTHO05D003557 4.8e-18 97.4 269 38.3
Lsat_1_v5_gn_3_37901 Lactuca sativa HOM05D004299 ORTHO05D003557 6.2e-18 97.1 383 31.6
Actinidia34301 Actinidia chinensis HOM05D004299 ORTHO05D003557 1.1e-17 96.3 821 25.7
Nitab4.5_0004928g0010 Nicotiana tabacum HOM05D004299 ORTHO05D003557 1.1e-17 96.3 269 34.6
arahy.Tifrunner.gnm1.ann1.KHZX7Q Arachis hypogaea HOM05D004299 ORTHO05D003557 2.4e-17 95.1 602 28.7
Lj3g0021850 Lotus japonicus HOM05D004299 ORTHO05D003557 3.1e-17 94.7 282 35.1
ClCG01G005040 Citrullus lanatus HOM05D013728 ORTHO05D003557 4.0e-17 94.4 771 27.0
AT5G17160 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 5.3e-17 94.0 407 31.9
Actinidia08739 Actinidia chinensis HOM05D004299 ORTHO05D003557 6.9e-17 93.6 814 26.9
FAN10G3788 Fragaria x ananassa HOM05D012506 ORTHO05D003557 1.2e-16 92.8 292 34.9
Prupe.2G324100 Prunus persica HOM05D004299 ORTHO05D003557 1.2e-16 92.8 431 29.5
PGR042G3162 Punica granatum HOM05D004299 ORTHO05D003557 1.2e-16 92.8 370 33.0
Haze_00596 Corylus avellana HOM05D004299 ORTHO05D003557 1.5e-16 92.4 327 32.1
FAN10G0189 Fragaria x ananassa HOM05D012506 ORTHO05D003557 1.5e-16 92.4 291 34.0
Manes.08G164200 Manihot esculenta HOM05D004299 ORTHO05D003557 1.5e-16 92.4 831 25.9
TAR374G0649 Trochodendron aralioides HOM05D004299 ORTHO05D003557 2.0e-16 92.0 776 27.2
Medtr4g077590 Medicago truncatula HOM05D004299 ORTHO05D003557 4.5e-16 90.9 315 34.6
TAR374G1619 Trochodendron aralioides HOM05D004299 ORTHO05D003557 5.8e-16 90.5 778 27.9
ECA247G1921 Erigeron canadensis HOM05D004299 ORTHO05D003557 7.6e-16 90.1 298 31.2
Lsat_1_v5_gn_8_135240 Lactuca sativa HOM05D004299 ORTHO05D003557 7.6e-16 90.1 451 30.8
Hund21092 Selenicereus undatus HOM05D004299 ORTHO05D003557 9.9e-16 89.7 160 41.9
FAN01G2289 Fragaria x ananassa HOM05D012506 ORTHO05D003557 2.9e-15 88.2 330 31.5
AL6G28200 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 3.8e-15 87.8 374 31.0
Duzib128G1020 Durio zibethinus HOM05D004299 ORTHO05D003557 4.9e-15 87.4 133 45.9
Sed0000182 Sechium edule HOM05D004299 ORTHO05D003557 8.4e-15 86.7 443 31.6
HanXRQChr17g0554401 Helianthus annuus HOM05D004299 ORTHO05D003557 1.1e-14 86.3 439 28.7
DCAR_014573 Daucus carota HOM05D004299 ORTHO05D003557 1.4e-14 85.9 456 28.9
Glyma.12G018900 Glycine max HOM05D004299 ORTHO05D003557 3.2e-14 84.7 333 33.0
Manes.09G124200 Manihot esculenta HOM05D004299 ORTHO05D003557 3.2e-14 84.7 272 32.7
Cfa015894 Carpinus fangiana HOM05D004299 ORTHO05D003557 4.2e-14 84.3 327 33.6
Eucgr.G02658 Eucalyptus grandis HOM05D004299 ORTHO05D003557 4.2e-14 84.3 830 26.4
Sp3g02170 Schrenkiella parvula HOM05D004299 ORTHO05D003557 4.2e-14 84.3 283 31.4
CARHR196070 Cardamine hirsuta HOM05D004299 ORTHO05D003557 5.4e-14 84.0 314 33.1
Sabra19G0058100 Salix brachista HOM05D004299 ORTHO05D003557 5.4e-14 84.0 346 32.7
RcHm_v2.0_Chr1g0383881 Rosa chinensis HOM05D012506 ORTHO05D003557 1.2e-13 82.8 458 27.7
AL3G12740 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 1.6e-13 82.4 274 29.2
MBI04_g44838_MAGBIO Magnolia biondii HOM05D027374 ORTHO05D030041 1.6e-13 82.4 455 28.4
TPR.G8414 Trifolium pratense HOM05D004299 ORTHO05D003557 2.1e-13 82.0 295 33.2
Atru.chr12.1996 Acer truncatum HOM05D004299 ORTHO05D003557 3.5e-13 81.3 214 36.9
MD01G1233900 Malus domestica HOM05D004299 ORTHO05D003557 3.5e-13 81.3 454 30.0
FvH4_7g33621 Fragaria vesca HOM05D012506 ORTHO05D003557 4.6e-13 80.9 440 28.6
Aa31LG5G13610 Aethionema arabicum HOM05D004299 ORTHO05D003557 6.0e-13 80.5 429 29.1
BraA01t04590Z Brassica rapa HOM05D004299 ORTHO05D003557 1.3e-12 79.3 220 36.4
unitig_52.g17695 Utricularia gibba HOM05D004299 ORTHO05D003557 2.3e-12 78.6 277 32.5
Lalb_Chr01g0001001 Lupinus albus HOM05D004299 ORTHO05D003557 3.0e-12 78.2 295 32.9
CARHR077150 Cardamine hirsuta HOM05D004299 ORTHO05D003557 3.9e-12 77.8 292 30.5
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 3.9e-12 77.8 275 33.5
QL09p025753 Quercus lobata HOM05D004299 ORTHO05D003557 3.9e-12 77.8 807 27.8
Sc19g0000210 Simmondsia chinensis HOM05D004299 ORTHO05D003557 5.1e-12 77.4 277 29.6
Duzib106G1502 Durio zibethinus HOM05D004299 ORTHO05D003557 6.7e-12 77.0 850 24.8
CANSAT35G1347 Cannabis sativa HOM05D004299 ORTHO05D003557 1.1e-11 76.3 152 42.8
Sed0018309 Sechium edule HOM05D004299 ORTHO05D003557 1.1e-11 76.3 312 32.4
Lsat_1_v5_gn_3_37921 Lactuca sativa HOM05D004299 ORTHO05D003557 1.5e-11 75.9 444 28.8
FAN03G0789 Fragaria x ananassa HOM05D012506 ORTHO05D003557 1.9e-11 75.5 329 28.9
Gohir.A08G223300 Gossypium hirsutum HOM05D004299 ORTHO05D003557 1.9e-11 75.5 234 33.8
BraA03t10142Z Brassica rapa HOM05D004299 ORTHO05D003557 3.3e-11 74.7 598 24.9
BcaC04g18829 Brassica carinata HOM05D004299 ORTHO05D003557 5.6e-11 73.9 191 38.2
Carub.0003s0228 Capsella rubella HOM05D004299 ORTHO05D003557 5.6e-11 73.9 303 30.7
COL.COLO4_06387 Corchorus olitorius HOM05D004299 ORTHO05D003557 5.6e-11 73.9 268 34.7
C03p60040 Brassica napus HOM05D004299 ORTHO05D003557 7.4e-11 73.6 191 36.6
BolC3t18269H Brassica oleracea HOM05D004299 ORTHO05D003557 7.4e-11 73.6 191 36.6
Psat7g171480 Pisum sativum HOM05D004299 ORTHO05D003557 7.4e-11 73.6 278 31.3
Rhsim03G0220700 Rhododendron simsii HOM05D004299 ORTHO05D003557 7.4e-11 73.6 396 28.8
Thecc.05G208300 Theobroma cacao HOM05D004299 ORTHO05D003557 9.6e-11 73.2 806 25.6
Phvul.011G021300 Phaseolus vulgaris HOM05D004299 ORTHO05D003557 1.3e-10 72.8 795 24.8
Aqoxy3G02070 Aquilegia oxysepala HOM05D004299 ORTHO05D003557 3.7e-10 71.2 313 32.3
AT3G03130 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 3.7e-10 71.2 251 28.3
CiPaw.05G237300 Carya illinoinensis HOM05D004299 ORTHO05D003557 4.8e-10 70.9 430 29.1
ECA246G3276 Erigeron canadensis HOM05D004299 ORTHO05D003557 6.2e-10 70.5 449 28.3
PSO782G5567 Papaver somniferum HOM05D018639 ORTHO05D003557 1.4e-09 69.3 145 37.2
EL10Ac3g05093 Beta vulgaris HOM05D022644 ORTHO05D003557 1.8e-09 68.9 275 30.2
Glyma.11G092600 Glycine max HOM05D004299 ORTHO05D003557 2.4e-09 68.6 797 24.5
PSO017G1908 Papaver somniferum HOM05D004299 ORTHO05D003557 3.1e-09 68.2 223 31.8
PSO478G4400 Papaver somniferum HOM05D018639 ORTHO05D003557 3.1e-09 68.2 214 32.2
C03p09520 Brassica napus HOM05D004299 ORTHO05D003557 4.0e-09 67.8 262 29.4
A06p26270 Brassica napus HOM05D004299 ORTHO05D003557 5.3e-09 67.4 376 30.6
BNapus_Darmor_BZH_scaffold_78p00020 Brassica napus HOM05D004299 ORTHO05D003557 5.3e-09 67.4 376 30.6
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 5.3e-09 67.4 59 54.2
MD07G1306000 Malus domestica HOM05D004299 ORTHO05D003557 5.3e-09 67.4 515 25.8
Nn1g01977 Nelumbo nucifera HOM05D004299 ORTHO05D003557 5.3e-09 67.4 824 24.4
Nn3g19291 Nelumbo nucifera HOM05D004299 ORTHO05D003557 5.3e-09 67.4 416 25.2
HanXRQChr17g0541651 Helianthus annuus HOM05D004299 ORTHO05D003557 9.0e-09 66.6 39 82.1
Sp6g27070 Schrenkiella parvula HOM05D004299 ORTHO05D003557 1.2e-08 66.2 755 23.2
A03p08220 Brassica napus HOM05D004299 ORTHO05D003557 2.6e-08 65.1 444 24.1
Carub.0006s1534 Capsella rubella HOM05D004299 ORTHO05D003557 2.6e-08 65.1 398 29.6
Thhalv10013127m.g Eutrema salsugineum HOM05D004299 ORTHO05D003557 2.6e-08 65.1 427 26.7
PSO478G3049 Papaver somniferum HOM05D004299 ORTHO05D003557 2.6e-08 65.1 43 72.1
Zm00001eb188050 Zea mays HOM05D021310 ORTHO05D003557 2.6e-08 65.1 74 47.3
BcaB08g36802 Brassica carinata HOM05D004299 ORTHO05D003557 3.4e-08 64.7 552 25.0
Ciclev10023566m.g Citrus clementina HOM05D004299 ORTHO05D003557 5.8e-08 63.9 247 30.4
HanXRQChr05g0158421 Helianthus annuus HOM05D000441 ORTHO05D003557 5.8e-08 63.9 37 83.8
HanXRQChr12g0357091 Helianthus annuus HOM05D000441 ORTHO05D003557 5.8e-08 63.9 37 83.8
Potri.013G081600 Populus trichocarpa HOM05D004299 ORTHO05D003557 7.6e-08 63.5 817 24.6
TWI34G1775 Tripterygium wilfordii HOM05D004299 ORTHO05D003557 1.0e-07 63.2 797 25.6
BcaC03g18533 Brassica carinata HOM05D004299 ORTHO05D003557 1.3e-07 62.8 418 28.2
BNapus_Darmor_BZH_scaffold_162p00030 Brassica napus HOM05D004299 ORTHO05D003557 1.3e-07 62.8 396 27.3
BolC1t05844H Brassica oleracea HOM05D004299 ORTHO05D003557 1.3e-07 62.8 396 27.3
MELO3C026497.2 Cucumis melo HOM05D004299 ORTHO05D003557 1.3e-07 62.8 39 71.8
Potri.019G046801 Populus trichocarpa HOM05D004299 ORTHO05D003557 1.3e-07 62.8 465 28.8
MELO3C026562.2 Cucumis melo HOM05D004299 ORTHO05D003557 1.7e-07 62.4 89 43.8
Os04g0597900 Oryza sativa ssp. japonica HOM05D021310 ORTHO05D003557 2.2e-07 62.0 166 34.3
Sabra13G0071500 Salix brachista HOM05D004299 ORTHO05D003557 4.9e-07 60.8 798 23.8
BolC2t06791H Brassica oleracea HOM05D004299 ORTHO05D003557 6.5e-07 60.5 438 27.9
BcaB01g05216 Brassica carinata HOM05D004299 ORTHO05D003557 8.4e-07 60.1 608 23.8
THA.LOC104802916 Tarenaya hassleriana HOM05D004299 ORTHO05D003557 8.4e-07 60.1 426 26.3
Pp3c1_19370 Physcomitrium patens HOM05D027683 ORTHO05D003557 1.4e-06 59.3 44 68.2
Ah.04g157210 Amaranthus hybridus HOM05D022644 ORTHO05D003557 1.9e-06 58.9 336 28.6
BraA02t05360Z Brassica rapa HOM05D004299 ORTHO05D003557 5.5e-06 57.4 639 24.9
VMungo1127G2117 Vigna mungo HOM05D004299 ORTHO05D003557 5.5e-06 57.4 817 23.9
CDE02G2994 Ceratophyllum demersum HOM05D004299 ORTHO05D003557 7.1e-06 57.0 338 29.3
Gohir.D08G243500 Gossypium hirsutum HOM05D004299 ORTHO05D003557 9.3e-06 56.6 782 25.7


User provided reference genes

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