Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.2e-37 157.5 81 100.0
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 8.0e-36 153.3 81 96.3
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 1.4e-27 125.9 85 78.8
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 2.0e-26 122.1 85 76.5
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.7e-23 111.7 80 75.0
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.0e-22 108.2 80 72.5
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 1.2e-18 96.3 81 64.2
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 2.6e-18 95.1 78 61.5
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 7.5e-18 93.6 81 59.3
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 7.5e-18 93.6 80 61.2
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.3e-17 92.8 78 64.1
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.3e-17 92.8 78 64.1
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 2.2e-17 92.0 79 63.3
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 2.2e-17 92.0 82 61.0
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 3.7e-17 91.3 81 64.2
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 4.9e-17 90.9 80 62.5
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 5.4e-16 87.4 79 59.5
Solyc02g080600.1 Solanum lycopersicum HOM05D007037 ORTHO05D006691 7.0e-16 87.0 66 74.2
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 7.0e-16 87.0 85 57.6
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 4.6e-15 84.3 78 56.4
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 6.0e-15 84.0 76 59.2
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 1.0e-14 83.2 80 53.8
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 1.3e-14 82.8 79 57.0
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 1.7e-14 82.4 68 67.6
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 3.9e-14 81.3 75 60.0
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 6.6e-14 80.5 79 55.7
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 8.6e-14 80.1 77 55.8
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.5e-13 79.3 75 52.0
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 1.9e-13 79.0 78 52.6
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 2.5e-13 78.6 81 53.1
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 2.5e-13 78.6 80 55.0
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 3.3e-13 78.2 79 55.7
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 3.3e-13 78.2 80 52.5
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 1.2e-12 76.3 80 48.8
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 1.6e-12 75.9 77 50.6
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 2.1e-12 75.5 78 44.9
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 6.2e-12 73.9 81 48.1
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 8.1e-12 73.6 79 53.2
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 8.1e-12 73.6 77 48.1
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 8.1e-12 73.6 78 48.7
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.1e-11 73.2 79 50.6
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 1.1e-11 73.2 79 50.6
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 1.4e-11 72.8 80 47.5
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 1.4e-11 72.8 83 51.8
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 1.8e-11 72.4 78 52.6
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 8.9e-11 70.1 79 46.8
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 3.4e-10 68.2 77 48.1
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 5.8e-10 67.4 81 48.1
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 1.3e-09 66.2 78 46.2
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 1.7e-09 65.9 80 48.8
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 3.7e-09 64.7 80 48.8
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 4.9e-09 64.3 71 49.3
Nn1g07147 Nelumbo nucifera HOM05D009550 ORTHO05D006691 1.4e-08 62.8 85 41.2
Rhsim13G0153300 Rhododendron simsii HOM05D007037 ORTHO05D006691 2.4e-08 62.0 85 49.4
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 4.1e-08 61.2 86 41.9
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 5.4e-08 60.8 80 46.2
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 5.4e-08 60.8 79 44.3
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 5.4e-08 60.8 78 44.9
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 9.2e-08 60.1 78 38.5
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 9.2e-08 60.1 84 45.2
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 1.6e-07 59.3 84 44.0
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 1.6e-07 59.3 80 45.0
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 4.6e-07 57.8 80 41.2
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 4.6e-07 57.8 80 43.8
vmacro15807 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 4.6e-07 57.8 89 41.6
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 6.0e-07 57.4 79 41.8
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.0e-06 56.6 80 42.5
Gohir.D13G171533 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.0e-06 56.6 78 41.0
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 1.3e-06 56.2 78 38.5
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 1.3e-06 56.2 78 46.2
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 1.3e-06 56.2 75 40.0
Gohir.D13G171150 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.7e-06 55.8 78 43.6
Solyc02g032840.1 Solanum lycopersicum HOM05D007037 ORTHO05D006691 1.7e-06 55.8 57 56.1
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 2.3e-06 55.5 77 40.3
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 3.0e-06 55.1 78 38.5
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 3.0e-06 55.1 75 40.0
TAR626G0921 Trochodendron aralioides HOM05D007037 ORTHO05D006691 3.0e-06 55.1 63 50.8
unitig_748.g7588 Utricularia gibba HOM05D007037 ORTHO05D006691 3.0e-06 55.1 78 41.0
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 3.9e-06 54.7 77 44.2
DCAR_019271 Daucus carota HOM05D007037 ORTHO05D006691 3.9e-06 54.7 85 42.4
Gorai.013G189700 Gossypium raimondii HOM05D007037 ORTHO05D006691 3.9e-06 54.7 77 40.3
HanXRQChr16g0506491 Helianthus annuus HOM05D007037 ORTHO05D006691 3.9e-06 54.7 78 39.7
QL03p067197 Quercus lobata HOM05D003533 ORTHO05D004009 3.9e-06 54.7 78 43.6
Aqoxy4G01827 Aquilegia oxysepala HOM05D009550 ORTHO05D006691 8.6e-06 53.5 84 40.5


User provided reference genes

Program Settings