Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005050g0030 Nicotiana tabacum HOM05D005802 ORTHO05D006992 5.9e-130 467.6 249 100.0
Nitab4.5_0001329g0060 Nicotiana tabacum HOM05D005802 ORTHO05D006992 2.0e-109 399.4 257 86.0
Peaxi162Scf01052g00014 Petunia axillaris HOM05D005802 ORTHO05D006992 1.1e-99 367.1 267 75.7
PGSC0003DMG400007022 Solanum tuberosum HOM05D005802 ORTHO05D006992 5.0e-97 358.2 266 74.4
Solyc05g050900.4 Solanum lycopersicum HOM05D005802 ORTHO05D006992 2.5e-96 355.9 266 74.1
Sopen05g029380 Solanum pennellii HOM05D005802 ORTHO05D006992 9.5e-96 354.0 266 73.7
CAN.G106.25 Capsicum annuum HOM05D005802 ORTHO05D006992 8.0e-95 350.9 265 71.7
Migut.B01600 Erythranthe guttata HOM05D005802 ORTHO05D006992 1.2e-79 300.4 265 60.4
MSTRG.17165 Avicennia marina HOM05D005802 ORTHO05D006992 2.1e-79 299.7 265 60.8
CSS0000774 Camellia sinensis var. sinensis HOM05D005802 ORTHO05D006992 8.1e-79 297.7 267 61.0
QL04p039160 Quercus lobata HOM05D005802 ORTHO05D006992 2.2e-76 289.7 262 61.5
Rhsim01G0150000 Rhododendron simsii HOM05D005802 ORTHO05D006992 2.9e-76 289.3 268 59.3
Actinidia12678 Actinidia chinensis HOM05D005802 ORTHO05D006992 4.1e-75 285.4 263 60.8
COL.COLO4_12497 Corchorus olitorius HOM05D005802 ORTHO05D006992 7.1e-75 284.6 278 60.1
Duzib133G1160 Durio zibethinus HOM05D005802 ORTHO05D006992 1.6e-74 283.5 268 60.4
SalBow5G5068 Salvia bowleyana HOM05D005802 ORTHO05D006992 4.6e-74 282.0 265 58.1
CiPaw.13G033000 Carya illinoinensis HOM05D005802 ORTHO05D006992 6.0e-74 281.6 268 58.6
DCAR_025098 Daucus carota HOM05D005802 ORTHO05D006992 6.0e-74 281.6 269 57.6
Gohir.A12G094400 Gossypium hirsutum HOM05D005802 ORTHO05D006992 1.3e-73 280.4 267 59.9
Gohir.D12G097200 Gossypium hirsutum HOM05D005802 ORTHO05D006992 1.7e-73 280.0 267 59.9
Gorai.008G105800 Gossypium raimondii HOM05D005802 ORTHO05D006992 3.9e-73 278.9 266 59.4
Lj3g0015572 Lotus japonicus HOM05D005802 ORTHO05D006992 5.1e-73 278.5 270 58.9
Thecc.01G381900 Theobroma cacao HOM05D005802 ORTHO05D006992 8.7e-73 277.7 272 59.9
Ciclev10021687m.g Citrus clementina HOM05D005802 ORTHO05D006992 1.1e-72 277.3 267 58.8
Phvul.010G077700 Phaseolus vulgaris HOM05D005802 ORTHO05D006992 1.9e-72 276.6 274 58.0
Atru.chr5.259 Acer truncatum HOM05D005802 ORTHO05D006992 3.3e-72 275.8 267 59.9
Cpa.g.sc49.162 Carica papaya HOM05D005802 ORTHO05D006992 4.3e-72 275.4 271 59.8
Haze_02673 Corylus avellana HOM05D005802 ORTHO05D006992 4.3e-72 275.4 274 58.4
CANSAT56G0664 Cannabis sativa HOM05D005802 ORTHO05D006992 7.3e-72 274.6 271 56.8
HanXRQChr03g0088101 Helianthus annuus HOM05D005802 ORTHO05D006992 1.6e-71 273.5 275 56.4
PGR042G3152 Punica granatum HOM05D005802 ORTHO05D006992 1.6e-71 273.5 270 55.9
AUR62004168 Chenopodium quinoa HOM05D005802 ORTHO05D006992 2.1e-71 273.1 261 58.6
arahy.Tifrunner.gnm1.ann1.I9SF1K Arachis hypogaea HOM05D005802 ORTHO05D006992 2.8e-71 272.7 269 57.6
GSVIVG01027639001 Vitis vinifera HOM05D005802 ORTHO05D006992 2.8e-71 272.7 268 58.6
Potri.014G060000 Populus trichocarpa HOM05D005802 ORTHO05D006992 3.6e-71 272.3 268 57.8
Glyma.01G137000 Glycine max HOM05D005802 ORTHO05D006992 8.1e-71 271.2 270 57.0
THA.LOC104802463 Tarenaya hassleriana HOM05D005802 ORTHO05D006992 8.1e-71 271.2 272 57.7
Lsat_1_v5_gn_4_44621 Lactuca sativa HOM05D005802 ORTHO05D006992 1.1e-70 270.8 269 58.0
TAR375G0577 Trochodendron aralioides HOM05D005802 ORTHO05D006992 1.4e-70 270.4 268 56.7
MD02G1209900 Malus domestica HOM05D005802 ORTHO05D006992 1.8e-70 270.0 267 55.8
AUR62013665 Chenopodium quinoa HOM05D005802 ORTHO05D006992 2.4e-70 269.6 273 56.0
ECA234G0875 Erigeron canadensis HOM05D005802 ORTHO05D006992 2.4e-70 269.6 263 59.3
Cc02_g24280 Coffea canephora HOM05D005802 ORTHO05D006992 5.2e-70 268.5 267 55.4
Prupe.2G138600 Prunus persica HOM05D005802 ORTHO05D006992 9.0e-70 267.7 269 54.6
Manes.05G048500 Manihot esculenta HOM05D005802 ORTHO05D006992 2.6e-69 266.2 268 56.7
Sc02g0002770 Simmondsia chinensis HOM05D005802 ORTHO05D006992 2.6e-69 266.2 268 56.0
TPR.G5024 Trifolium pratense HOM05D005802 ORTHO05D006992 5.8e-69 265.0 268 58.2
BolC8t51149H Brassica oleracea HOM05D005802 ORTHO05D006992 1.3e-68 263.8 269 53.9
Eucgr.D02489 Eucalyptus grandis HOM05D005802 ORTHO05D006992 1.7e-68 263.5 268 56.7
Nn6g34003 Nelumbo nucifera HOM05D005802 ORTHO05D006992 1.7e-68 263.5 275 55.6
Sabra14G0043900 Salix brachista HOM05D005802 ORTHO05D006992 2.2e-68 263.1 278 56.5
Hund27376 Selenicereus undatus HOM05D005802 ORTHO05D006992 3.8e-68 262.3 252 57.5
Aa31LG10G14950 Aethionema arabicum HOM05D005802 ORTHO05D006992 6.4e-68 261.5 272 55.1
CARHR171060 Cardamine hirsuta HOM05D005802 ORTHO05D006992 8.4e-68 261.2 272 55.1
Medtr4g026180 Medicago truncatula HOM05D005802 ORTHO05D006992 8.4e-68 261.2 264 56.4
C08p35600 Brassica napus HOM05D005802 ORTHO05D006992 1.1e-67 260.8 272 52.9
Psat7g217800 Pisum sativum HOM05D005802 ORTHO05D006992 1.1e-67 260.8 265 56.2
AT3G60660 Arabidopsis thaliana HOM05D005802 ORTHO05D006992 2.4e-67 259.6 272 54.4
Dinv44124 Davidia involucrata HOM05D005802 ORTHO05D006992 2.4e-67 259.6 256 57.8
Cfa011175 Carpinus fangiana HOM05D005802 ORTHO05D006992 3.2e-67 259.2 258 57.8
AL5G42970 Arabidopsis lyrata HOM05D005802 ORTHO05D006992 4.2e-67 258.8 272 53.3
BcaC07g40584 Brassica carinata HOM05D005802 ORTHO05D006992 4.2e-67 258.8 274 53.6
TWI23G1076 Tripterygium wilfordii HOM05D005802 ORTHO05D006992 5.4e-67 258.5 268 55.6
A09p52850 Brassica napus HOM05D005802 ORTHO05D006992 9.3e-67 257.7 272 52.6
arahy.Tifrunner.gnm1.ann1.GQKS8P Arachis hypogaea HOM05D005802 ORTHO05D006992 1.2e-66 257.3 305 51.5
RcHm_v2.0_Chr5g0028911 Rosa chinensis HOM05D005802 ORTHO05D006992 1.6e-66 256.9 274 51.5
ClCG09G008930 Citrullus lanatus HOM05D005802 ORTHO05D006992 6.0e-66 255.0 268 54.5
FAN06G3617 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.0e-65 254.2 275 52.4
FAN06G1875 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.7e-65 253.4 285 50.9
Sp5g02580 Schrenkiella parvula HOM05D005802 ORTHO05D006992 3.9e-65 252.3 272 52.9
Thhalv10006164m.g Eutrema salsugineum HOM05D005802 ORTHO05D006992 5.1e-65 251.9 271 53.5
FAN10G1300 Fragaria x ananassa HOM05D005802 ORTHO05D006992 5.1e-65 251.9 275 52.4
PSO478G1061 Papaver somniferum HOM05D005802 ORTHO05D006992 1.1e-64 250.8 269 52.8
Sed0027573 Sechium edule HOM05D005802 ORTHO05D006992 1.1e-64 250.8 267 53.9
PSO017G7043 Papaver somniferum HOM05D005802 ORTHO05D006992 1.9e-64 250.0 269 52.8
vmacro21028 Vaccinium macrocarpon HOM05D005802 ORTHO05D006992 1.9e-64 250.0 254 55.9
FAN10G3200 Fragaria x ananassa HOM05D005802 ORTHO05D006992 2.5e-64 249.6 275 52.4
CsaV3_7G026130 Cucumis sativus L. HOM05D005802 ORTHO05D006992 3.3e-64 249.2 268 53.7
FAN03G1851 Fragaria x ananassa HOM05D005802 ORTHO05D006992 3.3e-64 249.2 275 51.3
Aqoxy7G00743 Aquilegia oxysepala HOM05D005802 ORTHO05D006992 1.6e-63 246.9 271 52.8
Carub.0005s2750 Capsella rubella HOM05D005802 ORTHO05D006992 4.8e-63 245.4 255 54.9
FAN01G2984 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.8e-62 243.4 284 49.6
SGA_v2.0_scaffold153G36973 Striga asiatica HOM05D005802 ORTHO05D006992 1.8e-62 243.4 265 52.5
Carub.0005s2739 Capsella rubella HOM05D005802 ORTHO05D006992 1.9e-59 233.4 264 52.3
VMungo0331G0187 Vigna mungo HOM05D005802 ORTHO05D006992 4.2e-59 232.3 246 56.1
ATR1153G072 Amborella trichopoda HOM05D005802 ORTHO05D006992 1.6e-58 230.3 270 48.9
BraA09t40717Z Brassica rapa HOM05D005802 ORTHO05D006992 3.0e-57 226.1 337 42.7
Actinidia28320 Actinidia chinensis HOM05D005802 ORTHO05D006992 7.4e-56 221.5 217 58.1
FvH4_7g11150 Fragaria vesca HOM05D005802 ORTHO05D006992 2.1e-55 219.9 245 51.4
Os07g0484500 Oryza sativa ssp. japonica HOM05D005802 ORTHO05D006992 7.6e-53 211.5 268 45.5
Zm00001eb321530 Zea mays HOM05D005802 ORTHO05D006992 2.1e-50 203.4 269 43.9
Lj7A534G38 Lonicera japonica HOM05D000908 ORTHO05D000789 1.0e-49 201.1 214 56.5
Ca_02431_v3 Cicer arietinum L. HOM05D005802 ORTHO05D006992 3.3e-48 196.1 252 48.4
EL10Ac1g00841 Beta vulgaris HOM05D005802 ORTHO05D006992 1.6e-47 193.7 237 48.5
CDE04G3422 Ceratophyllum demersum HOM05D005802 ORTHO05D006992 1.3e-44 184.1 285 41.4
Oeu051925.1 Olea europaea HOM05D005802 ORTHO05D006992 2.9e-44 183.0 235 48.5
Mapoly0010s0189 Marchantia polymorpha HOM05D005802 ORTHO05D006992 9.3e-43 177.9 258 43.0
TAR375G0251 Trochodendron aralioides HOM05D005802 ORTHO05D006992 3.7e-39 166.0 189 50.3
Lalb_Chr12g0208021 Lupinus albus HOM05D005802 ORTHO05D006992 5.3e-38 162.2 180 51.1
Oeu051926.1 Olea europaea HOM05D005802 ORTHO05D006992 5.9e-37 158.7 147 55.1
Pp3c6_12030 Physcomitrium patens HOM05D005802 ORTHO05D006992 8.5e-36 154.8 265 38.5
AagrBONN_evm.TU.Sc2ySwM_368.1567 Anthoceros agrestis HOM05D005802 ORTHO05D006992 1.4e-35 154.1 264 35.2
RcHm_v2.0_Chr1g0349231 Rosa chinensis HOM05D005802 ORTHO05D006992 1.6e-34 150.6 193 45.6
Oeu055514.1 Olea europaea HOM05D005802 ORTHO05D006992 5.1e-33 145.6 135 58.5
SMO347G0664 Selaginella moellendorffii HOM05D005802 ORTHO05D006992 5.7e-32 142.1 228 38.6
MELO3C021033.2 Cucumis melo HOM05D005802 ORTHO05D006992 2.2e-31 140.2 195 47.2
Ah.05g173880 Amaranthus hybridus HOM05D005802 ORTHO05D006992 1.1e-30 137.9 103 69.9
FAN03G0906 Fragaria x ananassa HOM05D005802 ORTHO05D006992 3.1e-30 136.3 110 64.5
FAN03G0348 Fragaria x ananassa HOM05D005802 ORTHO05D006992 5.3e-30 135.6 110 63.6
Actinidia33479 Actinidia chinensis HOM05D005802 ORTHO05D006992 1.2e-26 124.4 88 67.0
Ah.05g173870 Amaranthus hybridus HOM05D005802 ORTHO05D006992 3.6e-26 122.9 108 56.5
RcHm_v2.0_Chr1g0349241 Rosa chinensis HOM05D005802 ORTHO05D006992 3.9e-25 119.4 104 59.6
SHI22577 Sapria himalayana HOM05D005802 ORTHO05D006992 2.0e-24 117.1 101 58.4
Hma1.2p1_0072F.1_g038280 Hydrangea macrophylla HOM05D005802 ORTHO05D006992 1.7e-23 114.0 100 64.0
RcHm_v2.0_Chr1g0349201 Rosa chinensis HOM05D005802 ORTHO05D006992 2.2e-23 113.6 342 29.5
Cc00_g05160 Coffea canephora HOM05D005802 ORTHO05D006992 3.7e-23 112.8 105 59.0
Glyma.03G031466 Glycine max HOM05D005802 ORTHO05D006992 7.0e-22 108.6 80 66.2
Cc00_g05150 Coffea canephora HOM05D005802 ORTHO05D006992 9.1e-22 108.2 107 56.1
Oeu045806.1 Olea europaea HOM05D005802 ORTHO05D006992 2.6e-21 106.7 74 73.0
RcHm_v2.0_Chr1g0349251 Rosa chinensis HOM05D005802 ORTHO05D006992 1.0e-20 104.8 80 65.0
Lalb_Chr12g0208011 Lupinus albus HOM05D005802 ORTHO05D006992 1.4e-19 100.9 74 70.3
FAN10G4230 Fragaria x ananassa HOM05D005802 ORTHO05D006992 8.0e-18 95.1 184 38.0
Dinv44127 Davidia involucrata HOM05D005802 ORTHO05D006992 2.3e-17 93.6 226 33.6
RcHm_v2.0_Chr1g0349171 Rosa chinensis HOM05D005802 ORTHO05D006992 8.8e-17 91.7 55 80.0
SHI22578 Sapria himalayana HOM05D005802 ORTHO05D006992 1.5e-16 90.9 83 59.0
CARHR170760 Cardamine hirsuta HOM05D005802 ORTHO05D006992 2.0e-16 90.5 80 58.8
CBR_g48776 Chara braunii HOM05D005802 ORTHO05D006992 1.2e-13 81.3 243 28.0
RcHm_v2.0_Chr1g0349161 Rosa chinensis HOM05D005802 ORTHO05D006992 4.5e-13 79.3 99 47.5
Cre16.g672500 Chlamydomonas reinhardtii HOM05D005802 ORTHO05D006992 3.8e-12 76.3 271 28.8
C04p32020 Brassica napus HOM05D010895 ORTHO05D012939 5.0e-12 75.9 101 45.5
BolC4t24754H Brassica oleracea HOM05D005802 ORTHO05D006992 5.0e-12 75.9 101 45.5
Glyma.03G031532 Glycine max HOM05D005802 ORTHO05D006992 1.2e-08 64.7 82 45.1


User provided reference genes

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