Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 0.0e+00 1090.9 566 100.0
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 7.9e-215 750.7 498 82.9
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 8.8e-198 694.1 501 76.0
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 3.4e-189 665.6 481 76.5
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 2.9e-185 652.5 481 76.1
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 5.2e-182 641.7 543 68.1
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 3.7e-180 635.6 479 73.1
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 5.4e-147 525.4 470 60.4
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 7.6e-141 505.0 483 58.0
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 1.2e-133 481.1 493 54.6
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 7.6e-133 478.4 454 57.3
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 3.8e-132 476.1 525 52.8
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 2.4e-131 473.4 457 57.1
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 2.4e-131 473.4 469 55.4
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 3.2e-131 473.0 475 56.4
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 4.6e-130 469.2 484 54.8
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 6.6e-129 465.3 461 55.5
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 3.3e-128 463.0 479 54.3
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 4.3e-128 462.6 482 54.8
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 5.6e-128 462.2 455 56.5
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 7.4e-128 461.8 471 54.6
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 2.8e-127 459.9 460 56.1
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 8.1e-127 458.4 460 55.7
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 3.1e-126 456.4 466 55.2
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.5e-125 454.1 460 55.4
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 2.6e-125 453.4 472 52.8
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 5.8e-125 452.2 481 53.0
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 7.6e-125 451.8 461 54.2
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 9.9e-125 451.4 477 54.3
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 1.3e-124 451.1 463 55.3
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 1.4e-123 447.6 475 53.3
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.9e-123 447.2 460 54.3
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 2.4e-123 446.8 461 55.1
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 5.5e-123 445.7 468 53.8
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 4.6e-122 442.6 472 52.3
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 6.0e-122 442.2 488 50.2
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 7.9e-122 441.8 478 52.7
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 2.5e-120 436.8 511 51.1
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 4.3e-120 436.0 478 52.1
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 4.3e-120 436.0 476 51.9
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 7.4e-120 435.3 477 51.8
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.3e-119 434.5 464 52.6
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 2.1e-119 433.7 473 51.6
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 2.8e-119 433.3 452 54.0
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 3.7e-119 433.0 459 51.6
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 6.2e-119 432.2 484 51.9
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 1.8e-118 430.6 477 51.2
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 3.1e-118 429.9 460 53.5
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 2.0e-117 427.2 456 52.0
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 1.3e-116 424.5 479 51.6
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 6.5e-116 422.2 467 51.4
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 9.3e-115 418.3 466 50.9
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.2e-114 417.9 481 50.5
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 2.7e-114 416.8 460 51.3
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 1.3e-113 414.5 421 55.3
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 2.3e-113 413.7 476 50.0
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 4.3e-112 409.5 455 50.3
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 4.3e-112 409.5 478 50.2
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 1.6e-111 407.5 504 49.4
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 2.1e-111 407.1 463 50.3
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 2.1e-111 407.1 340 61.8
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 2.8e-111 406.8 494 49.6
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 8.2e-111 405.2 495 49.1
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 1.1e-110 404.8 451 51.0
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 1.8e-110 404.1 502 52.8
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 9.0e-110 401.7 351 59.5
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 9.0e-110 401.7 351 59.5
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 1.7e-108 397.5 485 46.4
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 3.8e-108 396.4 462 49.4
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 8.5e-108 395.2 529 45.0
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 3.2e-107 393.3 441 51.0
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 1.1e-104 384.8 523 45.5
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 2.5e-104 383.6 491 46.4
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 2.5e-104 383.6 395 55.9
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 8.2e-103 378.6 466 46.6
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 1.8e-102 377.5 471 46.3
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 9.0e-102 375.2 475 45.7
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 9.0e-102 375.2 365 55.9
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 4.5e-101 372.9 448 46.9
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 5.0e-100 369.4 482 46.3
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 6.5e-100 369.0 479 44.1
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 8.5e-100 368.6 472 45.6
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 3.2e-99 366.7 470 44.9
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 7.2e-99 365.5 479 46.3
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.4e-97 361.3 479 45.9
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 1.1e-96 358.2 460 47.2
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 9.7e-96 355.1 482 45.6
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 2.6e-93 347.1 506 43.5
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 4.5e-93 346.3 502 42.8
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 2.5e-91 340.5 350 54.6
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 4.2e-91 339.7 506 41.3
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 1.0e-89 335.1 487 44.4
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 2.6e-88 330.5 433 43.9
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 2.1e-82 310.8 375 49.1
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 8.2e-79 298.9 424 44.8
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.9e-76 290.4 456 41.9
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 5.0e-76 289.7 455 40.4
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 3.4e-64 250.4 454 37.7
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 4.4e-64 250.0 361 40.7
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 1.3e-63 248.4 360 42.2
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 2.8e-63 247.3 494 34.4
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 1.5e-59 235.0 197 62.9
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 4.0e-57 226.9 328 44.2
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 4.1e-54 216.9 333 39.6
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.4e-46 191.8 234 46.2
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 2.5e-43 181.0 271 43.9
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 9.5e-43 179.1 216 49.1
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 9.5e-43 179.1 218 48.2
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 2.0e-40 171.4 209 48.3
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 2.1e-37 161.4 137 58.4
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 6.0e-29 133.3 139 52.5
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 1.9e-27 128.3 188 40.4
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.5e-19 102.1 90 57.8
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 1.3e-18 99.0 156 42.9
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 1.2e-13 82.4 486 23.0
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.6e-10 72.0 70 50.0
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 1.1e-09 69.3 125 36.0
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.4e-09 68.9 124 35.5
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.2e-08 65.9 87 43.7
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 7.1e-06 56.6 37 70.3


User provided reference genes

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