Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 0.0e+00 1211.8 800 100.0
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.2e-298 1029.6 822 87.8
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 7.0e-217 758.1 796 61.8
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.6e-208 730.3 801 60.9
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 3.0e-207 726.1 862 61.9
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 6.8e-196 688.3 796 55.0
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 3.5e-131 473.4 643 50.5
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 8.4e-69 266.2 794 30.0
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 3.3e-57 227.6 777 31.4
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 3.6e-56 224.2 814 34.2
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 5.3e-47 193.7 751 28.0
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 2.9e-45 188.0 776 26.5
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 8.4e-45 186.4 697 28.4
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 1.8e-42 178.7 173 53.8
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.8e-42 178.7 797 26.3
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.8e-42 178.7 122 71.3
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 3.9e-42 177.6 121 70.2
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.1e-41 176.0 155 58.1
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 1.9e-41 175.3 164 57.3
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 9.6e-41 172.9 701 26.5
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 2.1e-40 171.8 793 24.5
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.7e-40 171.0 170 54.7
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.8e-39 168.7 153 56.2
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.2e-38 166.0 225 44.9
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.5e-38 165.6 228 45.2
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.0e-38 165.2 227 44.1
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 3.4e-38 164.5 206 48.5
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.7e-37 162.2 228 43.9
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 2.2e-37 161.8 184 50.0
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 3.8e-37 161.0 121 62.8
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.1e-36 159.5 154 55.8
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.1e-36 159.5 776 24.6
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.9e-36 158.7 117 65.0
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.5e-36 158.3 205 44.4
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.5e-36 158.3 121 65.3
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 7.2e-36 156.8 123 66.7
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 9.3e-36 156.4 122 64.8
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.2e-35 156.0 165 51.5
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 2.1e-35 155.2 773 24.2
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 2.7e-35 154.8 219 43.4
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 3.5e-35 154.5 121 66.1
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.5e-35 154.5 180 47.8
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.9e-35 153.3 121 63.6
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 7.9e-35 153.3 121 63.6
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.8e-34 152.1 124 59.7
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 1.9e-33 148.7 122 60.7
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.9e-33 148.7 183 47.5
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 2.5e-33 148.3 155 51.0
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.3e-33 147.9 770 24.5
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.6e-32 145.6 777 25.6
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 2.2e-32 145.2 122 58.2
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.7e-32 144.4 774 24.8
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 3.7e-32 144.4 237 40.5
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 8.2e-32 143.3 243 39.5
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.1e-31 142.9 231 42.4
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 4.1e-31 141.0 164 47.0
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 7.7e-30 136.7 123 55.3
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.3e-29 136.0 120 58.3
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.7e-29 135.6 140 47.9
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.2e-29 135.2 798 23.7
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.1e-28 132.9 232 36.6
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 3.2e-28 131.3 210 40.0
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 7.2e-28 130.2 171 46.2
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 9.4e-28 129.8 123 55.3
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.2e-27 129.4 779 23.2
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.1e-27 128.6 185 40.0
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 2.7e-27 128.3 121 54.5
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 7.9e-27 126.7 121 54.5
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.0e-26 126.3 122 54.1
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.4e-26 125.9 229 36.2
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.4e-26 125.9 163 47.2
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 3.0e-26 124.8 122 53.3
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 5.1e-26 124.0 121 54.5
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 4.3e-25 120.9 121 52.9
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 5.7e-25 120.6 129 49.6
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 7.4e-25 120.2 184 41.3
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 9.7e-25 119.8 207 37.7
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 2.2e-24 118.6 805 21.7
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 1.1e-23 116.3 149 42.3
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.4e-23 115.9 121 47.9
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.4e-23 115.9 228 36.0
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 3.1e-23 114.8 226 35.4
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 4.1e-23 114.4 221 32.6
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 9.1e-23 113.2 221 33.0
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 1.2e-22 112.8 221 33.0
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 1.5e-22 112.5 221 33.9
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 1.5e-22 112.5 219 34.7
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.0e-21 109.8 229 33.2
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 1.7e-21 109.0 203 34.5
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 3.8e-21 107.8 210 37.6
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 1.4e-20 105.9 141 41.1
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 3.2e-20 104.8 188 36.2
PGSC0003DMG402013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 1.4e-18 99.4 82 62.2
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 3.3e-17 94.7 247 31.2
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 3.7e-16 91.3 134 36.6
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 3.7e-16 91.3 98 46.9
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 4.8e-16 90.9 124 47.6
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 8.2e-16 90.1 116 40.5
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 5.3e-15 87.4 127 41.7
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 2.6e-14 85.1 106 41.5
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.5e-14 84.7 168 28.0
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 3.5e-14 84.7 170 31.2
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 4.5e-14 84.3 66 62.1
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 6.5e-13 80.5 138 33.3
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 6.5e-13 80.5 138 33.3
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 4.2e-12 77.8 88 48.9
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.6e-11 75.9 48 70.8
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 2.1e-11 75.5 128 30.5
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 6.1e-11 73.9 174 35.1
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 7.5e-09 67.0 54 55.6
Lj4A308T27 Lonicera japonica HOM05D006771 ORTHO05D008296 3.5e-06 58.2 84 35.7


User provided reference genes

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