Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005018g0010 Nicotiana tabacum HOM05D000169 ORTHO05D004780 2.3e-84 315.5 153 100.0
Peaxi162Scf00015g00126 Petunia axillaris HOM05D000169 ORTHO05D004780 3.6e-45 185.3 179 59.8
CAN.G144.4 Capsicum annuum HOM05D000169 ORTHO05D004780 1.4e-44 183.3 179 58.1
Nitab4.5_0001315g0060 Nicotiana tabacum HOM05D000169 ORTHO05D004780 1.8e-44 183.0 179 58.7
Nitab4.5_0011683g0010 Nicotiana tabacum HOM05D000169 ORTHO05D004780 5.2e-44 181.4 179 58.1
PGSC0003DMG400026465 Solanum tuberosum HOM05D000169 ORTHO05D004780 5.7e-43 177.9 179 57.0
Nitab4.5_0002859g0130 Nicotiana tabacum HOM05D000169 ORTHO05D004780 7.5e-43 177.6 179 57.0
Peaxi162Scf00034g00413 Petunia axillaris HOM05D000169 ORTHO05D004780 1.7e-42 176.4 190 53.7
Nitab4.5_0001968g0110 Nicotiana tabacum HOM05D000169 ORTHO05D004780 2.8e-42 175.6 179 55.9
Nitab4.5_0003054g0010 Nicotiana tabacum HOM05D000169 ORTHO05D004780 6.3e-42 174.5 176 59.1
Solyc12g044300.2 Solanum lycopersicum HOM05D000169 ORTHO05D004780 1.1e-41 173.7 179 55.9
Sopen12g022540 Solanum pennellii HOM05D000169 ORTHO05D004780 1.1e-41 173.7 179 55.9
CAN.G438.32 Capsicum annuum HOM05D000169 ORTHO05D004780 1.8e-41 172.9 179 56.4
Dinv30473 Davidia involucrata HOM05D000169 ORTHO05D004780 5.0e-39 164.9 179 52.5
Lj5A57T75 Lonicera japonica HOM05D000169 ORTHO05D004780 8.6e-39 164.1 162 56.2
Haze_16349 Corylus avellana HOM05D000169 ORTHO05D004780 1.1e-38 163.7 185 49.7
MD17G1190300 Malus domestica HOM05D000169 ORTHO05D004780 2.5e-38 162.5 179 51.4
SalBow2G1665 Salvia bowleyana HOM05D000169 ORTHO05D004780 2.5e-38 162.5 177 52.5
Actinidia21686 Actinidia chinensis HOM05D000169 ORTHO05D004780 4.3e-38 161.8 190 48.9
MSTRG.11049 Avicennia marina HOM05D000169 ORTHO05D004780 4.3e-38 161.8 180 52.2
EL10Ac9g22056 Beta vulgaris HOM05D000169 ORTHO05D004780 4.3e-38 161.8 179 51.4
MD09G1208800 Malus domestica HOM05D000169 ORTHO05D004780 4.3e-38 161.8 179 52.0
CSS0039624 Camellia sinensis var. sinensis HOM05D000169 ORTHO05D004780 2.1e-37 159.5 190 49.5
Migut.I00934 Erythranthe guttata HOM05D000169 ORTHO05D004780 2.1e-37 159.5 179 50.8
Hma1.2p1_1195F.1_g265900 Hydrangea macrophylla HOM05D000169 ORTHO05D004780 2.1e-37 159.5 179 50.8
vmacro18881 Vaccinium macrocarpon HOM05D000169 ORTHO05D004780 3.6e-37 158.7 190 48.4
Ah.01g021720 Amaranthus hybridus HOM05D000169 ORTHO05D004780 4.7e-37 158.3 180 50.6
Prupe.3G065200 Prunus persica HOM05D000169 ORTHO05D004780 8.0e-37 157.5 179 49.7
GSVIVG01017056001 Vitis vinifera HOM05D000169 ORTHO05D004780 1.0e-36 157.1 178 50.0
unitig_748.g7432 Utricularia gibba HOM05D000169 ORTHO05D004780 1.8e-36 156.4 179 52.0
Cc04_g02950 Coffea canephora HOM05D000169 ORTHO05D004780 3.0e-36 155.6 179 51.4
Lsat_1_v5_gn_4_103101 Lactuca sativa HOM05D000169 ORTHO05D004780 4.0e-36 155.2 176 50.0
Eucgr.J02955 Eucalyptus grandis HOM05D000169 ORTHO05D004780 6.8e-36 154.5 179 49.2
Cfa002101 Carpinus fangiana HOM05D000169 ORTHO05D004780 1.5e-35 153.3 179 48.6
Potri.001G185500 Populus trichocarpa HOM05D000169 ORTHO05D004780 2.0e-35 152.9 178 47.2
Glyma.07G019100 Glycine max HOM05D000169 ORTHO05D004780 2.6e-35 152.5 179 46.9
Lalb_Chr25g0280021 Lupinus albus HOM05D000169 ORTHO05D004780 2.6e-35 152.5 179 48.6
HanXRQChr16g0500801 Helianthus annuus HOM05D000169 ORTHO05D004780 3.4e-35 152.1 176 49.4
HanXRQChr16g0501111 Helianthus annuus HOM05D000169 ORTHO05D004780 3.4e-35 152.1 176 49.4
Phvul.010G148300 Phaseolus vulgaris HOM05D000169 ORTHO05D004780 3.4e-35 152.1 180 47.2
SGA_v2.0_scaffold5G02549 Striga asiatica HOM05D000169 ORTHO05D004780 4.4e-35 151.8 172 51.2
TWI75G0003 Tripterygium wilfordii HOM05D000169 ORTHO05D004780 5.7e-35 151.4 178 48.9
TAR624G0382 Trochodendron aralioides HOM05D000169 ORTHO05D004780 5.7e-35 151.4 179 48.0
TPR.G5245 Trifolium pratense HOM05D000169 ORTHO05D004780 7.5e-35 151.0 180 47.2
Oeu000461.2 Olea europaea HOM05D000169 ORTHO05D004780 9.8e-35 150.6 177 49.7
TWI12G1479 Tripterygium wilfordii HOM05D000169 ORTHO05D004780 9.8e-35 150.6 189 45.5
Glyma.08G204300 Glycine max HOM05D000169 ORTHO05D004780 1.7e-34 149.8 179 46.9
ECA232G3766 Erigeron canadensis HOM05D000169 ORTHO05D004780 2.2e-34 149.4 176 49.4
Manes.11G037400 Manihot esculenta HOM05D000169 ORTHO05D004780 2.2e-34 149.4 178 48.3
Medtr4g013210 Medicago truncatula HOM05D000169 ORTHO05D004780 2.2e-34 149.4 179 46.9
VMungo0331G1448 Vigna mungo HOM05D000169 ORTHO05D004780 2.9e-34 149.1 179 48.0
CANSAT56G0566 Cannabis sativa HOM05D000169 ORTHO05D004780 3.7e-34 148.7 179 46.9
CiPaw.02G148300 Carya illinoinensis HOM05D000169 ORTHO05D004780 3.7e-34 148.7 179 48.0
FAN05G1415 Fragaria x ananassa HOM05D000169 ORTHO05D004780 4.9e-34 148.3 179 48.0
Sc15g0002130 Simmondsia chinensis HOM05D000169 ORTHO05D004780 4.9e-34 148.3 179 46.9
Atru.chr1.3409_Atru.chr1.3410 Acer truncatum HOM05D000169 ORTHO05D004780 6.4e-34 147.9 178 47.8
Aqoxy7G01575 Aquilegia oxysepala HOM05D000169 ORTHO05D004780 6.4e-34 147.9 179 45.8
FvH4_6g31860 Fragaria vesca HOM05D000169 ORTHO05D004780 6.4e-34 147.9 179 48.0
FAN14G0873 Fragaria x ananassa HOM05D000169 ORTHO05D004780 6.4e-34 147.9 179 48.0
RcHm_v2.0_Chr2g0139181 Rosa chinensis HOM05D000169 ORTHO05D004780 8.3e-34 147.5 179 48.0
Nn2g11670 Nelumbo nucifera HOM05D000169 ORTHO05D004780 1.1e-33 147.1 179 47.5
Thecc.06G093200 Theobroma cacao HOM05D000169 ORTHO05D004780 1.1e-33 147.1 178 50.0
CiPaw.01G235100 Carya illinoinensis HOM05D000169 ORTHO05D004780 3.2e-33 145.6 179 46.4
Sabra01G0154600 Salix brachista HOM05D000169 ORTHO05D004780 3.2e-33 145.6 178 46.1
DCAR_026335 Daucus carota HOM05D000169 ORTHO05D004780 4.1e-33 145.2 179 45.8
Medtr4g011790 Medicago truncatula HOM05D000169 ORTHO05D004780 4.1e-33 145.2 179 46.9
TPR.G27504 Trifolium pratense HOM05D000169 ORTHO05D004780 5.4e-33 144.8 190 45.3
COL.COLO4_30443 Corchorus olitorius HOM05D000169 ORTHO05D004780 7.0e-33 144.4 178 50.6
Gohir.A10G081900 Gossypium hirsutum HOM05D000169 ORTHO05D004780 7.0e-33 144.4 178 49.4
Lj3g0027736 Lotus japonicus HOM05D000169 ORTHO05D004780 7.0e-33 144.4 179 45.3
arahy.Tifrunner.gnm1.ann1.5X7XAP Arachis hypogaea HOM05D000169 ORTHO05D004780 9.2e-33 144.1 188 43.6
Gohir.D10G069600 Gossypium hirsutum HOM05D000169 ORTHO05D004780 9.2e-33 144.1 178 48.9
Gorai.011G073700 Gossypium raimondii HOM05D000169 ORTHO05D004780 9.2e-33 144.1 178 48.9
MBI01_g30862_MAGBIO Magnolia biondii HOM05D000169 ORTHO05D004780 1.2e-32 143.7 174 48.3
Aa31LG8G3300 Aethionema arabicum HOM05D000169 ORTHO05D004780 1.6e-32 143.3 176 46.0
TPR.G38605 Trifolium pratense HOM05D000169 ORTHO05D004780 2.0e-32 142.9 190 44.2
CDE05G2910 Ceratophyllum demersum HOM05D000169 ORTHO05D004780 2.7e-32 142.5 179 48.0
Sp3g14530 Schrenkiella parvula HOM05D000169 ORTHO05D004780 4.6e-32 141.7 176 46.0
AL3G28850 Arabidopsis lyrata HOM05D000169 ORTHO05D004780 5.9e-32 141.4 176 45.5
C05p50330 Brassica napus HOM05D000169 ORTHO05D004780 7.8e-32 141.0 176 46.0
BolC5t33782H Brassica oleracea HOM05D000169 ORTHO05D004780 7.8e-32 141.0 176 45.5
Duzib160G0343 Durio zibethinus HOM05D000169 ORTHO05D004780 7.8e-32 141.0 178 47.2
A01p37930 Brassica napus HOM05D000169 ORTHO05D004780 1.0e-31 140.6 176 45.5
Thhalv10020466m.g Eutrema salsugineum HOM05D000169 ORTHO05D004780 1.0e-31 140.6 176 46.0
A05p33330 Brassica napus HOM05D000169 ORTHO05D004780 1.3e-31 140.2 176 44.9
BraA05t22158Z Brassica rapa HOM05D000169 ORTHO05D004780 1.3e-31 140.2 176 44.9
CARHR091330 Cardamine hirsuta HOM05D000169 ORTHO05D004780 1.3e-31 140.2 176 44.3
BraA01t03853Z Brassica rapa HOM05D000169 ORTHO05D004780 1.7e-31 139.8 176 45.5
BolC1t04779H Brassica oleracea HOM05D000169 ORTHO05D004780 2.3e-31 139.4 176 45.5
Ca_20416_v3 Cicer arietinum L. HOM05D000169 ORTHO05D004780 2.3e-31 139.4 179 44.1
Carub.0003s1591 Capsella rubella HOM05D000169 ORTHO05D004780 3.0e-31 139.0 176 44.9
THA.LOC104817978 Tarenaya hassleriana HOM05D000169 ORTHO05D004780 5.0e-31 138.3 178 46.1
AT3G16170 Arabidopsis thaliana HOM05D000169 ORTHO05D004780 6.6e-31 137.9 176 44.3
PSO566G0043 Papaver somniferum HOM05D000169 ORTHO05D004780 1.1e-30 137.1 179 44.7
ClCG10G006410 Citrullus lanatus HOM05D000169 ORTHO05D004780 3.3e-30 135.6 179 45.3
Ciclev10025185m.g Citrus clementina HOM05D000169 ORTHO05D004780 3.3e-30 135.6 179 48.0
ATR0315G134 Amborella trichopoda HOM05D000169 ORTHO05D004780 4.3e-30 135.2 179 43.6
Psat7g253800 Pisum sativum HOM05D000169 ORTHO05D004780 5.6e-30 134.8 179 45.3
HPP92_024579 Vanilla planifolia HOM05D000169 ORTHO05D004780 3.6e-29 132.1 177 44.1
MELO3C016565.2 Cucumis melo HOM05D000169 ORTHO05D004780 4.7e-29 131.7 179 43.6
Zm00001eb152410 Zea mays HOM05D000169 ORTHO05D004780 1.0e-28 130.6 178 42.1
Sed0000326 Sechium edule HOM05D000169 ORTHO05D004780 2.3e-28 129.4 179 44.7
CsaV3_3G005880 Cucumis sativus L. HOM05D000169 ORTHO05D004780 4.0e-28 128.6 180 43.9
Os01g0761300 Oryza sativa ssp. japonica HOM05D000169 ORTHO05D004780 5.2e-28 128.3 178 41.6
Psat7g253640 Pisum sativum HOM05D000169 ORTHO05D004780 6.8e-28 127.9 179 43.6
Hund06638 Selenicereus undatus HOM05D000169 ORTHO05D004780 2.6e-27 125.9 262 35.1
PSO782G1073 Papaver somniferum HOM05D000169 ORTHO05D004780 5.8e-27 124.8 179 43.6
HanXRQChr16g0501121 Helianthus annuus HOM05D000169 ORTHO05D004780 1.2e-24 117.1 160 45.6
SEGI_23005 Sequoiadendron giganteum HOM05D000169 ORTHO05D004780 1.6e-24 116.7 179 39.7
C01p48140 Brassica napus HOM05D000169 ORTHO05D004780 4.6e-24 115.2 100 58.0
Cpa.g.sc324.3 Carica papaya HOM05D000169 ORTHO05D004780 3.3e-22 109.0 94 59.6
Ca_20370_v3 Cicer arietinum L. HOM05D000169 ORTHO05D004780 1.2e-21 107.1 260 31.5
Psat3g156160 Pisum sativum HOM05D000169 ORTHO05D004780 2.8e-21 105.9 146 43.2
AUR62011680 Chenopodium quinoa HOM05D000169 ORTHO05D004780 6.2e-21 104.8 173 40.5
TAR636G0874 Trochodendron aralioides HOM05D000169 ORTHO05D004780 1.8e-20 103.2 95 55.8
AUR62016505 Chenopodium quinoa HOM05D000169 ORTHO05D004780 3.1e-20 102.4 162 42.0
BcaNung07322 Brassica carinata HOM05D000169 ORTHO05D004780 5.2e-20 101.7 156 37.8
Mapoly0036s0029 Marchantia polymorpha HOM05D000169 ORTHO05D004780 4.4e-19 98.6 176 34.1
Pp3c19_10110 Physcomitrium patens HOM05D000169 ORTHO05D004780 4.4e-19 98.6 176 35.8
Psat2g015720 Pisum sativum HOM05D000169 ORTHO05D004780 9.8e-19 97.4 124 44.4
Mapoly0003s0295 Marchantia polymorpha HOM05D000169 ORTHO05D004780 6.4e-18 94.7 176 35.8
Pp3c1_9430 Physcomitrium patens HOM05D000169 ORTHO05D004780 1.2e-16 90.5 176 34.7
SEGI_35837 Sequoiadendron giganteum HOM05D000169 ORTHO05D004780 6.0e-16 88.2 115 40.9
SMO203G0257 Selaginella moellendorffii HOM05D000169 ORTHO05D004780 1.0e-15 87.4 173 32.9
Cpa.g.sc379.1 Carica papaya HOM05D000169 ORTHO05D004780 5.1e-15 85.1 90 52.2
CBR_g3023 Chara braunii HOM05D000169 ORTHO05D004780 3.1e-12 75.9 198 29.3
ATR1200G001 Amborella trichopoda HOM05D000169 ORTHO05D004780 2.2e-10 69.7 46 65.2
MCO15G682 Micromonas commoda HOM05D000169 ORTHO05D004780 3.2e-09 65.9 216 26.9
Cre13.g586000 Chlamydomonas reinhardtii HOM05D000169 ORTHO05D004780 7.8e-08 61.2 95 38.9
Actinidia32722 Actinidia chinensis HOM05D000169 ORTHO05D004780 6.6e-07 58.2 69 47.8
PRCOL_00000351 Prasinoderma coloniale HOM05D000169 ORTHO05D004780 5.6e-06 55.1 104 35.6
Psat5g199760 Pisum sativum HOM05D000518 ORTHO05D000737 7.3e-06 54.7 64 46.9


User provided reference genes

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