Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 8.1e-78 293.9 173 100.0
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 2.7e-57 225.7 172 83.1
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 1.3e-48 196.8 149 77.2
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 7.4e-47 191.0 149 76.5
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 3.7e-46 188.7 149 81.9
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 1.2e-44 183.7 151 74.8
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 4.5e-44 181.8 150 78.7
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 3.3e-31 139.0 151 55.6
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 4.8e-30 135.2 141 69.5
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 7.0e-29 131.3 158 54.4
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 1.2e-28 130.6 134 56.7
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 4.5e-28 128.6 147 53.7
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 1.7e-27 126.7 154 52.6
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 1.7e-27 126.7 154 52.6
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 2.2e-27 126.3 156 52.6
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 2.2e-27 126.3 153 52.3
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 3.8e-27 125.6 160 51.9
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 1.1e-26 124.0 156 50.0
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 1.9e-26 123.2 156 49.4
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 7.2e-26 121.3 159 52.8
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 2.7e-25 119.4 157 59.2
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 3.6e-25 119.0 156 50.6
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 3.6e-25 119.0 163 51.5
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 1.4e-24 117.1 155 60.6
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 4.0e-24 115.5 163 55.8
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 1.1e-23 114.0 153 55.6
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 2.0e-23 113.2 154 46.8
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 2.6e-23 112.8 163 56.4
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 2.6e-23 112.8 159 46.5
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 3.3e-23 112.5 165 58.8
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 4.4e-23 112.1 172 54.1
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 4.4e-23 112.1 164 48.2
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 5.7e-23 111.7 176 47.7
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 9.7e-23 110.9 160 58.1
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 1.3e-22 110.5 152 48.0
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 1.7e-22 110.2 131 50.4
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 2.8e-22 109.4 161 60.2
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 2.8e-22 109.4 155 45.8
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 3.7e-22 109.0 142 61.3
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 4.8e-22 108.6 152 50.0
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 6.3e-22 108.2 158 48.7
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 1.1e-21 107.5 160 45.6
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 1.4e-21 107.1 159 59.1
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 1.4e-21 107.1 161 59.6
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 1.8e-21 106.7 165 57.0
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 2.4e-21 106.3 138 47.8
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 3.1e-21 105.9 161 45.3
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 7.0e-21 104.8 154 57.1
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 7.0e-21 104.8 141 48.2
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 9.1e-21 104.4 91 60.4
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 1.2e-20 104.0 157 58.0
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 1.6e-20 103.6 165 57.6
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 2.6e-20 102.8 104 54.8
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 3.5e-20 102.4 168 53.6
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 3.5e-20 102.4 158 48.1
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 4.5e-20 102.1 145 49.0
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 5.9e-20 101.7 154 55.2
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 7.7e-20 101.3 145 59.3
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 7.7e-20 101.3 145 50.3
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 1.0e-19 100.9 161 58.4
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 1.3e-19 100.5 168 42.9
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 3.8e-19 99.0 146 58.9
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 6.5e-19 98.2 110 56.4
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.1e-18 97.4 143 52.4
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 1.1e-18 97.4 143 52.4
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.5e-18 97.1 152 49.3
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.9e-18 96.7 90 58.9
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 2.5e-18 96.3 153 54.9
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 4.2e-18 95.5 147 49.0
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 4.2e-18 95.5 169 40.8
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 7.2e-18 94.7 151 57.6
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 1.2e-17 94.0 168 41.1
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 2.7e-17 92.8 173 40.5
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 8.0e-17 91.3 180 43.3
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 1.4e-16 90.5 201 45.8
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.8e-16 90.1 153 53.6
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 8.8e-16 87.8 157 42.0
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 3.4e-15 85.9 188 48.4
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 5.7e-15 85.1 164 39.6
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 5.7e-15 85.1 147 40.8
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 9.8e-15 84.3 174 51.7
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 9.8e-15 84.3 140 40.7
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 1.3e-14 84.0 147 48.3
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.3e-14 84.0 132 43.9
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 1.7e-14 83.6 88 52.3
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 2.8e-14 82.8 149 37.6
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 2.8e-14 82.8 147 38.8
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 4.8e-14 82.0 137 41.6
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 6.3e-14 81.6 147 37.4
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 6.3e-14 81.6 147 38.1
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 8.3e-14 81.3 148 38.5
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 8.3e-14 81.3 150 43.3
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 1.1e-13 80.9 147 38.1
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 1.4e-13 80.5 146 42.5
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 1.4e-13 80.5 144 47.9
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 2.4e-13 79.7 91 48.4
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 3.1e-13 79.3 98 48.0
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 4.1e-13 79.0 130 50.8
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 5.4e-13 78.6 219 41.1
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 5.4e-13 78.6 144 47.2
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 7.0e-13 78.2 154 40.9
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 4.5e-12 75.5 129 40.3
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 2.2e-11 73.2 122 40.2
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 5.0e-11 72.0 130 37.7
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 1.1e-10 70.9 124 39.5
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 1.9e-10 70.1 110 41.8
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 1.9e-10 70.1 110 41.8
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 3.2e-10 69.3 94 42.6
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 3.2e-10 69.3 94 42.6
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 4.2e-10 68.9 109 43.1
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 1.2e-09 67.4 149 35.6
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 1.2e-09 67.4 84 48.8
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 3.6e-09 65.9 169 45.0
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 3.0e-08 62.8 57 59.6
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 9.8e-07 57.8 80 42.5


User provided reference genes

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