Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000413g0050 Nicotiana tabacum HOM05D004803 ORTHO05D005653 1.0e-35 152.9 78 100.0
Nitab4.5_0005014g0030 Nicotiana tabacum HOM05D004803 ORTHO05D005653 1.0e-35 152.9 78 100.0
Sopen07g005800 Solanum pennellii HOM05D004803 ORTHO05D005653 5.5e-34 147.1 78 94.9
Sopen07g005820 Solanum pennellii HOM05D004803 ORTHO05D005653 5.5e-34 147.1 78 94.9
CAN.G54.3 Capsicum annuum HOM05D004803 ORTHO05D005653 2.7e-33 144.8 78 93.6
Peaxi162Scf00320g00053 Petunia axillaris HOM05D004803 ORTHO05D005653 2.7e-33 144.8 79 94.9
Nitab4.5_0005411g0060 Nicotiana tabacum HOM05D004803 ORTHO05D005653 6.1e-33 143.7 78 91.0
PGSC0003DMG400021021 Solanum tuberosum HOM05D004803 ORTHO05D005653 6.1e-33 143.7 78 93.6
Nitab4.5_0004188g0060 Nicotiana tabacum HOM05D004803 ORTHO05D005653 1.4e-32 142.5 78 89.7
Nitab4.5_0010123g0030 Nicotiana tabacum HOM05D004803 ORTHO05D005653 5.7e-31 137.1 70 98.6
Solyc07g015970.3 Solanum lycopersicum HOM05D004803 ORTHO05D005653 1.3e-30 136.0 73 93.2
PGSC0003DMG402013687 Solanum tuberosum HOM05D004803 ORTHO05D005653 1.7e-27 125.6 79 82.3
Migut.B00847 Erythranthe guttata HOM05D004803 ORTHO05D005653 6.5e-27 123.6 79 79.7
Solyc05g047390.1 Solanum lycopersicum HOM05D004803 ORTHO05D005653 8.5e-27 123.2 79 81.0
Sopen05g027700 Solanum pennellii HOM05D004803 ORTHO05D005653 8.5e-27 123.2 79 81.0
SalBow5G1850 Salvia bowleyana HOM05D004803 ORTHO05D005653 4.2e-26 120.9 79 75.9
MD13G1234800 Malus domestica HOM05D004803 ORTHO05D005653 2.4e-21 105.1 78 69.2
CSS0040541 Camellia sinensis var. sinensis HOM05D004803 ORTHO05D005653 3.1e-21 104.8 78 70.5
Hma1.2p1_0284F.1_g113820 Hydrangea macrophylla HOM05D004803 ORTHO05D005653 4.1e-21 104.4 78 70.5
Lsat_1_v5_gn_7_59621 Lactuca sativa HOM05D004803 ORTHO05D005653 9.1e-21 103.2 78 67.9
Lsat_1_v5_gn_7_59641 Lactuca sativa HOM05D004803 ORTHO05D005653 9.1e-21 103.2 78 67.9
Prupe.1G065700 Prunus persica HOM05D004803 ORTHO05D005653 2.0e-20 102.1 78 64.1
Hma1.2p1_0418F.1_g149310 Hydrangea macrophylla HOM05D004803 ORTHO05D005653 2.7e-20 101.7 76 69.7
RcHm_v2.0_Chr4g0397981 Rosa chinensis HOM05D004803 ORTHO05D005653 5.9e-20 100.5 78 61.5
TAR636G2654 Trochodendron aralioides HOM05D004803 ORTHO05D005653 7.7e-20 100.1 78 66.7
Zm00001eb358730 Zea mays HOM05D004803 ORTHO05D005653 7.7e-20 100.1 80 66.2
vmacro20779 Vaccinium macrocarpon HOM05D004803 ORTHO05D005653 1.7e-19 99.0 77 68.8
CiPaw.15G155100 Carya illinoinensis HOM05D004803 ORTHO05D005653 2.9e-19 98.2 78 62.8
ClCG06G014040 Citrullus lanatus HOM05D004803 ORTHO05D005653 2.9e-19 98.2 78 64.1
MD16G1239600 Malus domestica HOM05D004803 ORTHO05D005653 2.9e-19 98.2 78 65.4
Cfa020735 Carpinus fangiana HOM05D004803 ORTHO05D005653 5.0e-19 97.4 78 61.5
Sed0007901 Sechium edule HOM05D004803 ORTHO05D005653 5.0e-19 97.4 78 64.1
Atru.chr7.977 Acer truncatum HOM05D004803 ORTHO05D005653 6.6e-19 97.1 78 65.4
Phvul.002G303100 Phaseolus vulgaris HOM05D004803 ORTHO05D005653 6.6e-19 97.1 78 64.1
QL11p009265 Quercus lobata HOM05D004803 ORTHO05D005653 6.6e-19 97.1 77 61.0
FAN17G0329 Fragaria x ananassa HOM05D004803 ORTHO05D005653 8.6e-19 96.7 78 62.8
Glyma.05G221400 Glycine max HOM05D004803 ORTHO05D005653 1.1e-18 96.3 78 62.8
Glyma.08G027900 Glycine max HOM05D004803 ORTHO05D005653 1.5e-18 95.9 78 61.5
Lalb_Chr16g0390871 Lupinus albus HOM05D004803 ORTHO05D005653 1.5e-18 95.9 78 62.8
FvH4_4g06260 Fragaria vesca HOM05D004803 ORTHO05D005653 1.9e-18 95.5 78 60.3
FAN12G1038 Fragaria x ananassa HOM05D004803 ORTHO05D005653 1.9e-18 95.5 78 60.3
FAN22G0315 Fragaria x ananassa HOM05D004803 ORTHO05D005653 2.5e-18 95.1 78 60.3
HanXRQChr14g0437441 Helianthus annuus HOM05D004803 ORTHO05D005653 2.5e-18 95.1 79 62.0
FAN07G1450 Fragaria x ananassa HOM05D004803 ORTHO05D005653 3.3e-18 94.7 78 60.3
Thecc.07G084900 Theobroma cacao HOM05D004803 ORTHO05D005653 4.2e-18 94.4 78 60.3
Cpa.g.sc116.72 Carica papaya HOM05D004803 ORTHO05D005653 5.5e-18 94.0 78 64.1
COL.COLO4_24021 Corchorus olitorius HOM05D004803 ORTHO05D005653 7.2e-18 93.6 78 62.8
ECA240G2554 Erigeron canadensis HOM05D004803 ORTHO05D005653 7.2e-18 93.6 78 60.3
TWI14G1226 Tripterygium wilfordii HOM05D004803 ORTHO05D005653 7.2e-18 93.6 78 62.8
Duzib106G0817 Durio zibethinus HOM05D004803 ORTHO05D005653 9.5e-18 93.2 78 61.5
MELO3C019213.2 Cucumis melo HOM05D004803 ORTHO05D005653 1.2e-17 92.8 78 62.8
Potri.018G146602 Populus trichocarpa HOM05D004803 ORTHO05D005653 1.2e-17 92.8 77 61.0
Gohir.D13G117900 Gossypium hirsutum HOM05D004803 ORTHO05D005653 1.6e-17 92.4 78 61.5
Gorai.013G132400 Gossypium raimondii HOM05D004803 ORTHO05D005653 1.6e-17 92.4 78 61.5
Lsat_1_v5_gn_7_59661 Lactuca sativa HOM05D004803 ORTHO05D005653 1.6e-17 92.4 78 60.3
CsaV3_2G035410 Cucumis sativus L. HOM05D004803 ORTHO05D005653 2.1e-17 92.0 77 61.0
Os01g0626300 Oryza sativa ssp. japonica HOM05D004803 ORTHO05D005653 2.1e-17 92.0 81 58.0
unitig_899.g15187 Utricularia gibba HOM05D004803 ORTHO05D005653 2.1e-17 92.0 80 62.5
Ciclev10003057m.g Citrus clementina HOM05D004803 ORTHO05D005653 2.8e-17 91.7 78 62.8
TPR.G25472 Trifolium pratense HOM05D004803 ORTHO05D005653 2.8e-17 91.7 78 61.5
Ciclev10023194m.g Citrus clementina HOM05D004803 ORTHO05D005653 3.6e-17 91.3 78 60.3
Gohir.A13G115000 Gossypium hirsutum HOM05D004803 ORTHO05D005653 3.6e-17 91.3 78 60.3
MBI13_g31565_MAGBIO Magnolia biondii HOM05D004803 ORTHO05D005653 4.7e-17 90.9 71 64.8
Medtr2g067370 Medicago truncatula HOM05D004803 ORTHO05D005653 4.7e-17 90.9 78 61.5
TWI39G0014 Tripterygium wilfordii HOM05D004803 ORTHO05D005653 6.1e-17 90.5 78 62.8
Ca_17414_v3 Cicer arietinum L. HOM05D004803 ORTHO05D005653 1.0e-16 89.7 78 60.3
Manes.13G122700 Manihot esculenta HOM05D004803 ORTHO05D005653 1.0e-16 89.7 78 57.7
Potri.006G077500 Populus trichocarpa HOM05D004803 ORTHO05D005653 1.0e-16 89.7 77 58.4
Manes.12G104200 Manihot esculenta HOM05D004803 ORTHO05D005653 1.4e-16 89.4 78 59.0
Potri.018G145502 Populus trichocarpa HOM05D004803 ORTHO05D005653 1.4e-16 89.4 77 58.4
HPP92_006365 Vanilla planifolia HOM05D004803 ORTHO05D005653 1.4e-16 89.4 78 60.3
CANSAT80G0011 Cannabis sativa HOM05D004803 ORTHO05D005653 1.8e-16 89.0 77 58.4
Duzib128G1472 Durio zibethinus HOM05D004803 ORTHO05D005653 1.8e-16 89.0 78 59.0
MD15G1094200 Malus domestica HOM05D004803 ORTHO05D005653 1.8e-16 89.0 78 59.0
Medtr3g055500 Medicago truncatula HOM05D004803 ORTHO05D005653 1.8e-16 89.0 76 63.2
Medtr3g462060 Medicago truncatula HOM05D004803 ORTHO05D005653 1.8e-16 89.0 78 62.8
Cc00_g00470 Coffea canephora HOM05D004803 ORTHO05D005653 3.0e-16 88.2 82 57.3
Aqoxy7G02691 Aquilegia oxysepala HOM05D004803 ORTHO05D005653 4.0e-16 87.8 77 62.3
Carub.0007s3380 Capsella rubella HOM05D004803 ORTHO05D005653 6.8e-16 87.0 78 61.5
DCAR_019792 Daucus carota HOM05D004803 ORTHO05D005653 6.8e-16 87.0 80 55.0
Thhalv10028124m.g Eutrema salsugineum HOM05D004803 ORTHO05D005653 1.5e-15 85.9 78 61.5
AL7G47670 Arabidopsis lyrata HOM05D004803 ORTHO05D005653 3.4e-15 84.7 78 60.3
PGR083G2338 Punica granatum HOM05D004803 ORTHO05D005653 3.4e-15 84.7 70 62.9
MBI11_g11974_MAGBIO Magnolia biondii HOM05D004803 ORTHO05D005653 4.4e-15 84.3 47 78.7
Psat7g021680 Pisum sativum HOM05D004803 ORTHO05D005653 5.7e-15 84.0 78 52.6
AT5G41685 Arabidopsis thaliana HOM05D004803 ORTHO05D005653 9.8e-15 83.2 83 57.8
Os01g0732000 Oryza sativa ssp. japonica HOM05D004803 ORTHO05D005653 9.8e-15 83.2 70 57.1
BcaC08g44541 Brassica carinata HOM05D004803 ORTHO05D005653 1.3e-14 82.8 78 55.1
BcaB06g27645 Brassica carinata HOM05D004803 ORTHO05D005653 1.7e-14 82.4 72 56.9
PSO063G0965 Papaver somniferum HOM05D004803 ORTHO05D005653 1.7e-14 82.4 78 55.1
Pp3c14_20040 Physcomitrium patens HOM05D004803 ORTHO05D005653 1.7e-14 82.4 47 76.6
Sp7g21690 Schrenkiella parvula HOM05D004803 ORTHO05D005653 1.7e-14 82.4 69 53.6
Carub.0002s0057 Capsella rubella HOM05D004803 ORTHO05D005653 2.2e-14 82.0 80 55.0
Aa31LG6G6980 Aethionema arabicum HOM05D004803 ORTHO05D005653 2.9e-14 81.6 77 53.2
Sp7g00380 Schrenkiella parvula HOM05D004803 ORTHO05D005653 2.9e-14 81.6 47 76.6
Pp3c17_18760 Physcomitrium patens HOM05D004803 ORTHO05D005653 3.7e-14 81.3 47 74.5
BcaB02g07882 Brassica carinata HOM05D004803 ORTHO05D005653 4.9e-14 80.9 78 52.6
Nn8g40644 Nelumbo nucifera HOM05D004803 ORTHO05D005653 4.9e-14 80.9 76 56.6
CARHR272970 Cardamine hirsuta HOM05D004803 ORTHO05D005653 8.3e-14 80.1 78 56.4
Aa31LG9G390 Aethionema arabicum HOM05D004803 ORTHO05D005653 1.1e-13 79.7 74 56.8
CARHR231140 Cardamine hirsuta HOM05D004803 ORTHO05D005653 1.8e-13 79.0 72 48.6
Nn8g41089 Nelumbo nucifera HOM05D004803 ORTHO05D005653 1.8e-13 79.0 66 63.6
Aa31LG2G1260 Aethionema arabicum HOM05D004803 ORTHO05D005653 3.2e-13 78.2 76 53.9
BcaB07g31446 Brassica carinata HOM05D004803 ORTHO05D005653 3.2e-13 78.2 47 72.3
A04p14790 Brassica napus HOM05D004803 ORTHO05D005653 3.2e-13 78.2 72 55.6
A04p14850 Brassica napus HOM05D004803 ORTHO05D005653 3.2e-13 78.2 72 55.6
BraA04t17117Z Brassica rapa HOM05D004803 ORTHO05D005653 3.2e-13 78.2 72 55.6
AT1G64220 Arabidopsis thaliana HOM05D004803 ORTHO05D005653 5.4e-13 77.4 78 51.3
BcaC02g08933 Brassica carinata HOM05D004803 ORTHO05D005653 5.4e-13 77.4 72 55.6
C04p48720 Brassica napus HOM05D004803 ORTHO05D005653 5.4e-13 77.4 72 55.6
C04p48770 Brassica napus HOM05D004803 ORTHO05D005653 5.4e-13 77.4 72 55.6
C04p48830 Brassica napus HOM05D004803 ORTHO05D005653 5.4e-13 77.4 72 55.6
BolC4t26463H Brassica oleracea HOM05D004803 ORTHO05D005653 5.4e-13 77.4 72 55.6
BolC4t26468H Brassica oleracea HOM05D004803 ORTHO05D005653 5.4e-13 77.4 47 72.3
Medtr3g061970 Medicago truncatula HOM05D004803 ORTHO05D005653 5.4e-13 77.4 77 58.4
A04p18870 Brassica napus HOM05D004803 ORTHO05D005653 7.0e-13 77.0 72 55.6
BraA04t17123Z Brassica rapa HOM05D004803 ORTHO05D005653 7.0e-13 77.0 72 55.6
Eucgr.H00014 Eucalyptus grandis HOM05D004803 ORTHO05D005653 7.0e-13 77.0 72 58.3
Ah.08g217890 Amaranthus hybridus HOM05D004803 ORTHO05D005653 9.2e-13 76.6 70 54.3
Thhalv10023788m.g Eutrema salsugineum HOM05D004803 ORTHO05D005653 9.2e-13 76.6 44 77.3
AUR62025705 Chenopodium quinoa HOM05D004803 ORTHO05D005653 1.2e-12 76.3 67 59.7
THA.LOC104817698 Tarenaya hassleriana HOM05D004803 ORTHO05D005653 1.2e-12 76.3 78 52.6
MD12G1085900 Malus domestica HOM05D004803 ORTHO05D005653 1.6e-12 75.9 68 58.8
Sc12g0011260 Simmondsia chinensis HOM05D004803 ORTHO05D005653 1.6e-12 75.9 75 48.0
THA.LOC104823604 Tarenaya hassleriana HOM05D004803 ORTHO05D005653 2.0e-12 75.5 78 53.8
BcaB07g31518 Brassica carinata HOM05D004803 ORTHO05D005653 2.7e-12 75.1 47 70.2
AUR62001322 Chenopodium quinoa HOM05D004803 ORTHO05D005653 2.7e-12 75.1 67 59.7
AL2G10780 Arabidopsis lyrata HOM05D004803 ORTHO05D005653 3.5e-12 74.7 47 72.3
Os05g0583400 Oryza sativa ssp. japonica HOM05D004803 ORTHO05D005653 4.6e-12 74.3 45 71.1
CBR_g29720 Chara braunii HOM05D004803 ORTHO05D005653 1.0e-11 73.2 47 68.1
CARHR046710 Cardamine hirsuta HOM05D004803 ORTHO05D005653 1.7e-11 72.4 78 51.3
MD06G1130200 Malus domestica HOM05D004803 ORTHO05D005653 1.7e-11 72.4 68 57.4
Mapoly0024s0138 Marchantia polymorpha HOM05D004803 ORTHO05D005653 1.7e-11 72.4 49 69.4
SMO167G0035 Selaginella moellendorffii HOM05D004803 ORTHO05D005653 3.9e-11 71.2 61 55.7
BcaC04g22640 Brassica carinata HOM05D004803 ORTHO05D005653 8.6e-11 70.1 76 46.1
CBR_g29719 Chara braunii HOM05D004803 ORTHO05D005653 8.6e-11 70.1 45 64.4
C09p18010 Brassica napus HOM05D004803 ORTHO05D005653 3.3e-10 68.2 44 68.2
BolC9t54609H Brassica oleracea HOM05D004803 ORTHO05D005653 3.3e-10 68.2 76 46.1
BraA09t37134Z Brassica rapa HOM05D004803 ORTHO05D005653 3.3e-10 68.2 44 68.2
BcaC04g22540 Brassica carinata HOM05D004803 ORTHO05D005653 4.3e-10 67.8 44 65.9
BcaC04g22545 Brassica carinata HOM05D004803 ORTHO05D005653 4.3e-10 67.8 44 65.9
BcaC04g22642 Brassica carinata HOM05D004803 ORTHO05D005653 4.3e-10 67.8 44 65.9
BcaC04g22643 Brassica carinata HOM05D004803 ORTHO05D005653 4.3e-10 67.8 44 65.9
BolC9t54698H Brassica oleracea HOM05D004803 ORTHO05D005653 4.3e-10 67.8 44 65.9
Sed0005262 Sechium edule HOM05D004803 ORTHO05D005653 7.3e-10 67.0 61 54.1
A09p14890 Brassica napus HOM05D004803 ORTHO05D005653 9.5e-10 66.6 78 48.7
Atru.chr9.1510 Acer truncatum HOM05D004803 ORTHO05D005653 2.1e-09 65.5 59 59.3
Lalb_Chr09g0331931 Lupinus albus HOM05D004803 ORTHO05D005653 2.1e-09 65.5 60 51.7
C04p48860 Brassica napus HOM05D004803 ORTHO05D005653 4.7e-09 64.3 69 50.7
Nn8g40643 Nelumbo nucifera HOM05D004803 ORTHO05D005653 6.2e-09 63.9 34 88.2
Lj4g0006469 Lotus japonicus HOM05D004803 ORTHO05D005653 2.6e-07 58.5 59 50.8
MBI16_g37211_MAGBIO Magnolia biondii HOM05D004803 ORTHO05D005653 4.9e-06 54.3 44 65.9


User provided reference genes

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