Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005003g0070 Nicotiana tabacum HOM05D001920 ORTHO05D004895 6.6e-99 364.0 180 100.0
Nitab4.5_0009641g0080 Nicotiana tabacum HOM05D001920 ORTHO05D004895 6.0e-76 287.7 159 87.4
PGSC0003DMG400002574 Solanum tuberosum HOM05D001920 ORTHO05D004895 4.6e-60 235.0 189 65.1
CAN.G862.17 Capsicum annuum HOM05D001920 ORTHO05D004895 5.1e-59 231.5 189 64.6
Sopen03g040690 Solanum pennellii HOM05D001920 ORTHO05D004895 4.4e-58 228.4 189 64.0
Solyc03g121870.3 Solanum lycopersicum HOM05D001920 ORTHO05D004895 3.7e-57 225.3 187 64.2
Peaxi162Scf00038g01742 Petunia axillaris HOM05D001920 ORTHO05D004895 3.3e-42 175.6 159 60.4
Cc04_g01640 Coffea canephora HOM05D001920 ORTHO05D004895 6.8e-35 151.4 150 51.3
Lj7C259G6 Lonicera japonica HOM05D001920 ORTHO05D004895 2.8e-33 146.0 118 55.1
Dinv04004 Davidia involucrata HOM05D001920 ORTHO05D004895 1.4e-32 143.7 151 48.3
Oeu002490.2 Olea europaea HOM05D001920 ORTHO05D004895 3.1e-32 142.5 151 47.7
Nitab4.5_0003458g0040 Nicotiana tabacum HOM05D001920 ORTHO05D004895 1.6e-31 140.2 123 56.1
SalBow6G2588 Salvia bowleyana HOM05D001920 ORTHO05D004895 3.5e-31 139.0 174 41.4
TAR383G0380 Trochodendron aralioides HOM05D001920 ORTHO05D004895 7.7e-31 137.9 160 48.8
MBI15_g23252_MAGBIO Magnolia biondii HOM05D001920 ORTHO05D004895 2.3e-30 136.3 131 50.4
TWI79G1757 Tripterygium wilfordii HOM05D001920 ORTHO05D004895 2.3e-30 136.3 150 46.7
Migut.I01051 Erythranthe guttata HOM05D001920 ORTHO05D004895 2.9e-30 136.0 186 39.8
Actinidia26040 Actinidia chinensis HOM05D001920 ORTHO05D004895 5.0e-30 135.2 145 46.2
Aqoxy6G01567 Aquilegia oxysepala HOM05D001920 ORTHO05D004895 5.0e-30 135.2 157 43.9
PSO210G1339 Papaver somniferum HOM05D001920 ORTHO05D004895 6.5e-30 134.8 141 46.1
MSTRG.11648 Avicennia marina HOM05D001920 ORTHO05D004895 8.6e-30 134.4 140 46.4
COL.COLO4_21091 Corchorus olitorius HOM05D001920 ORTHO05D004895 1.5e-29 133.7 131 48.9
unitig_748.g8245 Utricularia gibba HOM05D001920 ORTHO05D004895 1.5e-29 133.7 147 45.6
PGR044G1960 Punica granatum HOM05D001920 ORTHO05D004895 1.9e-29 133.3 131 49.6
Gohir.D04G008700 Gossypium hirsutum HOM05D001920 ORTHO05D004895 2.5e-29 132.9 145 47.6
Gorai.012G010500 Gossypium raimondii HOM05D001920 ORTHO05D004895 2.5e-29 132.9 145 47.6
Solyc08g062770.3 Solanum lycopersicum HOM05D001920 ORTHO05D004895 3.2e-29 132.5 140 48.6
Sopen08g018250 Solanum pennellii HOM05D001920 ORTHO05D004895 3.2e-29 132.5 140 48.6
SGA_v2.0_scaffold71G23819 Striga asiatica HOM05D001920 ORTHO05D004895 3.2e-29 132.5 150 43.3
PSO210G7567 Papaver somniferum HOM05D001920 ORTHO05D004895 4.2e-29 132.1 141 45.4
GSVIVG01016814001 Vitis vinifera HOM05D001920 ORTHO05D004895 5.5e-29 131.7 173 45.1
MSTRG.10969 Avicennia marina HOM05D001920 ORTHO05D004895 9.5e-29 131.0 156 42.3
Nn8g38776 Nelumbo nucifera HOM05D001920 ORTHO05D004895 9.5e-29 131.0 140 45.7
arahy.Tifrunner.gnm1.ann1.ZYB4F6 Arachis hypogaea HOM05D001920 ORTHO05D004895 1.2e-28 130.6 131 47.3
Gohir.A05G406900 Gossypium hirsutum HOM05D001920 ORTHO05D004895 1.2e-28 130.6 145 46.2
Thecc.09G057600 Theobroma cacao HOM05D001920 ORTHO05D004895 1.2e-28 130.6 140 45.7
GSVIVG01012560001 Vitis vinifera HOM05D001920 ORTHO05D004895 1.6e-28 130.2 140 44.3
GSVIVG01012573001 Vitis vinifera HOM05D001920 ORTHO05D004895 1.6e-28 130.2 140 44.3
Atru.chr7.1933 Acer truncatum HOM05D001920 ORTHO05D004895 2.1e-28 129.8 132 47.7
FvH4_2g31511 Fragaria vesca HOM05D001920 ORTHO05D004895 2.1e-28 129.8 157 42.0
Lsat_1_v5_gn_4_71781 Lactuca sativa HOM05D001920 ORTHO05D004895 2.1e-28 129.8 140 45.0
Hma1.2p1_0496F.1_g166080 Hydrangea macrophylla HOM05D001920 ORTHO05D004895 2.8e-28 129.4 141 47.5
Potri.006G225600 Populus trichocarpa HOM05D001920 ORTHO05D004895 2.8e-28 129.4 140 46.4
Thecc.06G115800 Theobroma cacao HOM05D001920 ORTHO05D004895 2.8e-28 129.4 145 44.8
Actinidia25711 Actinidia chinensis HOM05D001920 ORTHO05D004895 3.6e-28 129.0 140 46.4
arahy.Tifrunner.gnm1.ann1.Z1X8E4 Arachis hypogaea HOM05D001920 ORTHO05D004895 3.6e-28 129.0 123 49.6
MBI11_g07545_MAGBIO Magnolia biondii HOM05D001920 ORTHO05D004895 3.6e-28 129.0 163 42.3
PSO832G0401 Papaver somniferum HOM05D001920 ORTHO05D004895 3.6e-28 129.0 144 45.1
Dinv30362 Davidia involucrata HOM05D001920 ORTHO05D004895 4.7e-28 128.6 96 61.5
PGR119G1597 Punica granatum HOM05D001920 ORTHO05D004895 4.7e-28 128.6 142 47.2
ATR0716G012 Amborella trichopoda HOM05D001920 ORTHO05D004895 6.1e-28 128.3 155 43.2
RcHm_v2.0_Chr6g0311271 Rosa chinensis HOM05D001920 ORTHO05D004895 6.1e-28 128.3 140 44.3
CSS0015201 Camellia sinensis var. sinensis HOM05D001920 ORTHO05D004895 8.0e-28 127.9 156 42.9
CsaV3_4G035790 Cucumis sativus L. HOM05D001920 ORTHO05D004895 1.0e-27 127.5 140 43.6
Nitab4.5_0003730g0040 Nicotiana tabacum HOM05D001920 ORTHO05D004895 1.0e-27 127.5 94 62.8
SalBow4G0898 Salvia bowleyana HOM05D001920 ORTHO05D004895 1.0e-27 127.5 96 60.4
Sc23g0005760 Simmondsia chinensis HOM05D001920 ORTHO05D004895 1.0e-27 127.5 140 47.9
FAN15G2558 Fragaria x ananassa HOM05D001920 ORTHO05D005408 1.4e-27 127.1 157 41.4
Peaxi162Scf00070g00315 Petunia axillaris HOM05D001920 ORTHO05D004895 1.4e-27 127.1 175 41.7
FAN27G2437 Fragaria x ananassa HOM05D001920 ORTHO05D005408 1.8e-27 126.7 157 41.4
Hma1.2p1_0196F.1_g084790 Hydrangea macrophylla HOM05D001920 ORTHO05D004895 1.8e-27 126.7 140 45.7
Lj7A259G18 Lonicera japonica HOM05D001920 ORTHO05D004895 1.8e-27 126.7 171 39.2
Lalb_Chr14g0366411 Lupinus albus HOM05D001920 ORTHO05D004895 1.8e-27 126.7 184 38.0
Sabra06G0174400 Salix brachista HOM05D001920 ORTHO05D005408 1.8e-27 126.7 140 45.7
CANSAT25G1922 Cannabis sativa HOM05D001920 ORTHO05D004895 2.3e-27 126.3 156 41.7
Duzib168G0495 Durio zibethinus HOM05D001920 ORTHO05D004895 3.0e-27 125.9 140 43.6
Migut.D00409 Erythranthe guttata HOM05D001920 ORTHO05D004895 3.0e-27 125.9 140 45.0
FAN20G0594 Fragaria x ananassa HOM05D001920 ORTHO05D005408 3.0e-27 125.9 157 40.8
Hund03323 Selenicereus undatus HOM05D001920 ORTHO05D004895 3.0e-27 125.9 140 45.0
TWI32G0956 Tripterygium wilfordii HOM05D001920 ORTHO05D004895 3.0e-27 125.9 140 45.7
Dinv12436 Davidia involucrata HOM05D001920 ORTHO05D004895 4.0e-27 125.6 140 44.3
Manes.16G082500 Manihot esculenta HOM05D001920 ORTHO05D004895 5.2e-27 125.2 140 44.3
THA.LOC104819893 Tarenaya hassleriana HOM05D001920 ORTHO05D004895 5.2e-27 125.2 140 45.0
TAR626G1466 Trochodendron aralioides HOM05D001920 ORTHO05D004895 5.2e-27 125.2 140 45.0
Ah.10g034110 Amaranthus hybridus HOM05D001920 ORTHO05D004895 6.8e-27 124.8 140 45.7
Cfa017979 Carpinus fangiana HOM05D001920 ORTHO05D005408 6.8e-27 124.8 151 41.7
Cc08_g10920 Coffea canephora HOM05D001920 ORTHO05D004895 6.8e-27 124.8 140 45.0
ECA234G4475 Erigeron canadensis HOM05D001920 ORTHO05D004895 8.8e-27 124.4 140 44.3
Zm00001eb003510 Zea mays HOM05D001920 ORTHO05D004895 8.8e-27 124.4 142 42.3
EL10Ac2g03824 Beta vulgaris HOM05D001920 ORTHO05D004895 1.2e-26 124.0 140 45.0
Gorai.010G098400 Gossypium raimondii HOM05D001920 ORTHO05D004895 1.2e-26 124.0 140 44.3
Lj5g0021243 Lotus japonicus HOM05D001920 ORTHO05D004895 1.2e-26 124.0 139 43.2
VMungo0647G0099 Vigna mungo HOM05D001920 ORTHO05D004895 1.2e-26 124.0 140 42.1
AL4G18730 Arabidopsis lyrata HOM05D001920 ORTHO05D004895 2.0e-26 123.2 140 45.7
Ca_13119_v3 Cicer arietinum L. HOM05D001920 ORTHO05D004895 2.0e-26 123.2 183 38.3
Glyma.14G097800 Glycine max HOM05D001920 ORTHO05D004895 2.0e-26 123.2 140 44.3
HanXRQChr10g0309731 Helianthus annuus HOM05D001920 ORTHO05D004895 2.0e-26 123.2 122 51.6
QL02p000696 Quercus lobata HOM05D001920 ORTHO05D004895 2.0e-26 123.2 151 41.7
Sp4g06300 Schrenkiella parvula HOM05D001920 ORTHO05D004895 2.0e-26 123.2 140 45.0
TWI34G1198 Tripterygium wilfordii HOM05D001920 ORTHO05D004895 2.0e-26 123.2 140 43.6
AUR62009117 Chenopodium quinoa HOM05D001920 ORTHO05D004895 2.6e-26 122.9 140 45.7
Gohir.A06G085800 Gossypium hirsutum HOM05D001920 ORTHO05D004895 2.6e-26 122.9 140 44.3
Aqoxy7G04000 Aquilegia oxysepala HOM05D001920 ORTHO05D004895 3.4e-26 122.5 111 52.3
Carub.0001s3487 Capsella rubella HOM05D001920 ORTHO05D004895 3.4e-26 122.5 140 45.0
Cpa.g.sc7.156 Carica papaya HOM05D001920 ORTHO05D004895 3.4e-26 122.5 139 44.6
Ciclev10007880m.g Citrus clementina HOM05D001920 ORTHO05D004895 3.4e-26 122.5 140 42.9
Eucgr.F03163 Eucalyptus grandis HOM05D001920 ORTHO05D004895 3.4e-26 122.5 146 42.5
Oeu018622.1 Olea europaea HOM05D001920 ORTHO05D004895 3.4e-26 122.5 140 41.4
Sed0026712 Sechium edule HOM05D001920 ORTHO05D004895 3.4e-26 122.5 140 42.9
TPR.G13113 Trifolium pratense HOM05D001920 ORTHO05D004895 3.4e-26 122.5 183 38.8
vmacro21977 Vaccinium macrocarpon HOM05D001920 ORTHO05D004895 3.4e-26 122.5 95 61.1
Atru.chr1.3803 Acer truncatum HOM05D001920 ORTHO05D004895 4.4e-26 122.1 149 45.0
Medtr1g015770 Medicago truncatula HOM05D001920 ORTHO05D004895 4.4e-26 122.1 183 39.3
arahy.Tifrunner.gnm1.ann1.ZI5CY8 Arachis hypogaea HOM05D001920 ORTHO05D004895 5.7e-26 121.7 129 45.7
AUR62039141 Chenopodium quinoa HOM05D001920 ORTHO05D004895 5.7e-26 121.7 140 45.7
Haze_18152 Corylus avellana HOM05D001920 ORTHO05D004895 5.7e-26 121.7 151 41.1
PSO063G2358 Papaver somniferum HOM05D001920 ORTHO05D004895 5.7e-26 121.7 140 45.0
Phvul.001G092600 Phaseolus vulgaris HOM05D001920 ORTHO05D004895 7.5e-26 121.3 140 41.4
AT2G26200 Arabidopsis thaliana HOM05D001920 ORTHO05D004895 9.8e-26 120.9 140 44.3
Psat6g021640 Pisum sativum HOM05D001920 ORTHO05D004895 1.7e-25 120.2 140 41.4
HanXRQChr08g0234031 Helianthus annuus HOM05D001920 ORTHO05D004895 2.2e-25 119.8 133 45.1
Thhalv10001947m.g Eutrema salsugineum HOM05D001920 ORTHO05D004895 2.8e-25 119.4 140 45.0
CiPaw.15G036700 Carya illinoinensis HOM05D001920 ORTHO05D004895 3.7e-25 119.0 140 42.1
Prupe.1G408900 Prunus persica HOM05D001920 ORTHO05D004895 3.7e-25 119.0 140 42.9
HPP92_005010 Vanilla planifolia HOM05D001920 ORTHO05D004895 3.7e-25 119.0 140 42.9
arahy.Tifrunner.gnm1.ann1.Z4JLGK Arachis hypogaea HOM05D001920 ORTHO05D004895 6.3e-25 118.2 151 41.1
Aa31LG5G9590 Aethionema arabicum HOM05D001920 ORTHO05D004895 8.3e-25 117.9 158 41.1
Pp3c15_20230 Physcomitrium patens HOM05D001920 ORTHO05D004895 8.3e-25 117.9 96 54.2
SEGI_07454 Sequoiadendron giganteum HOM05D001920 ORTHO05D004895 1.1e-24 117.5 101 52.5
A04p20270 Brassica napus HOM05D001920 ORTHO05D004895 1.4e-24 117.1 140 43.6
C04p55980 Brassica napus HOM05D001920 ORTHO05D004895 1.4e-24 117.1 140 43.6
BolC4t27131H Brassica oleracea HOM05D001920 ORTHO05D004895 1.4e-24 117.1 140 43.6
MD08G1065700 Malus domestica HOM05D001920 ORTHO05D004895 1.4e-24 117.1 166 40.4
ECA247G3878 Erigeron canadensis HOM05D001920 ORTHO05D004895 2.4e-24 116.3 149 43.0
SMO352G0077 Selaginella moellendorffii HOM05D001920 ORTHO05D004895 4.1e-24 115.5 149 38.9
SGA_v2.0_scaffold20G09202 Striga asiatica HOM05D001920 ORTHO05D004895 4.1e-24 115.5 116 46.6
CARHR115020 Cardamine hirsuta HOM05D001920 ORTHO05D004895 5.4e-24 115.2 140 41.4
BraA04t17606Z Brassica rapa HOM05D001920 ORTHO05D004895 7.0e-24 114.8 146 41.8
vmacro20642 Vaccinium macrocarpon HOM05D001920 ORTHO05D004895 7.0e-24 114.8 176 39.2
Lalb_Chr24g0399761 Lupinus albus HOM05D001920 ORTHO05D004895 1.6e-23 113.6 116 48.3
Gohir.D06G085100 Gossypium hirsutum HOM05D001920 ORTHO05D004895 2.7e-23 112.8 138 42.0
SHI18719 Sapria himalayana HOM05D001920 ORTHO05D004895 3.5e-23 112.5 120 49.2
Mapoly0046s0004 Marchantia polymorpha HOM05D001920 ORTHO05D004895 4.5e-23 112.1 96 53.1
Rhsim12G0208300 Rhododendron simsii HOM05D001920 ORTHO05D004895 5.9e-23 111.7 96 56.2
ClCG05G018010 Citrullus lanatus HOM05D001920 ORTHO05D004895 7.8e-23 111.3 113 45.1
AagrBONN_evm.TU.Sc2ySwM_344.2922 Anthoceros agrestis HOM05D001920 ORTHO05D004895 1.3e-22 110.5 96 53.1
vmacro17039 Vaccinium macrocarpon HOM05D001920 ORTHO05D004895 2.9e-22 109.4 133 40.6
MELO3C016884.2 Cucumis melo HOM05D001920 ORTHO05D004895 3.8e-22 109.0 116 41.4
CSS0031669 Camellia sinensis var. sinensis HOM05D001920 ORTHO05D004895 2.5e-21 106.3 92 57.6
COL.COLO4_30718 Corchorus olitorius HOM05D001920 ORTHO05D004895 2.1e-20 103.2 119 42.9
CAN.G1312.6 Capsicum annuum HOM05D001920 ORTHO05D004895 2.9e-17 92.8 79 55.7
Lsat_1_v5_gn_1_37201 Lactuca sativa HOM05D001920 ORTHO05D004895 4.1e-16 89.0 188 29.3
Duzib192G0188 Durio zibethinus HOM05D001920 ORTHO05D004895 5.9e-15 85.1 72 58.3
Ciclev10027563m.g Citrus clementina HOM05D001920 ORTHO05D004895 8.6e-14 81.3 129 40.3
MCO01G470 Micromonas commoda HOM05D001920 ORTHO05D004895 2.6e-10 69.7 104 36.5
CDE02G3203 Ceratophyllum demersum HOM05D001920 ORTHO05D004895 7.5e-10 68.2 63 50.8
Cre05.g239050 Chlamydomonas reinhardtii HOM05D001920 ORTHO05D004895 6.4e-09 65.1 112 33.9
MCO02G156 Micromonas commoda HOM05D001920 ORTHO05D004895 4.1e-08 62.4 98 33.7
Rhsim12G0208400 Rhododendron simsii HOM05D001920 ORTHO05D000291 4.6e-07 58.9 69 42.0


User provided reference genes

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