Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.6e-166 589.3 304 100.0
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 3.2e-162 575.1 304 97.7
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 7.2e-146 520.8 310 85.8
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 9.1e-141 503.8 310 82.9
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 4.8e-134 481.5 305 81.6
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 1.8e-125 453.0 309 77.3
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 1.4e-104 383.6 289 67.8
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 5.6e-98 361.7 305 63.0
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 6.1e-97 358.2 300 63.0
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 3.1e-96 355.9 318 59.7
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 6.8e-96 354.8 316 62.3
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 4.4e-95 352.1 308 62.7
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 9.8e-95 350.9 306 59.5
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.7e-94 350.1 308 59.1
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 2.2e-94 349.7 309 62.1
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 3.2e-93 345.9 309 59.2
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 9.2e-93 344.4 309 60.8
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 4.6e-92 342.0 321 58.3
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 3.0e-91 339.3 300 62.3
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 3.9e-91 339.0 306 58.8
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 8.6e-91 337.8 338 56.8
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 8.6e-91 337.8 308 59.7
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 7.3e-90 334.7 260 65.8
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 9.5e-90 334.3 238 71.4
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 1.2e-89 334.0 251 66.5
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 4.7e-89 332.0 249 67.5
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 4.7e-89 332.0 319 57.7
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.7e-89 332.0 251 66.5
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 8.0e-89 331.3 323 57.3
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 1.8e-88 330.1 304 60.2
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 1.8e-88 330.1 263 65.4
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 3.1e-88 329.3 313 58.1
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 5.2e-88 328.6 352 52.8
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.2e-87 327.4 314 57.6
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 1.2e-87 327.4 303 57.8
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 1.5e-87 327.0 261 65.1
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 3.4e-87 325.9 240 65.8
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 3.4e-87 325.9 294 58.2
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.4e-87 325.5 251 65.7
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 7.5e-87 324.7 312 57.4
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 7.5e-87 324.7 318 55.3
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 2.2e-86 323.2 306 58.8
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 2.9e-86 322.8 319 57.1
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 4.9e-86 322.0 282 60.6
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 1.1e-85 320.9 316 54.4
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 1.1e-85 320.9 344 54.7
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 1.9e-85 320.1 257 64.2
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 4.1e-85 318.9 316 54.4
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 5.4e-85 318.5 264 62.1
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 1.2e-84 317.4 313 56.9
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.6e-84 317.0 305 57.7
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 2.7e-84 316.2 262 62.6
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 4.6e-84 315.5 334 55.1
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 4.6e-84 315.5 269 61.7
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 6.0e-84 315.1 319 55.5
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 7.8e-84 314.7 341 54.0
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 7.8e-84 314.7 315 55.2
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 1.0e-83 314.3 327 54.7
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 2.3e-83 313.2 239 65.7
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 2.3e-83 313.2 315 52.1
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 6.6e-83 311.6 324 51.9
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 6.6e-83 311.6 306 53.3
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 1.5e-82 310.5 314 51.9
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 3.3e-82 309.3 313 55.0
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 3.3e-82 309.3 334 54.2
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 4.3e-82 308.9 257 62.3
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 7.3e-82 308.1 217 67.3
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 9.5e-82 307.8 315 54.6
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 1.6e-81 307.0 310 54.2
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 2.1e-81 306.6 239 61.9
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 3.6e-81 305.8 242 64.0
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 4.7e-81 305.4 312 55.1
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 4.7e-81 305.4 313 54.6
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 8.1e-81 304.7 310 54.5
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 8.1e-81 304.7 254 61.8
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 3.1e-80 302.8 313 54.3
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 3.1e-80 302.8 322 51.2
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 3.1e-80 302.8 322 51.2
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 4.0e-80 302.4 303 54.8
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 4.0e-80 302.4 310 54.2
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 5.2e-80 302.0 256 60.5
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.2e-79 300.8 267 59.6
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 2.0e-79 300.1 266 59.0
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.6e-79 299.7 274 57.3
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 3.4e-79 299.3 304 54.3
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 7.1e-77 291.6 303 52.5
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 9.2e-77 291.2 294 51.7
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 9.2e-77 291.2 241 62.7
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 1.2e-76 290.8 193 70.5
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 1.6e-76 290.4 290 51.7
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 2.1e-76 290.0 253 61.7
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.7e-76 289.7 244 59.4
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 1.3e-75 287.3 278 56.1
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 1.1e-72 277.7 149 89.3
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.4e-72 276.6 269 55.8
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 3.1e-72 276.2 332 47.0
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 9.9e-71 271.2 355 47.0
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 4.9e-70 268.9 315 49.8
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 5.4e-69 265.4 196 69.4
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 1.2e-68 264.2 321 48.3
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 3.0e-67 259.6 290 49.7
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 6.6e-67 258.5 269 52.4
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 6.4e-62 241.9 305 48.9
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.7e-59 233.8 189 61.9
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 3.9e-59 232.6 179 64.2
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 7.3e-58 228.4 239 51.0
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 6.9e-56 221.9 224 53.6
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 3.4e-55 219.5 141 74.5
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 8.4e-54 214.9 224 51.8
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 3.5e-52 209.5 220 52.3
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.0e-46 191.4 163 63.8
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 5.5e-45 185.7 235 43.4
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 2.7e-44 183.3 258 41.9
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 3.0e-43 179.9 225 45.8
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 1.9e-42 177.2 224 46.0
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 1.9e-42 177.2 224 46.0
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 5.0e-38 162.5 211 44.1
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 8.4e-38 161.8 263 38.0
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 1.4e-29 134.4 179 40.8
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 3.2e-29 133.3 197 43.7
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 4.6e-28 129.4 91 70.3
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 1.7e-25 120.9 226 36.3
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 2.2e-25 120.6 84 71.4
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 3.2e-13 80.1 75 57.3
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 7.0e-08 62.4 120 28.3


User provided reference genes

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