Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 8.8e-251 869.8 427 100.0
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 9.8e-234 813.1 428 94.4
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.2e-210 736.5 428 85.7
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 1.5e-210 736.1 430 85.3
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 2.2e-209 732.3 428 84.8
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 1.3e-196 689.9 428 82.7
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 8.2e-172 607.4 387 78.6
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 2.3e-158 562.8 434 66.6
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 3.9e-158 562.0 416 69.2
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 9.1e-155 550.8 371 74.4
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 3.4e-154 548.9 371 73.6
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 2.2e-153 546.2 446 64.6
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 5.2e-150 535.0 431 65.4
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 2.2e-148 529.6 423 64.3
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 3.7e-148 528.9 416 64.7
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 1.1e-147 527.3 410 66.8
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 7.7e-146 521.2 440 64.5
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 1.7e-145 520.0 428 64.0
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 6.5e-145 518.1 387 66.7
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 2.5e-144 516.2 393 66.2
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 1.6e-143 513.5 419 63.0
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 8.0e-143 511.1 396 65.4
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 2.3e-142 509.6 417 63.1
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 2.6e-141 506.1 377 68.7
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 4.4e-141 505.4 374 68.7
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 1.3e-140 503.8 376 67.0
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 1.7e-140 503.4 416 62.5
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 3.7e-140 502.3 429 60.8
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.8e-139 500.0 429 60.6
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.4e-139 499.6 429 60.4
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 4.1e-139 498.8 429 60.6
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 5.3e-139 498.4 427 62.8
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 1.2e-138 497.3 421 61.3
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 1.2e-138 497.3 436 61.2
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 2.0e-138 496.5 421 60.3
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 2.0e-138 496.5 381 64.8
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 2.7e-138 496.1 426 62.0
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 3.5e-138 495.7 438 60.5
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 7.7e-138 494.6 410 62.0
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.2e-137 493.0 417 62.4
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 2.2e-137 493.0 417 62.4
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 5.0e-137 491.9 409 62.1
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 1.1e-136 490.7 423 60.8
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.5e-136 490.3 417 61.6
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 2.5e-136 489.6 383 64.2
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 2.7e-135 486.1 381 64.0
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 3.6e-135 485.7 404 62.4
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 2.6e-133 479.6 375 64.0
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 1.3e-132 477.2 376 63.8
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 3.7e-132 475.7 383 63.2
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 4.8e-132 475.3 418 60.0
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 1.8e-131 473.4 437 57.7
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 1.8e-131 473.4 374 63.4
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 5.9e-130 468.4 398 61.1
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 8.6e-129 464.5 376 62.8
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 5.5e-128 461.8 427 57.6
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 9.5e-128 461.1 424 57.8
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 1.6e-127 460.3 377 62.3
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 2.3e-126 456.4 415 57.8
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 8.9e-126 454.5 421 57.5
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 4.9e-124 448.7 326 67.2
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 5.9e-122 441.8 462 54.5
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.0e-121 441.0 326 66.0
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 2.3e-121 439.9 386 59.3
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 2.9e-121 439.5 386 59.3
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 1.5e-120 437.2 378 60.3
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 1.2e-119 434.1 330 63.0
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 6.1e-119 431.8 408 57.6
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 3.4e-117 426.0 348 62.6
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 9.8e-117 424.5 393 57.5
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 1.3e-116 424.1 406 57.1
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 7.3e-112 408.3 423 53.4
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 3.4e-109 399.4 423 53.7
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 1.3e-108 397.5 379 57.0
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 2.9e-108 396.4 383 55.1
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 4.3e-104 382.5 252 74.2
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 2.4e-99 366.7 305 61.0
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 3.6e-95 352.8 289 60.6
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 2.9e-92 343.2 391 47.8
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 4.9e-92 342.4 254 70.1
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 1.4e-91 340.9 247 68.8
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 7.4e-72 275.4 273 54.9
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 1.3e-65 254.6 398 39.4
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 4.3e-64 249.6 164 78.7
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 5.3e-62 242.7 414 37.0
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 1.9e-59 234.2 376 39.9
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 8.2e-55 218.8 214 55.6
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 7.7e-53 212.2 164 67.1
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 8.8e-49 198.7 210 51.0
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 2.4e-46 190.7 162 62.3
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 1.3e-39 168.3 117 67.5
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 6.8e-17 92.8 78 53.8
MCO02G191 Micromonas commoda HOM05D007414 ORTHO05D009482 2.0e-13 81.3 342 26.6
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 1.0e-12 79.0 266 27.8
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 2.1e-10 71.2 70 50.0
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 4.7e-10 70.1 395 24.3
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 2.3e-09 67.8 419 23.6
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 6.8e-09 66.2 367 24.8
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 1.5e-08 65.1 276 26.8
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 1.5e-08 65.1 439 23.2
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 2.0e-08 64.7 366 24.6
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 3.4e-08 63.9 298 26.2
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 3.4e-08 63.9 69 43.5
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 4.4e-08 63.5 359 24.5
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 4.4e-08 63.5 369 23.8
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 5.7e-08 63.2 362 26.0
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 5.7e-08 63.2 358 24.3
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 5.7e-08 63.2 393 24.4
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 9.8e-08 62.4 367 25.6
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 9.8e-08 62.4 369 23.8
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 1.3e-07 62.0 69 50.7
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.7e-07 61.6 299 25.8
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.7e-07 61.6 322 26.7
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 2.2e-07 61.2 425 23.8
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 2.2e-07 61.2 367 23.7
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 2.2e-07 61.2 278 26.6
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 2.2e-07 61.2 364 24.2
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.2e-07 61.2 277 26.0
Oeu014631.1 Olea europaea HOM05D007414 ORTHO05D009482 2.2e-07 61.2 39 74.4
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.2e-07 61.2 312 26.3
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 2.9e-07 60.8 362 24.6
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 2.9e-07 60.8 300 26.0
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 3.7e-07 60.5 425 23.5
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 3.7e-07 60.5 354 23.4
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 3.7e-07 60.5 365 23.8
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 6.3e-07 59.7 364 24.2
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 8.3e-07 59.3 306 23.9
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 8.3e-07 59.3 268 25.7
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 8.3e-07 59.3 367 24.5
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.1e-06 58.9 277 24.9
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.4e-06 58.5 304 25.7
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 1.4e-06 58.5 331 25.7
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.4e-06 58.5 305 26.2
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 1.8e-06 58.2 277 24.2
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 1.8e-06 58.2 388 24.5
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 2.4e-06 57.8 358 23.5
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.4e-06 57.8 323 26.0
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 3.2e-06 57.4 277 24.2
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 3.2e-06 57.4 394 22.6
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.2e-06 57.4 277 24.5
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.2e-06 57.4 267 26.2
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 3.2e-06 57.4 364 23.9
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 3.2e-06 57.4 364 23.9
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 4.1e-06 57.0 268 25.4
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 4.1e-06 57.0 371 23.5
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 4.1e-06 57.0 334 24.9
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 4.1e-06 57.0 272 26.5
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 4.1e-06 57.0 364 23.4
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 5.4e-06 56.6 268 25.4
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.4e-06 56.6 304 25.7
TPR.G34603 Trifolium pratense HOM05D007414 ORTHO05D009482 5.4e-06 56.6 40 62.5
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 7.0e-06 56.2 312 24.4
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 9.2e-06 55.8 277 24.5


User provided reference genes

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