Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 3.6e-291 1004.2 508 100.0
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 1.5e-268 929.1 476 98.7
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 2.3e-253 878.6 476 92.2
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 3.9e-253 877.9 476 92.6
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 1.9e-252 875.5 476 92.2
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 4.3e-252 874.4 476 92.0
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 8.1e-235 817.0 488 86.5
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 6.0e-214 747.7 477 79.9
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 6.0e-206 721.1 477 75.9
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 6.0e-206 721.1 479 77.0
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 2.3e-205 719.2 477 76.5
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 3.0e-205 718.8 513 72.9
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 1.3e-203 713.4 478 76.6
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 4.8e-203 711.4 479 76.6
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 7.6e-201 704.1 478 74.3
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 7.6e-201 704.1 476 75.2
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 2.9e-200 702.2 477 75.1
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 1.1e-199 700.3 477 74.6
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 1.1e-199 700.3 477 73.8
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 7.1e-199 697.6 477 73.4
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 9.3e-199 697.2 476 74.6
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 1.2e-198 696.8 475 74.3
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.2e-198 696.8 475 74.3
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 4.6e-198 694.9 481 74.6
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 7.9e-198 694.1 475 74.1
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 1.0e-197 693.7 477 74.6
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 1.3e-197 693.3 477 74.0
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 2.3e-197 692.6 486 72.8
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 3.0e-197 692.2 477 74.6
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 8.7e-197 690.6 482 72.8
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 2.5e-196 689.1 476 75.0
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 2.5e-196 689.1 477 73.6
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 1.6e-195 686.4 477 72.3
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 2.2e-195 686.0 477 72.7
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 3.1e-194 682.2 477 72.5
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 1.2e-193 680.2 478 73.8
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 2.0e-193 679.5 477 72.1
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 1.0e-192 677.2 477 71.7
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 2.9e-192 675.6 476 72.5
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 1.1e-191 673.7 478 73.4
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 1.9e-191 672.9 477 72.1
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 1.9e-191 672.9 477 71.5
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 4.2e-191 671.8 477 72.3
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 1.2e-190 670.2 477 72.1
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 2.1e-190 669.5 478 73.0
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 2.7e-190 669.1 471 72.0
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 3.6e-190 668.7 477 70.4
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 4.6e-190 668.3 477 72.5
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 6.1e-190 667.9 478 73.0
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 1.0e-189 667.2 494 68.8
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.4e-189 666.8 477 71.1
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.4e-189 666.8 477 71.1
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 5.1e-189 664.8 477 71.5
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 5.1e-189 664.8 477 69.8
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 5.7e-188 661.4 477 69.4
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 9.7e-188 660.6 477 70.0
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 2.8e-187 659.1 509 67.4
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 2.8e-187 659.1 477 71.7
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 8.2e-187 657.5 532 66.0
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 9.1e-186 654.1 476 69.1
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 1.5e-185 653.3 477 69.6
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 4.5e-185 651.7 477 69.8
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 4.5e-185 651.7 477 69.8
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 1.3e-184 650.2 475 69.3
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 5.5e-183 644.8 475 69.1
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 2.7e-182 642.5 477 69.6
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 5.1e-181 638.3 477 69.8
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 9.7e-180 634.0 477 67.3
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.3e-179 633.6 479 68.3
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 1.8e-178 629.8 477 68.6
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 4.1e-178 628.6 477 68.6
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 9.1e-178 627.5 476 69.1
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 9.1e-178 627.5 476 70.0
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 4.5e-177 625.2 478 69.9
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 8.5e-176 620.9 427 74.5
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 1.4e-175 620.2 421 75.1
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.9e-175 619.8 475 68.0
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 2.5e-175 619.4 477 67.5
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 6.1e-174 614.8 448 72.8
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 5.2e-173 611.7 477 66.0
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 1.1e-172 610.5 477 66.2
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 1.1e-172 610.5 477 66.2
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 1.1e-172 610.5 477 66.2
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 4.4e-172 608.6 477 66.5
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 4.1e-170 602.1 477 66.9
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 5.3e-170 601.7 485 65.8
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 5.0e-168 595.1 471 68.6
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 1.6e-166 590.1 384 78.6
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 6.1e-166 588.2 476 64.3
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 6.7e-165 584.7 478 66.5
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 1.2e-164 583.9 476 63.9
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 5.7e-164 581.6 421 69.4
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 2.0e-161 573.2 414 72.9
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 6.5e-160 568.2 477 63.5
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 1.9e-159 566.6 381 76.6
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 2.5e-159 566.2 477 63.9
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 6.8e-157 558.1 476 63.2
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 1.5e-156 557.0 494 60.9
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 1.6e-153 547.0 382 72.5
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 3.3e-151 539.3 381 71.4
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 5.7e-148 528.5 577 52.5
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 1.2e-145 520.8 484 57.2
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 6.6e-144 515.0 344 77.6
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 6.4e-139 498.4 475 56.4
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 3.0e-128 463.0 807 39.5
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 5.8e-124 448.7 475 53.1
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.9e-123 446.4 309 73.5
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 8.3e-123 444.9 381 59.8
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 1.3e-115 421.0 309 69.3
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 1.4e-114 417.5 343 62.4
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 6.2e-110 402.1 456 51.3
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 1.8e-109 400.6 457 51.0
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 1.3e-107 394.4 455 49.5
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 3.5e-105 386.3 457 50.3
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 7.8e-105 385.2 455 49.9
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 3.3e-103 379.8 456 48.9
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 4.8e-102 375.9 456 48.0
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 8.1e-102 375.2 479 46.8
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 1.8e-101 374.0 442 47.7
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 1.4e-98 364.4 418 48.8
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 2.4e-98 363.6 456 47.6
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 1.6e-94 350.9 378 52.1
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 4.8e-94 349.4 378 51.3
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 2.4e-93 347.1 496 44.8
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 3.1e-93 346.7 228 75.9
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 4.9e-91 339.3 240 72.1
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 1.4e-90 337.8 414 47.3
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 4.6e-89 332.8 247 69.6
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 2.5e-87 327.0 250 68.8
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 2.5e-79 300.4 455 43.7
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 5.0e-75 286.2 490 37.8
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 1.1e-55 221.9 176 65.9
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 3.3e-55 220.3 319 42.3
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 1.1e-50 205.3 218 52.8
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 1.2e-44 185.3 453 31.8
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 1.1e-42 178.7 203 48.3
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 2.5e-42 177.6 514 30.2
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 1.2e-31 142.1 98 70.4
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 4.4e-31 140.2 94 69.1
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 4.6e-20 103.6 90 56.7
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 4.4e-15 87.0 142 36.6
Dinv13063 Davidia involucrata HOM05D001663 ORTHO05D005717 5.8e-15 86.7 63 71.4
SEGI_07227 Sequoiadendron giganteum HOM05D001663 ORTHO05D015595 6.8e-08 63.2 88 39.8
HanXRQChr01g0001151 Helianthus annuus HOM05D001663 ORTHO05D005717 5.8e-07 60.1 141 35.5


User provided reference genes

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