Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 3.5e-170 601.7 333 100.0
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 3.3e-152 542.0 332 91.3
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 7.4e-128 461.1 362 72.7
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 8.4e-124 447.6 354 72.3
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 7.1e-123 444.5 362 71.3
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 1.7e-111 406.8 330 75.5
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 5.9e-109 398.3 361 65.9
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.3e-97 359.8 331 65.0
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.4e-94 350.5 331 65.3
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 3.1e-94 349.4 334 62.6
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 7.0e-94 348.2 337 62.3
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 2.9e-92 342.8 335 60.9
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.9e-91 340.1 310 64.8
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 2.3e-89 333.2 332 59.3
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 2.2e-87 326.6 311 62.7
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.1e-86 324.3 321 64.2
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 1.8e-86 323.6 293 66.2
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.4e-86 323.2 321 63.6
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 2.4e-86 323.2 330 60.3
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 1.2e-85 320.9 337 60.5
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 1.7e-84 317.0 340 59.4
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 8.5e-84 314.7 325 57.8
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.1e-83 314.3 334 59.3
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 1.5e-83 313.9 334 60.2
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 1.9e-83 313.5 331 58.3
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 7.2e-83 311.6 338 59.2
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 9.4e-83 311.2 304 60.5
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 1.2e-82 310.8 295 60.7
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 3.6e-82 309.3 347 53.6
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 4.7e-82 308.9 339 60.8
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 1.8e-81 307.0 311 60.5
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 1.2e-80 304.3 313 58.5
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.2e-80 304.3 315 59.4
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 2.0e-80 303.5 343 57.4
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.4e-80 302.8 315 59.4
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 4.4e-80 302.4 337 61.1
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 4.4e-80 302.4 284 62.3
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 9.8e-80 301.2 313 58.8
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 9.8e-80 301.2 316 58.5
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 1.3e-79 300.8 339 55.5
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 2.2e-79 300.1 315 57.5
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 3.7e-79 299.3 314 57.0
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 6.3e-79 298.5 317 59.3
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.1e-78 297.7 317 56.8
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 1.8e-78 297.0 333 56.8
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 4.1e-78 295.8 325 56.3
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 5.4e-78 295.4 335 55.5
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 9.1e-78 294.7 325 56.6
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 9.1e-78 294.7 354 59.3
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 2.0e-77 293.5 346 51.4
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 7.7e-77 291.6 316 58.2
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 1.0e-76 291.2 316 56.6
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.0e-76 291.2 320 58.1
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 1.3e-76 290.8 329 54.7
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 6.6e-76 288.5 314 54.8
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 8.6e-76 288.1 317 56.5
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 1.1e-75 287.7 317 57.1
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.5e-75 287.3 335 54.3
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 1.5e-75 287.3 321 58.9
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 1.5e-75 287.3 324 57.7
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 3.3e-75 286.2 352 51.4
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 5.5e-75 285.4 397 50.4
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 1.2e-74 284.3 343 53.1
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 1.6e-74 283.9 318 55.3
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 2.8e-74 283.1 346 52.0
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 2.8e-74 283.1 356 52.0
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 2.3e-73 280.0 336 58.0
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 4.0e-73 279.3 348 51.7
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 6.8e-73 278.5 343 51.9
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 4.4e-72 275.8 335 55.5
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 5.7e-72 275.4 318 54.4
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 5.7e-72 275.4 252 62.7
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 1.7e-71 273.9 338 51.2
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 2.2e-71 273.5 345 53.6
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 2.8e-71 273.1 213 69.5
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 2.8e-71 273.1 344 51.7
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 4.9e-71 272.3 305 55.1
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 1.4e-70 270.8 314 59.6
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 9.2e-70 268.1 329 56.8
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 2.0e-69 266.9 316 55.7
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 2.7e-69 266.5 349 50.7
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 6.6e-68 261.9 280 58.6
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 3.3e-67 259.6 291 54.3
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 7.3e-67 258.5 288 54.5
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 9.5e-67 258.1 339 52.5
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 1.2e-66 257.7 331 54.1
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.6e-66 257.3 342 52.3
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 1.6e-66 257.3 342 52.3
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 4.7e-66 255.8 336 54.5
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 4.7e-66 255.8 339 51.3
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 8.0e-66 255.0 318 50.6
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 1.8e-65 253.8 323 52.9
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 9.8e-64 248.1 332 49.7
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 1.3e-63 247.7 303 52.8
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 1.7e-63 247.3 228 65.4
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.7e-63 246.1 336 50.6
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 8.3e-63 245.0 338 50.0
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 1.4e-62 244.2 336 53.3
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.9e-62 243.8 289 51.2
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 4.6e-61 239.2 170 74.7
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.7e-60 237.3 336 48.8
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.7e-60 237.3 327 51.4
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 3.0e-60 236.5 243 56.4
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 5.0e-60 235.7 304 48.0
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 3.3e-59 233.0 378 48.4
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 4.3e-59 232.6 341 45.2
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 9.5e-59 231.5 293 53.6
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 6.2e-58 228.8 266 56.4
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.6e-56 223.4 359 48.7
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.9e-54 217.2 291 48.5
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 7.1e-54 215.3 157 73.9
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 3.0e-52 209.9 336 46.1
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 8.6e-52 208.4 254 53.1
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 5.6e-51 205.7 268 56.0
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 1.1e-49 201.4 207 55.6
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.1e-46 191.4 311 46.0
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 3.2e-46 189.9 113 86.7
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 5.4e-46 189.1 201 54.7
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 3.9e-44 183.0 338 42.9
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 6.6e-44 182.2 114 83.3
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 1.1e-43 181.4 346 40.5
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 2.8e-42 176.8 212 52.4
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 5.2e-41 172.6 108 84.3
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 3.2e-38 163.3 294 40.5
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.8e-34 150.2 152 56.6
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 5.4e-30 136.0 217 47.0
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 3.9e-28 129.8 200 42.0
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 4.3e-27 126.3 103 64.1
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.1e-25 121.7 179 48.0
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 3.4e-24 116.7 114 56.1
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 3.8e-23 113.2 68 80.9
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 3.3e-19 100.1 190 37.9
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 3.3e-19 100.1 190 37.9
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 1.1e-17 95.1 87 59.8
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 1.4e-17 94.7 84 64.3
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 2.4e-17 94.0 205 36.1
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 1.4e-14 84.7 214 31.8
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 4.6e-13 79.7 336 31.8
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 3.7e-10 70.1 66 56.1
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 7.6e-08 62.4 51 64.7
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 5.0e-07 59.7 168 35.1


User provided reference genes

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