Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 2.7e-206 721.8 394 100.0
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 2.7e-185 652.1 397 90.9
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 8.6e-176 620.5 395 85.1
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 1.1e-167 593.6 395 82.3
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 4.3e-167 591.7 397 83.4
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 4.0e-165 585.1 410 79.5
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 3.9e-152 542.0 373 81.5
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 6.9e-141 504.6 414 69.6
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 6.2e-134 481.5 405 67.4
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 1.2e-132 477.2 360 70.8
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 5.8e-132 474.9 411 64.7
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 1.0e-131 474.2 405 70.1
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 1.0e-131 474.2 366 69.9
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 2.2e-131 473.0 417 65.5
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 6.5e-131 471.5 404 66.3
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 6.5e-131 471.5 414 62.1
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 8.4e-131 471.1 365 69.9
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 2.5e-130 469.5 426 62.7
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 9.3e-130 467.6 411 64.0
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 1.2e-129 467.2 364 66.8
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 2.1e-129 466.5 415 62.2
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 4.6e-129 465.3 415 61.9
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 6.0e-129 464.9 411 63.7
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 1.8e-128 463.4 415 64.3
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 3.0e-128 462.6 362 68.8
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 1.1e-127 460.7 412 62.9
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.1e-127 460.7 418 62.0
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 2.2e-126 456.4 415 62.7
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 2.2e-126 456.4 411 62.3
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 2.8e-126 456.1 416 61.5
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 2.8e-126 456.1 413 64.4
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 2.8e-126 456.1 420 63.1
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 1.8e-125 453.4 407 62.7
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 5.3e-125 451.8 429 60.8
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.0e-124 449.9 428 58.9
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 3.4e-124 449.1 408 61.8
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.0e-123 447.6 413 61.7
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.3e-123 447.2 413 63.4
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 1.1e-122 444.1 407 64.1
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 1.4e-122 443.7 407 62.2
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 3.2e-122 442.6 408 61.3
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 4.2e-122 442.2 395 64.8
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 4.2e-122 442.2 417 60.7
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 5.5e-122 441.8 365 67.1
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 7.2e-122 441.4 428 58.6
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 9.3e-122 441.0 402 61.2
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 1.6e-121 440.3 377 64.7
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 2.1e-121 439.9 413 60.8
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 1.0e-120 437.6 340 69.7
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 1.0e-120 437.6 430 60.2
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 3.9e-120 435.6 401 60.6
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 5.1e-120 435.3 429 59.4
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 1.1e-119 434.1 415 60.0
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 1.1e-119 434.1 409 60.6
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 7.4e-119 431.4 416 60.1
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 9.7e-119 431.0 418 59.6
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 1.7e-118 430.3 430 58.6
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 6.3e-118 428.3 418 58.4
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 8.2e-118 427.9 437 57.7
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.4e-117 427.2 428 58.6
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 3.1e-117 426.0 428 58.6
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 3.1e-117 426.0 452 55.3
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 3.1e-117 426.0 430 57.7
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 4.1e-117 425.6 428 57.9
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 5.3e-117 425.2 443 57.1
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.9e-117 424.9 428 58.2
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 2.0e-116 423.3 342 67.0
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.0e-116 423.3 430 57.7
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 2.6e-116 422.9 408 60.3
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 7.7e-116 421.4 413 58.4
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 1.7e-115 420.2 422 57.8
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.2e-115 419.9 408 60.0
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.1e-114 417.5 434 56.7
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 1.9e-114 416.8 434 56.5
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 3.2e-114 416.0 411 58.6
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 7.2e-114 414.8 432 56.7
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 9.4e-114 414.5 435 57.5
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 2.1e-113 413.3 442 57.2
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 2.7e-113 412.9 406 57.9
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 3.6e-113 412.5 531 49.9
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 6.1e-113 411.8 429 55.9
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 2.3e-112 409.8 411 58.2
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 6.7e-112 408.3 430 55.1
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 3.3e-111 406.0 355 63.9
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 1.7e-110 403.7 437 54.5
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.8e-110 402.9 433 56.1
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 2.4e-109 399.8 429 55.5
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.1e-109 399.4 433 55.9
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 5.3e-109 398.7 433 55.9
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 5.9e-108 395.2 436 54.1
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 1.2e-105 387.5 406 57.6
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 2.1e-105 386.7 408 55.9
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 1.8e-104 383.6 414 56.0
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 3.9e-104 382.5 384 56.8
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 2.8e-102 376.3 427 52.5
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 4.8e-102 375.6 427 52.5
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 2.4e-101 373.2 326 62.6
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.2e-95 354.4 333 59.8
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 5.7e-95 352.1 359 56.3
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 7.0e-93 345.1 344 54.9
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 7.2e-90 335.1 329 60.5
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 9.8e-87 324.7 309 59.9
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 2.0e-84 317.0 276 62.0
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 1.0e-80 304.7 396 49.0
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.2e-78 297.0 264 57.2
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 1.0e-75 288.1 326 54.0
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 2.9e-75 286.6 329 51.1
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 7.5e-71 271.9 413 44.6
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.9e-70 270.0 300 51.7
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 5.0e-67 259.2 208 71.2
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 1.7e-54 217.6 383 38.1
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 1.3e-46 191.4 127 76.4
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 2.2e-46 190.7 196 55.6
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 5.4e-45 186.0 134 70.9
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 9.9e-31 138.7 88 73.9
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.8e-24 117.9 327 28.7
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 2.9e-22 110.5 479 25.5
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 5.1e-19 99.8 86 62.8
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 1.2e-15 88.6 142 47.9
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 6.7e-11 72.8 66 51.5
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 4.3e-10 70.1 46 65.2
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 7.4e-10 69.3 46 63.0
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 4.8e-09 66.6 323 23.2
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 5.3e-08 63.2 168 31.5
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 1.2e-07 62.0 123 39.8
CDE06G2524 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 7.7e-07 59.3 73 47.9


User provided reference genes

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