Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 2.7e-177 625.5 402 100.0
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 6.8e-152 541.2 407 81.6
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 2.1e-124 449.9 409 77.8
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 4.7e-121 438.7 414 78.7
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 1.0e-115 421.0 413 76.5
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 4.3e-106 389.0 430 63.7
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 3.8e-102 375.9 428 64.7
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 1.2e-60 238.0 478 40.0
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.8e-51 207.6 399 38.1
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 1.8e-51 207.6 405 44.9
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 2.3e-51 207.2 439 39.2
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 8.8e-51 205.3 398 39.2
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 1.5e-50 204.5 353 56.1
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 7.5e-50 202.2 386 38.9
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 9.7e-50 201.8 399 37.6
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 9.1e-48 195.3 409 49.1
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 1.6e-47 194.5 607 31.0
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 1.3e-46 191.4 154 66.9
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 1.7e-46 191.0 473 37.4
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 2.9e-46 190.3 397 37.8
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 1.5e-45 188.0 154 67.5
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 4.2e-45 186.4 524 35.7
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 1.2e-44 184.9 485 34.2
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 3.6e-44 183.3 188 56.4
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 1.4e-43 181.4 465 36.8
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 2.3e-43 180.6 184 56.5
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 3.0e-43 180.3 431 35.5
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 4.0e-43 179.9 457 34.8
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 5.2e-43 179.5 465 33.8
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 6.8e-43 179.1 382 39.5
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.5e-42 177.9 418 40.0
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 1.5e-42 177.9 487 32.6
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 2.0e-42 177.6 403 36.0
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 4.4e-42 176.4 422 44.5
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 5.7e-42 176.0 430 35.8
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 5.7e-42 176.0 446 37.9
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 7.5e-42 175.6 157 62.4
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 7.5e-42 175.6 357 38.1
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 9.8e-42 175.3 383 39.2
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 9.8e-42 175.3 413 42.9
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 9.8e-42 175.3 384 40.9
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 1.3e-41 174.9 465 34.0
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 1.7e-41 174.5 393 38.9
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 1.7e-41 174.5 153 61.4
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 2.2e-41 174.1 479 32.4
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 2.2e-41 174.1 424 32.8
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 2.8e-41 173.7 154 63.0
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 4.8e-41 172.9 155 62.6
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 6.3e-41 172.6 412 42.5
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 6.3e-41 172.6 422 35.5
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 1.1e-40 171.8 493 32.5
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 1.1e-40 171.8 352 41.2
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 1.4e-40 171.4 475 32.2
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 1.4e-40 171.4 419 36.8
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 1.4e-40 171.4 165 59.4
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 1.4e-40 171.4 163 58.9
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 1.8e-40 171.0 384 47.1
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 4.1e-40 169.9 177 54.2
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 9.1e-40 168.7 387 42.4
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.2e-39 168.3 442 36.9
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 2.7e-39 167.2 422 34.8
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 2.7e-39 167.2 425 35.1
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 3.5e-39 166.8 121 71.1
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 4.5e-39 166.4 471 35.2
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 7.7e-39 165.6 138 66.7
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 2.3e-38 164.1 430 39.1
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 3.8e-38 163.3 450 42.0
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 6.5e-38 162.5 417 34.5
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 1.1e-37 161.8 99 78.8
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 1.9e-37 161.0 385 43.9
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 1.9e-37 161.0 391 41.4
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 1.9e-37 161.0 111 74.8
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 3.2e-37 160.2 422 38.6
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 3.2e-37 160.2 203 52.2
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 5.5e-37 159.5 422 41.5
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 1.2e-36 158.3 137 62.8
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 2.1e-36 157.5 163 55.2
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 2.1e-36 157.5 425 44.5
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 1.0e-35 155.2 153 56.9
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.4e-35 154.8 495 30.7
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 1.8e-35 154.5 144 59.7
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 1.8e-35 154.5 415 45.3
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 5.2e-35 152.9 157 56.7
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 1.2e-34 151.8 406 42.6
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 2.0e-34 151.0 98 78.6
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 4.4e-34 149.8 518 31.3
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 7.5e-34 149.1 111 68.5
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 1.3e-33 148.3 379 46.2
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 1.7e-33 147.9 435 40.9
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 1.1e-32 145.2 120 67.5
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 1.1e-32 145.2 120 67.5
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 1.4e-32 144.8 118 66.1
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 1.4e-32 144.8 118 66.1
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 1.4e-32 144.8 118 66.1
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 1.4e-32 144.8 139 56.1
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 2.4e-32 144.1 139 59.7
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 3.1e-32 143.7 108 69.4
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 3.1e-32 143.7 108 69.4
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 3.1e-32 143.7 108 69.4
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 7.0e-32 142.5 391 31.7
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 7.0e-32 142.5 517 32.1
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.2e-31 141.7 157 54.1
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 2.0e-31 141.0 382 42.4
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 7.8e-31 139.0 430 35.1
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 1.0e-30 138.7 176 52.3
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.0e-30 138.7 153 54.2
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.7e-30 137.9 421 31.1
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 9.5e-29 132.1 131 55.7
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 9.5e-29 132.1 131 55.7
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 1.3e-25 121.7 87 65.5
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 2.9e-25 120.6 153 46.4
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 1.1e-24 118.6 145 46.2
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 6.6e-22 109.4 97 61.9
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 6.6e-22 109.4 76 67.1
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 1.5e-21 108.2 127 51.2
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 1.9e-21 107.8 101 61.4
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.6e-20 104.8 124 54.0
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 2.8e-20 104.0 350 37.7
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 6.2e-20 102.8 554 27.6
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 1.1e-19 102.1 62 77.4
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.8e-19 101.3 191 40.3
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 1.5e-18 98.2 343 28.9
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 2.5e-13 80.9 93 57.0
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 1.4e-11 75.1 55 65.5
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 6.8e-11 72.8 123 39.0
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 8.9e-11 72.4 443 26.0
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 1.7e-09 68.2 80 55.0
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 2.9e-09 67.4 357 32.8
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 3.2e-08 63.9 34 85.3
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 3.2e-08 63.9 34 85.3
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 5.4e-08 63.2 78 52.6
MBI14_g15781_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 5.1e-06 56.6 199 30.7


User provided reference genes

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