Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 0.0e+00 1375.1 733 100.0
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 0.0e+00 1232.2 732 91.7
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 5.0e-270 934.5 776 73.5
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 3.8e-209 732.3 784 63.9
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 3.4e-202 709.1 777 62.4
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 5.7e-189 665.2 773 60.7
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 4.5e-162 575.9 766 53.8
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 4.0e-150 536.2 774 51.9
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 4.9e-116 422.9 795 46.9
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 2.5e-112 410.6 772 44.4
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 9.6e-112 408.7 779 42.4
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 6.4e-108 396.0 775 43.6
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 1.7e-105 387.9 763 40.8
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 4.5e-101 373.2 778 41.0
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 4.5e-101 373.2 765 41.3
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 7.6e-101 372.5 764 42.0
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 1.1e-99 368.6 754 41.2
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 2.3e-97 360.9 802 41.1
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 2.8e-95 354.0 778 40.0
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 1.1e-94 352.1 807 39.3
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 5.3e-94 349.7 790 40.6
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 5.3e-94 349.7 793 40.2
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 4.9e-92 343.2 757 41.0
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 1.4e-91 341.7 663 42.1
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 2.1e-90 337.8 772 39.9
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 1.1e-88 332.0 655 41.5
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 2.1e-87 327.8 811 39.1
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 5.3e-86 323.2 698 39.5
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 9.0e-86 322.4 639 42.7
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 2.2e-84 317.8 756 37.0
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 1.1e-83 315.5 756 37.0
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 1.4e-83 315.1 824 38.1
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 2.5e-83 314.3 834 38.2
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 6.0e-82 309.7 805 37.5
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 2.3e-81 307.8 846 37.0
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 6.7e-81 306.2 773 37.8
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 1.1e-80 305.4 710 40.1
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 3.3e-80 303.9 784 37.4
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 2.2e-79 301.2 764 36.6
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 1.2e-77 295.4 800 37.2
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 1.2e-77 295.4 730 38.4
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 2.0e-77 294.7 801 37.5
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 1.3e-76 292.0 623 42.4
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 1.7e-76 291.6 794 37.0
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 8.5e-76 289.3 731 38.7
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 1.1e-75 288.9 788 37.1
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.4e-75 288.5 731 38.3
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 4.2e-75 287.0 735 37.3
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 7.2e-75 286.2 732 38.3
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 7.2e-75 286.2 734 38.1
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 1.2e-74 285.4 732 37.4
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.2e-74 285.4 732 37.4
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 4.6e-74 283.5 763 36.2
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 1.4e-73 282.0 696 39.8
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 1.9e-72 278.1 807 36.9
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 1.3e-71 275.4 747 39.4
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 4.8e-71 273.5 740 35.7
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 4.8e-71 273.5 752 38.7
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 3.4e-69 267.3 682 37.8
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.0e-68 265.8 751 36.4
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 1.3e-68 265.4 762 35.2
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 1.4e-67 261.9 521 45.7
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 7.2e-67 259.6 753 34.7
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 2.1e-66 258.1 779 35.7
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 1.0e-65 255.8 795 35.7
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 3.0e-65 254.2 749 33.9
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 3.0e-65 254.2 782 37.9
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 8.8e-65 252.7 525 43.4
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 2.0e-64 251.5 776 36.5
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 7.4e-64 249.6 737 33.2
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 2.2e-63 248.1 716 34.9
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.2e-63 248.1 771 33.7
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 4.8e-63 246.9 719 34.8
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 1.4e-62 245.4 746 34.2
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 1.8e-62 245.0 713 35.3
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 2.4e-62 244.6 723 35.1
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 7.0e-62 243.0 724 34.5
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 7.0e-62 243.0 762 33.5
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 1.2e-61 242.3 722 34.5
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 3.4e-61 240.7 761 35.3
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 4.5e-61 240.4 733 33.8
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 1.0e-60 239.2 815 35.2
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 1.7e-60 238.4 613 37.5
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 1.7e-60 238.4 603 37.6
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 1.4e-59 235.3 748 35.6
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 4.2e-59 233.8 814 34.3
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 5.5e-59 233.4 781 32.5
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 1.6e-58 231.9 665 31.9
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 2.7e-58 231.1 752 34.0
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 3.6e-58 230.7 761 33.9
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 2.0e-56 224.9 781 34.4
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 2.6e-56 224.6 782 33.6
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 3.3e-56 224.2 782 32.6
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 4.4e-56 223.8 747 35.2
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 5.7e-56 223.4 723 34.9
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 1.1e-54 219.2 626 35.8
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 2.4e-54 218.0 666 37.1
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 3.1e-54 217.6 787 34.7
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 1.2e-53 215.7 734 31.9
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 2.6e-53 214.5 720 36.4
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 7.7e-53 213.0 751 34.0
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 1.3e-52 212.2 630 34.8
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 1.1e-51 209.1 687 34.5
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 1.9e-51 208.4 784 33.9
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 2.5e-51 208.0 728 33.2
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 7.2e-51 206.5 663 32.1
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 3.6e-50 204.1 741 31.7
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 4.7e-50 203.8 692 32.7
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 6.3e-47 193.4 797 32.4
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 7.0e-46 189.9 732 31.1
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 5.5e-43 180.3 713 30.9
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.4e-41 175.6 718 31.1
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 1.3e-39 169.1 785 29.6
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 1.1e-38 166.0 761 32.1
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 7.0e-38 163.3 742 31.3
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 9.1e-38 162.9 763 29.1
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 2.7e-37 161.4 291 43.6
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 1.1e-35 156.0 738 30.8
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 2.1e-34 151.8 771 28.5
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 3.6e-34 151.0 662 30.8
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 6.8e-33 146.7 698 30.4
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 9.8e-32 142.9 646 30.8
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.3e-31 142.5 762 30.7
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 2.4e-30 138.3 755 30.1
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 2.4e-30 138.3 160 50.6
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 9.2e-30 136.3 691 28.7
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 7.8e-29 133.3 655 30.1
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 1.2e-26 125.9 761 28.6
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 8.0e-26 123.2 290 42.4
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 1.3e-23 115.9 188 52.7
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 1.7e-23 115.5 737 27.7
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 2.9e-23 114.8 570 30.2
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 6.0e-21 107.1 819 28.8
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 1.0e-20 106.3 791 26.3
unitig_22.g5225 Utricularia gibba HOM05D003765 ORTHO05D004561 1.0e-20 106.3 621 24.6
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 6.6e-20 103.6 399 33.6
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 1.1e-19 102.8 543 29.3
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 3.3e-19 101.3 394 33.0
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 3.3e-19 101.3 572 30.2
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 2.3e-17 95.1 236 35.6
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 4.0e-17 94.4 402 32.6
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 8.3e-15 86.7 398 30.7
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 1.1e-14 86.3 170 41.8
SEGI_17592 Sequoiadendron giganteum HOM05D003765 ORTHO05D004561 1.1e-14 86.3 181 30.9
VMungo0251G2630 Vigna mungo HOM05D003765 ORTHO05D004561 3.2e-14 84.7 102 55.9
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 4.1e-14 84.3 398 30.4
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 7.8e-13 80.1 215 32.1
VMungo0100G0003 Vigna mungo HOM05D003765 ORTHO05D004561 1.3e-12 79.3 117 48.7
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 5.1e-12 77.4 698 27.2
Sed0026899 Sechium edule HOM05D003765 ORTHO05D004561 1.1e-11 76.3 650 24.5
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 2.1e-10 72.0 340 28.5
BcaC04g23427 Brassica carinata HOM05D003765 ORTHO05D004561 4.7e-10 70.9 178 38.8
C09p08430 Brassica napus HOM05D003765 ORTHO05D004561 1.1e-09 69.7 340 31.5
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.8e-09 68.9 329 31.0
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 4.0e-09 67.8 822 26.4
BolC9t53753H Brassica oleracea HOM05D003765 ORTHO05D004561 3.4e-08 64.7 260 32.3
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 4.4e-08 64.3 464 27.6
HPP92_022139 Vanilla planifolia HOM05D003765 ORTHO05D004561 4.4e-08 64.3 676 24.0
FAN21G0377 Fragaria x ananassa HOM05D002515 ORTHO05D006653 5.8e-08 63.9 176 26.7
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 1.3e-07 62.8 329 28.6
FAN25G0844 Fragaria x ananassa HOM05D002515 ORTHO05D002722 2.2e-07 62.0 180 26.1
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 2.9e-07 61.6 335 29.6
Carub.0007s1558 Capsella rubella HOM05D003765 ORTHO05D004561 3.7e-07 61.2 249 34.9
Os04g0106500 Oryza sativa ssp. japonica HOM05D003765 ORTHO05D004561 8.3e-07 60.1 620 24.2
HPP92_022144 Vanilla planifolia HOM05D003765 ORTHO05D004561 1.1e-06 59.7 670 22.8
A09p07540 Brassica napus HOM05D003765 ORTHO05D004561 7.1e-06 57.0 453 25.6
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 7.1e-06 57.0 335 30.7
Mapoly0151s0019 Marchantia polymorpha HOM05D002515 ORTHO05D002722 9.2e-06 56.6 187 24.1


User provided reference genes

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