Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.6e-132 476.1 233 100.0
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 1.4e-120 436.4 233 89.3
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 3.0e-120 435.3 233 88.8
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 3.7e-118 428.3 236 88.1
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.2e-116 423.3 234 89.7
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 1.2e-116 423.3 236 86.4
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 2.7e-108 395.6 196 98.0
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 3.2e-101 372.1 233 76.8
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 9.2e-101 370.5 233 75.1
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.5e-98 363.2 234 74.8
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 5.6e-98 361.3 234 74.8
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 9.5e-98 360.5 235 77.0
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.6e-97 359.8 234 74.4
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 2.1e-97 359.4 234 73.5
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.8e-97 359.0 234 74.8
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 3.6e-97 358.6 233 73.8
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.4e-96 356.7 235 73.2
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.4e-96 356.7 234 74.4
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.8e-96 356.3 233 74.7
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.0e-96 355.1 234 73.9
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 4.0e-96 355.1 234 74.4
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 5.2e-96 354.8 231 74.9
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 6.8e-96 354.4 234 73.5
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 1.5e-95 353.2 243 71.6
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 1.5e-95 353.2 234 74.4
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 2.0e-95 352.8 232 74.1
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.6e-95 352.4 229 73.4
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 2.6e-95 352.4 235 72.3
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 2.6e-95 352.4 234 75.6
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.4e-95 351.7 238 73.1
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 7.5e-95 350.9 234 73.1
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 7.5e-95 350.9 234 72.2
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 7.5e-95 350.9 233 71.7
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.3e-94 350.1 235 74.0
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 1.3e-94 350.1 237 72.2
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 1.3e-94 350.1 234 73.5
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.2e-94 349.4 238 72.7
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 4.9e-94 348.2 237 72.2
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 1.4e-93 346.7 230 72.6
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.4e-93 346.7 234 70.9
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.4e-93 345.9 216 77.3
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 3.2e-93 345.5 234 73.1
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 3.2e-93 345.5 232 73.3
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 4.1e-93 345.1 235 73.2
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 5.4e-93 344.7 233 71.7
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 7.0e-93 344.4 236 71.2
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 9.2e-93 344.0 237 71.7
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.6e-92 343.2 226 73.0
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 2.7e-92 342.4 232 71.6
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.7e-92 342.4 226 73.0
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 3.5e-92 342.0 221 73.3
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 7.8e-92 340.9 237 70.5
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 2.3e-91 339.3 237 71.3
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 3.9e-91 338.6 229 70.7
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 5.0e-91 338.2 239 70.7
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 6.6e-91 337.8 210 78.1
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 8.6e-91 337.4 216 75.5
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.1e-90 337.0 226 72.1
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.5e-90 336.7 216 75.9
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.9e-90 336.3 246 67.9
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 1.9e-90 336.3 231 71.4
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 5.6e-90 334.7 230 71.3
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 7.3e-90 334.3 236 69.9
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 7.3e-90 334.3 235 70.2
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 9.5e-90 334.0 221 70.6
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 9.5e-90 334.0 239 69.5
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 2.8e-89 332.4 303 58.7
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 6.2e-89 331.3 235 68.9
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 2.3e-88 329.3 238 68.1
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 2.3e-88 329.3 235 68.5
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 3.1e-88 328.9 233 67.0
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 5.2e-88 328.2 230 69.1
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 8.9e-88 327.4 196 81.1
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 1.5e-87 326.6 233 68.7
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 1.5e-87 326.6 235 68.1
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 1.5e-87 326.6 220 71.8
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.4e-87 325.1 244 66.4
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 5.8e-87 324.7 208 74.5
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 2.4e-85 319.3 219 69.9
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 7.1e-85 317.8 194 78.9
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 1.2e-84 317.0 219 70.8
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 1.3e-83 313.5 219 68.9
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 3.0e-83 312.4 233 67.0
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 8.6e-83 310.8 220 69.1
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 1.1e-82 310.5 221 67.9
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 1.1e-82 310.5 221 67.9
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 1.1e-82 310.5 221 67.9
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 1.1e-82 310.5 238 64.7
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.5e-82 310.1 196 76.5
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 2.5e-82 309.3 225 67.6
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 4.3e-82 308.5 235 63.8
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 2.1e-81 306.2 219 68.9
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 2.8e-81 305.8 223 66.4
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 2.8e-81 305.8 223 66.4
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 2.3e-80 302.8 230 61.3
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.3e-80 302.8 237 64.6
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 9.9e-79 297.4 223 65.5
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 3.8e-78 295.4 236 63.6
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 4.1e-77 292.0 205 69.3
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 4.6e-76 288.5 216 64.8
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 4.3e-74 282.0 239 58.6
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 7.3e-74 281.2 195 66.2
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.2e-73 280.4 197 68.0
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 8.9e-72 274.2 187 70.6
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 8.4e-70 267.7 198 67.7
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 1.9e-66 256.5 217 58.5
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.8e-64 250.0 211 61.6
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 2.6e-63 246.1 219 55.3
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 5.8e-63 245.0 262 53.4
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 4.2e-61 238.8 184 65.2
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 1.6e-57 226.9 183 60.1
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.8e-57 226.1 142 74.6
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 8.1e-57 224.6 202 56.4
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 1.3e-54 217.2 232 49.1
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 1.2e-52 210.7 141 72.3
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 5.1e-51 205.3 194 53.1
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 9.6e-50 201.1 128 73.4
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 3.7e-33 146.0 185 42.2
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 5.0e-30 135.6 207 42.0
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.0e-23 113.6 89 62.9
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.0e-23 113.6 276 31.9
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 5.0e-22 109.0 202 37.6
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 1.9e-21 107.1 164 40.9
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.5e-13 80.1 49 73.5
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 5.5e-13 79.0 49 71.4
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 7.2e-13 78.6 61 59.0
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 2.4e-08 63.5 34 79.4
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 5.9e-07 58.9 157 30.6


User provided reference genes

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