Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004910g0030 Nicotiana tabacum HOM05D007232 ORTHO05D000652 3.0e-60 235.0 117 100.0
Nitab4.5_0000715g0080 Nicotiana tabacum HOM05D007232 ORTHO05D000652 4.5e-56 221.1 117 93.2
Peaxi162Scf00295g00092 Petunia axillaris HOM05D007232 ORTHO05D000652 2.7e-48 195.3 117 81.2
PGSC0003DMG400021819 Solanum tuberosum HOM05D007232 ORTHO05D000652 1.1e-38 163.3 118 68.6
Solyc05g051890.1 Solanum lycopersicum HOM05D007232 ORTHO05D000652 4.2e-38 161.4 118 69.5
Sopen05g030420 Solanum pennellii HOM05D007232 ORTHO05D000652 1.6e-37 159.5 118 68.6
CAN.G383.12 Capsicum annuum HOM05D007232 ORTHO05D000652 7.0e-33 144.1 118 66.1
Peaxi162Scf01263g00012 Petunia axillaris HOM05D007232 ORTHO05D000652 1.2e-32 143.3 117 62.4
Nitab4.5_0000104g0220 Nicotiana tabacum HOM05D007232 ORTHO05D000652 7.8e-32 140.6 118 62.7
Nitab4.5_0002378g0010 Nicotiana tabacum HOM05D007232 ORTHO05D000652 1.3e-31 139.8 111 64.9
CAN.G725.2 Capsicum annuum HOM05D007232 ORTHO05D000652 1.9e-30 136.0 117 60.7
PGSC0003DMG400020617 Solanum tuberosum HOM05D007232 ORTHO05D000652 5.8e-27 124.4 117 56.4
Sopen04g024800 Solanum pennellii HOM05D007232 ORTHO05D000652 9.8e-27 123.6 117 56.4
Solyc04g054960.1 Solanum lycopersicum HOM05D007232 ORTHO05D000652 4.9e-26 121.3 117 54.7
Rhsim10G0159300 Rhododendron simsii HOM05D007232 ORTHO05D000652 6.0e-16 87.8 119 44.5
Oeu039751.1 Olea europaea HOM05D007232 ORTHO05D000652 1.3e-15 86.7 118 44.1
CSS0050475 Camellia sinensis var. sinensis HOM05D007232 ORTHO05D000652 1.5e-14 83.2 111 43.2
Oeu056593.1 Olea europaea HOM05D007232 ORTHO05D000652 3.6e-13 78.6 118 43.2
Hma1.2p1_0308F.1_g120090 Hydrangea macrophylla HOM05D007232 ORTHO05D000652 8.9e-12 73.9 111 39.6
Potri.005G077100 Populus trichocarpa HOM05D007232 ORTHO05D000652 7.5e-11 70.9 111 34.2
MD15G1326600 Malus domestica HOM05D007232 ORTHO05D000652 1.3e-10 70.1 112 38.4
Sabra05G0063500 Salix brachista HOM05D007232 ORTHO05D000652 1.3e-10 70.1 113 35.4
MD01G1027300 Malus domestica HOM05D007232 ORTHO05D000652 3.7e-10 68.6 112 37.5
Thhalv10000276m.g Eutrema salsugineum HOM05D007232 ORTHO05D000652 4.9e-10 68.2 119 33.6
Sabra07G0074600 Salix brachista HOM05D007232 ORTHO05D000652 6.4e-10 67.8 118 33.1
Prupe.6G182500 Prunus persica HOM05D007232 ORTHO05D000652 1.4e-09 66.6 108 35.2
A04p16690 Brassica napus HOM05D007232 ORTHO05D000652 5.4e-09 64.7 119 31.1
BraA04t17302Z Brassica rapa HOM05D007232 ORTHO05D000652 5.4e-09 64.7 119 31.1
AUR62019200 Chenopodium quinoa HOM05D007232 ORTHO05D000652 5.4e-09 64.7 116 29.3
Aqoxy4G02373 Aquilegia oxysepala HOM05D000973 ORTHO05D000652 7.1e-09 64.3 116 34.5
BcaC02g08732 Brassica carinata HOM05D007232 ORTHO05D000652 7.1e-09 64.3 119 31.1
C04p51230 Brassica napus HOM05D007232 ORTHO05D000652 7.1e-09 64.3 119 31.1
BolC4t26712H Brassica oleracea HOM05D007232 ORTHO05D000652 7.1e-09 64.3 119 31.1
AUR62000030 Chenopodium quinoa HOM05D007232 ORTHO05D000652 9.2e-09 63.9 115 30.4
BcaC02g08684 Brassica carinata HOM05D007232 ORTHO05D000652 1.6e-08 63.2 118 30.5
QL12p036377 Quercus lobata HOM05D007232 ORTHO05D000652 1.6e-08 63.2 119 33.6
Sp4g01240 Schrenkiella parvula HOM05D007232 ORTHO05D000652 2.7e-08 62.4 119 29.4
AT2G22180 Arabidopsis thaliana HOM05D007232 ORTHO05D000652 4.6e-08 61.6 118 29.7
Cfa002682 Carpinus fangiana HOM05D000973 ORTHO05D000652 4.6e-08 61.6 109 34.9
BcaB08g35048 Brassica carinata HOM05D007232 ORTHO05D000652 2.3e-07 59.3 118 28.0
Carub.0004s0134 Capsella rubella HOM05D007232 ORTHO05D000652 3.0e-07 58.9 118 29.7
Aa31LG7G14550 Aethionema arabicum HOM05D007232 ORTHO05D000652 5.1e-07 58.2 118 30.5
PSO781G0167 Papaver somniferum HOM05D000973 ORTHO05D000652 3.3e-06 55.5 119 29.4
PGR042G3281 Punica granatum HOM05D000973 ORTHO05D000652 4.3e-06 55.1 107 29.0
THA.LOC104807704 Tarenaya hassleriana HOM05D007232 ORTHO05D000652 7.3e-06 54.3 106 31.1
Hma1.2p1_0237F.1_g099320 Hydrangea macrophylla HOM05D000973 ORTHO05D000652 9.5e-06 53.9 110 29.1
Hma1.2p1_1783F.1_g302128 Hydrangea macrophylla HOM05D000973 ORTHO05D000652 9.5e-06 53.9 110 29.1


User provided reference genes

Program Settings