Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 2.6e-80 302.0 150 100.0
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 9.8e-80 300.1 150 98.7
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 9.2e-78 293.5 150 96.0
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 1.6e-77 292.7 150 95.3
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 3.9e-76 288.1 150 94.7
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 1.2e-69 266.5 150 89.3
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.7e-68 262.7 154 84.4
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 2.3e-68 262.3 154 84.4
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 6.6e-68 260.8 150 84.7
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.1e-67 260.0 154 85.1
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.9e-67 259.2 154 82.5
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.9e-67 259.2 154 82.5
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 3.3e-67 258.5 154 83.8
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 3.3e-67 258.5 158 82.3
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 4.3e-67 258.1 149 85.9
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 4.3e-67 258.1 149 85.9
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 4.3e-67 258.1 149 85.9
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 5.6e-67 257.7 154 81.8
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 5.6e-67 257.7 150 84.7
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 9.5e-67 256.9 153 82.4
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.6e-66 256.1 149 85.2
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 1.6e-66 256.1 155 81.9
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 1.6e-66 256.1 154 81.8
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 1.6e-66 256.1 155 81.9
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 2.8e-66 255.4 154 83.1
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 2.8e-66 255.4 154 83.1
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 3.6e-66 255.0 154 79.9
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 3.6e-66 255.0 149 84.6
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 6.2e-66 254.2 180 75.0
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 6.2e-66 254.2 150 82.7
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 6.2e-66 254.2 154 79.9
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 8.1e-66 253.8 154 80.5
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 1.1e-65 253.4 153 81.0
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 1.1e-65 253.4 153 81.0
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 1.4e-65 253.1 154 79.9
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 2.3e-65 252.3 152 80.9
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 2.3e-65 252.3 155 81.3
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 2.3e-65 252.3 149 83.9
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 3.1e-65 251.9 157 81.5
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 4.0e-65 251.5 156 80.1
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 4.0e-65 251.5 154 79.9
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 6.8e-65 250.8 152 80.9
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 6.8e-65 250.8 157 81.5
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.2e-64 250.0 150 80.7
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 1.5e-64 249.6 150 82.0
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 2.0e-64 249.2 149 81.9
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 2.6e-64 248.8 152 80.3
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 2.6e-64 248.8 154 80.5
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 4.4e-64 248.1 155 79.4
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 9.9e-64 246.9 154 81.8
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 1.7e-63 246.1 149 81.9
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 2.2e-63 245.7 153 81.7
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.9e-63 245.4 154 77.3
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 2.9e-63 245.4 154 77.3
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 3.7e-63 245.0 150 83.3
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 3.7e-63 245.0 150 81.3
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 6.4e-63 244.2 153 78.4
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 6.4e-63 244.2 154 78.6
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 8.3e-63 243.8 149 80.5
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 1.4e-62 243.0 150 78.0
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 9.2e-62 240.4 150 79.3
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 3.5e-61 238.4 150 78.0
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 1.0e-60 236.9 152 77.0
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.3e-60 236.5 152 80.9
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.7e-60 236.1 153 75.8
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 2.3e-60 235.7 152 77.0
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 2.3e-60 235.7 156 77.6
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 6.6e-60 234.2 154 73.4
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 3.3e-59 231.9 150 76.0
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 3.3e-59 231.9 150 75.3
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 4.3e-59 231.5 150 78.7
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.6e-59 231.1 149 75.2
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 5.6e-59 231.1 154 76.0
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 1.6e-58 229.6 154 75.3
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.4e-57 226.5 154 72.1
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 2.4e-57 225.7 146 76.7
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 1.5e-56 223.0 146 74.0
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 5.8e-56 221.1 149 72.5
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 5.8e-56 221.1 150 75.3
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.7e-55 219.5 150 74.7
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 2.2e-55 219.2 146 74.0
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 2.9e-55 218.8 146 74.0
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 8.4e-55 217.2 146 74.0
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 8.4e-55 217.2 150 74.0
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 1.4e-54 216.5 152 70.4
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 1.9e-54 216.1 146 73.3
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 3.2e-54 215.3 146 73.3
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 7.1e-54 214.2 146 73.3
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 7.1e-54 214.2 146 73.3
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 9.2e-54 213.8 146 72.6
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 2.7e-53 212.2 151 73.5
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 1.0e-52 210.3 146 70.5
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.3e-52 209.1 133 82.7
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 1.1e-51 206.8 146 69.2
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.6e-50 203.0 129 77.5
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.1e-49 200.3 150 68.0
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 3.8e-47 191.8 160 61.9
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 1.3e-44 183.3 147 65.3
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 3.0e-44 182.2 111 79.3
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 2.1e-42 176.0 107 80.4
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.4e-38 162.5 156 59.0
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 2.1e-37 159.5 180 48.9
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 2.8e-34 149.1 159 53.5
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 4.2e-30 135.2 77 83.1
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 4.3e-27 125.2 78 75.6
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 4.5e-24 115.2 75 74.7
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 4.9e-23 111.7 96 62.5
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 3.5e-21 105.5 79 67.1
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.1e-17 94.0 51 82.4
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 7.6e-16 87.8 45 91.1
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 2.9e-15 85.9 88 50.0
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 3.3e-11 72.4 182 31.9
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 2.6e-08 62.8 43 76.7
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.9e-07 59.3 61 54.1
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 7.2e-06 54.7 34 76.5


User provided reference genes

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