Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004899g0090 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.3e-34 148.3 73 100.0
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.7e-27 124.8 83 77.1
Nitab4.5_0003887g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.7e-27 124.0 82 76.8
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.8e-26 122.1 82 74.4
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.0e-26 121.3 82 76.8
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-25 118.6 82 73.2
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.4e-25 117.9 82 74.4
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.4e-25 117.5 82 74.4
Nitab4.5_0006001g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-24 115.9 81 74.1
Nitab4.5_0001896g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.2e-24 115.2 82 68.3
Nitab4.5_0001927g0100 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.7e-24 114.4 80 73.8
Nitab4.5_0000829g0120 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.1e-23 111.3 79 70.9
Nitab4.5_0001173g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.1e-23 111.3 82 72.0
Nitab4.5_0012299g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.1e-23 111.3 82 69.5
Nitab4.5_0013596g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.7e-22 108.2 72 76.4
Nitab4.5_0002944g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-21 104.8 82 64.6
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-21 104.8 72 76.4
Nitab4.5_0002072g0090 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-19 99.4 72 70.8
Nitab4.5_0008534g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.8e-19 98.2 75 69.3
Nitab4.5_0000571g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.6e-19 97.8 66 77.3
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.7e-19 97.4 70 72.9
Nitab4.5_0001663g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.9e-18 93.2 70 70.0
Nitab4.5_0012202g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.0e-17 92.0 71 69.0
Nitab4.5_0011961g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-17 91.7 74 68.9
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.4e-17 90.9 71 69.0
Nitab4.5_0007303g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.4e-17 90.9 67 71.6
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.7e-16 87.8 68 72.1
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.4e-15 85.1 63 69.8
Nitab4.5_0002297g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-14 82.4 64 67.2
Nitab4.5_0002661g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.7e-14 81.6 63 65.1
Nitab4.5_0004118g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.7e-14 81.6 72 56.9
Nitab4.5_0000377g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.5e-14 81.3 63 66.7
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 5.9e-14 80.5 81 49.4
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 5.9e-14 80.5 81 49.4
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 5.9e-14 80.5 81 49.4
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.8e-14 80.1 81 51.9
Nitab4.5_0007137g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-13 79.7 56 71.4
Nitab4.5_0000584g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-13 79.3 64 67.2
Nitab4.5_0000890g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.3e-13 78.6 66 65.2
Nitab4.5_0002338g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.3e-13 78.6 62 66.1
Nitab4.5_0003079g0080 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-13 78.2 64 64.1
Nitab4.5_0005016g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-13 78.2 63 66.7
CAN.G1169.9 Capsicum annuum HOM05D005063 ORTHO05D000482 3.9e-13 77.8 81 50.6
Nitab4.5_0000326g0300 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.9e-13 77.8 81 49.4
Nitab4.5_0019527g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.6e-13 77.0 62 64.5
Nitab4.5_0000102g0280 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.6e-13 76.6 63 63.5
Nitab4.5_0002806g0010 Nicotiana tabacum HOM05D005063 ORTHO05D005463 1.9e-12 75.5 64 64.1
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 1.9e-12 75.5 82 46.3
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.5e-12 75.1 81 45.7
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 3.3e-12 74.7 82 46.3
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 5.6e-12 73.9 82 45.1
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 7.3e-12 73.6 82 45.1
Nitab4.5_0000036g0380 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.0e-11 70.1 45 77.8
Nitab4.5_0005705g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-10 68.9 80 45.0
Nitab4.5_0000227g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.3e-10 68.6 80 47.5
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.3e-10 68.6 81 46.9
Nitab4.5_0010313g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.6e-09 65.1 80 45.0
Nitab4.5_0001725g0070 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.4e-09 64.3 81 40.7
Nitab4.5_0000697g0240 Nicotiana tabacum HOM05D005063 ORTHO05D010498 5.8e-09 63.9 32 87.5
Nitab4.5_0000730g0160 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.8e-09 63.9 43 74.4
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.7e-08 62.4 81 40.7
Nitab4.5_0000453g0080 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.2e-08 62.0 74 41.9
Nitab4.5_0000832g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.2e-08 62.0 80 37.5
Nitab4.5_0000008g0750 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.7e-08 61.2 59 57.6
Nitab4.5_0000113g0280 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-07 59.3 70 45.7
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.4e-07 58.5 81 37.0
Nitab4.5_0004958g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.4e-07 58.5 78 39.7
Nitab4.5_0013466g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.4e-07 58.5 80 36.2
Nitab4.5_0001928g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.2e-07 58.2 80 38.8
Nitab4.5_0000078g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.1e-07 57.8 79 38.0
Nitab4.5_0000576g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.1e-07 57.8 70 37.1
Nitab4.5_0001230g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.1e-07 57.8 81 37.0
Nitab4.5_0001317g0140 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.1e-07 57.8 81 35.8
Nitab4.5_0009150g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.1e-07 57.8 79 39.2
Nitab4.5_0000252g0250 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.4e-07 57.4 81 38.3
Nitab4.5_0002098g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 5.4e-07 57.4 32 84.4
Nitab4.5_0013791g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.4e-07 57.4 80 37.5
Nitab4.5_0001131g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.0e-07 57.0 80 37.5
Nitab4.5_0004040g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.0e-07 57.0 80 37.5
Nitab4.5_0006446g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.0e-07 57.0 80 37.5
Nitab4.5_0007528g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.0e-07 57.0 81 38.3
Nitab4.5_0004066g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.2e-07 56.6 80 35.0
Nitab4.5_0000634g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.2e-06 56.2 86 33.7
Nitab4.5_0001843g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.6e-06 55.8 79 36.7
Nitab4.5_0004159g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.6e-06 55.8 80 36.2
Nitab4.5_0017301g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.6e-06 55.8 69 42.0
Nitab4.5_0001170g0260 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.0e-06 55.5 69 43.5
Nitab4.5_0001473g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.0e-06 55.5 80 33.8
Nitab4.5_0002848g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.0e-06 55.5 80 35.0
Nitab4.5_0010873g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.0e-06 55.5 80 36.2
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 2.7e-06 55.1 80 40.0
Nitab4.5_0000677g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.7e-06 55.1 70 35.7
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.7e-06 55.1 80 35.0
Nitab4.5_0002908g0130 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.5e-06 54.7 80 35.0
Nitab4.5_0007069g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.5e-06 54.7 80 36.2
Nitab4.5_0009026g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.5e-06 54.7 80 35.0
Nitab4.5_0002948g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.6e-06 54.3 79 36.7
Nitab4.5_0003021g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.6e-06 54.3 79 34.2
Nitab4.5_0009286g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.6e-06 54.3 80 35.0
Nitab4.5_0011458g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.6e-06 54.3 80 35.0
Nitab4.5_0001057g0210 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.0e-06 53.9 76 34.2
Nitab4.5_0001082g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.8e-06 53.5 80 36.2


User provided reference genes

Program Settings