Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004893g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.2e-80 303.1 156 100.0
Nitab4.5_0006042g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.1e-25 120.6 121 57.0
Nitab4.5_0005621g0130 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.1e-22 110.5 121 51.2
Nitab4.5_0005621g0230 Nicotiana tabacum HOM05D000111 ORTHO05D001334 9.1e-20 100.9 115 48.7
Nitab4.5_0002270g0030 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.5e-19 100.1 121 47.1
Sopen08g029340 Solanum pennellii HOM05D000111 ORTHO05D001334 2.6e-19 99.4 121 46.3
Peaxi162Scf00119g00418 Petunia axillaris HOM05D000111 ORTHO05D001334 3.5e-19 99.0 121 47.1
Peaxi162Scf01062g00004 Petunia axillaris HOM05D000111 ORTHO05D001334 3.5e-19 99.0 114 46.5
Peaxi162Scf00935g00035 Petunia axillaris HOM05D000111 ORTHO05D001334 5.9e-19 98.2 114 48.2
Peaxi162Scf00015g01213 Petunia axillaris HOM05D000111 ORTHO05D001334 1.7e-18 96.7 121 46.3
Solyc07g056708.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.7e-18 96.7 115 45.2
Nitab4.5_0010546g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.2e-18 96.3 121 44.6
Peaxi162Scf00160g00040 Petunia axillaris HOM05D000111 ORTHO05D001334 2.2e-18 96.3 112 50.9
Solyc07g056610.2 Solanum lycopersicum HOM05D000111 ORTHO05D001334 2.2e-18 96.3 125 44.0
Nitab4.5_0005621g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 8.5e-18 94.4 109 48.6
Peaxi162Scf00002g01318 Petunia axillaris HOM05D000111 ORTHO05D001334 1.4e-17 93.6 116 45.7
Peaxi162Scf00812g00056 Petunia axillaris HOM05D000111 ORTHO05D001334 1.4e-17 93.6 111 44.1
Peaxi162Scf01333g00015 Petunia axillaris HOM05D000111 ORTHO05D001334 1.9e-17 93.2 116 47.4
Nitab4.5_0005621g0220 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.2e-17 92.4 115 44.3
Peaxi162Scf00002g01321 Petunia axillaris HOM05D000111 ORTHO05D001334 4.2e-17 92.0 116 45.7
Peaxi162Scf00002g01413 Petunia axillaris HOM05D000111 ORTHO05D001334 4.2e-17 92.0 116 44.8
Solyc08g080820.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 4.2e-17 92.0 115 43.5
Solyc08g080810.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 5.5e-17 91.7 125 43.2
Solyc07g056704.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 7.2e-17 91.3 114 43.0
Solyc07g056705.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 7.2e-17 91.3 114 43.0
Solyc08g080790.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 7.2e-17 91.3 115 43.5
Peaxi162Scf01409g00018 Petunia axillaris HOM05D000111 ORTHO05D001334 1.6e-16 90.1 111 45.9
Nitab4.5_0001356g0120 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.7e-16 89.4 99 49.5
Peaxi162Scf00119g00315 Petunia axillaris HOM05D000111 ORTHO05D001334 2.7e-16 89.4 115 44.3
Peaxi162Scf00302g01424 Petunia axillaris HOM05D000111 ORTHO05D001334 2.7e-16 89.4 109 45.0
Nitab4.5_0005621g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 4.7e-16 88.6 134 42.5
Nitab4.5_0000612g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 6.1e-16 88.2 111 45.0
Nitab4.5_0002908g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 6.1e-16 88.2 122 37.7
Solyc08g080745.2 Solanum lycopersicum HOM05D000111 ORTHO05D001334 6.1e-16 88.2 107 43.9
Sopen08g029060 Solanum pennellii HOM05D000111 ORTHO05D001334 8.0e-16 87.8 109 45.0
Peaxi162Scf00119g00316 Petunia axillaris HOM05D000111 ORTHO05D001334 1.4e-15 87.0 130 41.5
Sopen08g023480 Solanum pennellii HOM05D000111 ORTHO05D001334 1.4e-15 87.0 116 40.5
Nitab4.5_0000419g0040 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.8e-15 86.7 109 45.0
Nitab4.5_0000395g0040 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.3e-15 86.3 123 43.1
Solyc08g080800.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 2.3e-15 86.3 115 41.7
Nitab4.5_0003154g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.1e-14 84.0 112 42.9
Nitab4.5_0006136g0030 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.1e-14 84.0 127 39.4
Peaxi162Scf00792g00019 Petunia axillaris HOM05D000111 ORTHO05D001334 2.0e-14 83.2 111 41.4
Solyc08g074870.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 2.0e-14 83.2 113 40.7
Nitab4.5_0028496g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.6e-14 82.8 120 45.0
Peaxi162Scf00418g01020 Petunia axillaris HOM05D000111 ORTHO05D001334 2.6e-14 82.8 115 39.1
Solyc09g098480.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 2.6e-14 82.8 122 41.0
Nitab4.5_0002331g0040 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.3e-14 82.4 128 40.6
Nitab4.5_0002908g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 9.7e-14 80.9 121 39.7
Ah.02g116760 Amaranthus hybridus HOM05D000111 ORTHO05D001334 1.3e-13 80.5 109 44.0
Nitab4.5_0005621g0160 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.2e-13 79.7 102 41.2
PGSC0003DMG400040721 Solanum tuberosum HOM05D000111 ORTHO05D001334 2.2e-13 79.7 111 42.3
Peaxi162Scf00822g00048 Petunia axillaris HOM05D000111 ORTHO05D001334 2.8e-13 79.3 111 41.4
Nitab4.5_0000333g0050 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.7e-13 79.0 122 38.5
Peaxi162Scf00517g10028 Petunia axillaris HOM05D000111 ORTHO05D001334 3.7e-13 79.0 109 41.3
GSVIVG01019801001 Vitis vinifera HOM05D000111 ORTHO05D001334 6.3e-13 78.2 109 45.0
Peaxi162Scf00288g01312 Petunia axillaris HOM05D000111 ORTHO05D001334 1.4e-12 77.0 111 40.5
Rhsim02G0221400 Rhododendron simsii HOM05D000111 ORTHO05D001334 1.4e-12 77.0 116 39.7
Rhsim02G0222000 Rhododendron simsii HOM05D000111 ORTHO05D001334 1.4e-12 77.0 110 40.9
Peaxi162Scf00213g00018 Petunia axillaris HOM05D000111 ORTHO05D001334 1.8e-12 76.6 111 40.5
Peaxi162Scf00288g00311 Petunia axillaris HOM05D000111 ORTHO05D001334 2.4e-12 76.3 111 39.6
Sopen08g029120 Solanum pennellii HOM05D000111 ORTHO05D001334 2.4e-12 76.3 101 40.6
Sopen08g029140 Solanum pennellii HOM05D000111 ORTHO05D001334 2.4e-12 76.3 92 44.6
Actinidia14541 Actinidia chinensis HOM05D000111 ORTHO05D001334 3.1e-12 75.9 110 40.0
Solyc08g080700.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 3.1e-12 75.9 111 36.9
vmacro11297 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 3.1e-12 75.9 103 39.8
Nitab4.5_0002908g0060 Nicotiana tabacum HOM05D000111 ORTHO05D001334 5.3e-12 75.1 115 39.1
Nitab4.5_0006136g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.2e-11 73.9 112 37.5
Nitab4.5_0005723g0010 Nicotiana tabacum HOM05D004661 ORTHO05D005827 3.5e-11 72.4 104 39.4
Sopen08g029010 Solanum pennellii HOM05D000111 ORTHO05D001334 4.5e-11 72.0 97 39.2
PGSC0003DMG400014762 Solanum tuberosum HOM05D000111 ORTHO05D001334 4.5e-11 72.0 105 39.0
PGSC0003DMG400029577 Solanum tuberosum HOM05D000111 ORTHO05D001334 4.5e-11 72.0 109 37.6
vmacro08569 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 1.0e-10 70.9 107 40.2
Nitab4.5_0010198g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.3e-10 70.5 112 36.6
Peaxi162Scf00288g00018 Petunia axillaris HOM05D000111 ORTHO05D001334 2.2e-10 69.7 111 37.8
Peaxi162Scf00714g00123 Petunia axillaris HOM05D000111 ORTHO05D001334 2.2e-10 69.7 122 34.4
Rhsim02G0222700 Rhododendron simsii HOM05D000111 ORTHO05D001334 3.8e-10 68.9 113 38.1
Sopen08g022610 Solanum pennellii HOM05D000111 ORTHO05D001334 5.0e-10 68.6 102 38.2
TWI81G0621 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 5.0e-10 68.6 139 33.1
Ah.12g057490 Amaranthus hybridus HOM05D000111 ORTHO05D001334 8.5e-10 67.8 109 37.6
vmacro08567 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 1.1e-09 67.4 97 39.2
Sp6g05770 Schrenkiella parvula HOM05D000111 ORTHO05D001334 2.5e-09 66.2 93 37.6
AL8G35290 Arabidopsis lyrata HOM05D000111 ORTHO05D001334 3.2e-09 65.9 97 38.1
Rhsim02G0221800 Rhododendron simsii HOM05D000111 ORTHO05D001334 3.2e-09 65.9 105 36.2
TWI81G0559 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 3.2e-09 65.9 112 37.5
TAR375G0416 Trochodendron aralioides HOM05D000111 ORTHO05D001334 3.2e-09 65.9 109 37.6
vmacro11291 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 3.2e-09 65.9 115 38.3
vmacro22621 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 3.2e-09 65.9 97 38.1
Nitab4.5_0001356g0200 Nicotiana tabacum HOM05D000111 ORTHO05D001334 4.2e-09 65.5 106 41.5
Sp6g05760 Schrenkiella parvula HOM05D000111 ORTHO05D001334 4.2e-09 65.5 113 34.5
Hund11492 Selenicereus undatus HOM05D000111 ORTHO05D001334 4.2e-09 65.5 122 32.8
Nitab4.5_0000033g0280 Nicotiana tabacum HOM05D000111 ORTHO05D001334 5.5e-09 65.1 112 36.6
vmacro11288 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 5.5e-09 65.1 115 39.1
vmacro11294 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 5.5e-09 65.1 110 36.4
PGR042G0776 Punica granatum HOM05D000111 ORTHO05D001334 7.2e-09 64.7 98 38.8
Rhsim02G0222200 Rhododendron simsii HOM05D000111 ORTHO05D001334 7.2e-09 64.7 113 36.3
THA.LOC104825020 Tarenaya hassleriana HOM05D000111 ORTHO05D001334 7.2e-09 64.7 121 37.2
TWI81G0783 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 7.2e-09 64.7 113 36.3
PSO017G4222 Papaver somniferum HOM05D000111 ORTHO05D001475 9.4e-09 64.3 111 34.2
TWI81G0101 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 9.4e-09 64.3 112 35.7
CANSAT80G0255 Cannabis sativa HOM05D000111 ORTHO05D001334 1.2e-08 63.9 120 35.8
EL10Ac7g16589 Beta vulgaris HOM05D000111 ORTHO05D001334 1.6e-08 63.5 30 83.3
A09p65350 Brassica napus HOM05D000111 ORTHO05D001334 1.6e-08 63.5 88 37.5
BraA09t41881Z Brassica rapa HOM05D000111 ORTHO05D001334 1.6e-08 63.5 88 37.5
vmacro22619 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 1.6e-08 63.5 125 35.2
Nitab4.5_0002270g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.1e-08 63.2 55 60.0
Rhsim02G0222300 Rhododendron simsii HOM05D000111 ORTHO05D001334 2.1e-08 63.2 113 35.4
THA.LOC104814340 Tarenaya hassleriana HOM05D000111 ORTHO05D001334 2.1e-08 63.2 110 36.4
GSVIVG01019797001 Vitis vinifera HOM05D000111 ORTHO05D001334 2.1e-08 63.2 30 80.0
TWI81G0831 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 2.7e-08 62.8 115 36.5
vmacro11022 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 2.7e-08 62.8 91 40.7
CANSAT80G1026 Cannabis sativa HOM05D000111 ORTHO05D001334 3.6e-08 62.4 146 34.9
Eucgr.E00563 Eucalyptus grandis HOM05D000111 ORTHO05D001334 3.6e-08 62.4 90 36.7
Hund11494 Selenicereus undatus HOM05D000111 ORTHO05D001334 4.7e-08 62.0 116 32.8
TAR383G0372 Trochodendron aralioides HOM05D000111 ORTHO05D001334 4.7e-08 62.0 112 34.8
vmacro11295 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 4.7e-08 62.0 29 82.8
vmacro08453 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 6.1e-08 61.6 113 36.3
TAR383G0060 Trochodendron aralioides HOM05D000111 ORTHO05D001475 8.0e-08 61.2 112 33.9
EL10Ac7g16581 Beta vulgaris HOM05D000111 ORTHO05D001334 1.0e-07 60.8 30 76.7
BcaC07g41864 Brassica carinata HOM05D000111 ORTHO05D001334 1.0e-07 60.8 112 32.1
C08p49310 Brassica napus HOM05D000111 ORTHO05D001334 1.0e-07 60.8 112 32.1
BolC8t52468H Brassica oleracea HOM05D000111 ORTHO05D001334 1.0e-07 60.8 112 32.1
Thhalv10029495m.g Eutrema salsugineum HOM05D000111 ORTHO05D001334 1.0e-07 60.8 30 73.3
vmacro11287 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 1.0e-07 60.8 133 33.1
AUR62023844 Chenopodium quinoa HOM05D000111 ORTHO05D001334 1.4e-07 60.5 41 61.0
TAR383G0880 Trochodendron aralioides HOM05D000111 ORTHO05D001475 1.4e-07 60.5 112 33.0
vmacro11298 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 1.4e-07 60.5 29 79.3
AUR62017292 Chenopodium quinoa HOM05D000111 ORTHO05D001334 1.8e-07 60.1 118 33.9
Nitab4.5_0026316g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.8e-07 60.1 49 61.2
PSO339G3530 Papaver somniferum HOM05D000111 ORTHO05D001475 1.8e-07 60.1 89 34.8
Solyc09g098470.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.8e-07 60.1 30 73.3
TAR383G0905 Trochodendron aralioides HOM05D000111 ORTHO05D000134 1.8e-07 60.1 94 35.1
EL10Ac7g16584 Beta vulgaris HOM05D000111 ORTHO05D001334 2.3e-07 59.7 112 33.9
CANSAT80G2802 Cannabis sativa HOM05D000111 ORTHO05D001334 2.3e-07 59.7 117 34.2
Nitab4.5_0001356g0180 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.3e-07 59.7 46 69.6
PSO339G1721 Papaver somniferum HOM05D000111 ORTHO05D001475 2.3e-07 59.7 120 32.5
PSO478G5308 Papaver somniferum HOM05D000111 ORTHO05D001475 2.3e-07 59.7 84 36.9
PSO675G1554 Papaver somniferum HOM05D000111 ORTHO05D001475 2.3e-07 59.7 99 33.3
Hma1.2p1_0208F.1_g088240 Hydrangea macrophylla HOM05D000111 ORTHO05D001334 3.0e-07 59.3 110 32.7
PSO801G0636 Papaver somniferum HOM05D000111 ORTHO05D001334 3.0e-07 59.3 90 35.6
Solyc07g061715.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 3.0e-07 59.3 30 76.7
TAR383G0784 Trochodendron aralioides HOM05D000111 ORTHO05D001475 3.0e-07 59.3 112 33.0
TAR664G0002 Trochodendron aralioides HOM05D000111 ORTHO05D001475 3.0e-07 59.3 112 33.0
Ah.12g057330 Amaranthus hybridus HOM05D000111 ORTHO05D001334 4.0e-07 58.9 30 70.0
AL6G46442 Arabidopsis lyrata HOM05D000111 ORTHO05D001334 4.0e-07 58.9 93 36.6
Eucgr.E00564 Eucalyptus grandis HOM05D000111 ORTHO05D001334 4.0e-07 58.9 29 75.9
Sopen09g036390 Solanum pennellii HOM05D000253 ORTHO05D000149 4.0e-07 58.9 30 70.0
TAR629G1416 Trochodendron aralioides HOM05D000111 ORTHO05D000134 4.0e-07 58.9 112 29.5
Thhalv10026973m.g Eutrema salsugineum HOM05D000111 ORTHO05D001334 5.2e-07 58.5 117 31.6
Nitab4.5_0014300g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 5.2e-07 58.5 121 35.5
Peaxi162Scf01206g00025 Petunia axillaris HOM05D000111 ORTHO05D001334 5.2e-07 58.5 30 70.0
EL10Ac7g16588 Beta vulgaris HOM05D000111 ORTHO05D001334 6.7e-07 58.2 30 73.3
Nitab4.5_0001356g0160 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.2e-06 57.4 46 67.4
PSO017G5718 Papaver somniferum HOM05D000111 ORTHO05D001475 1.2e-06 57.4 110 32.7
PSO478G1401 Papaver somniferum HOM05D000111 ORTHO05D001334 1.2e-06 57.4 109 31.2
TAR629G2288 Trochodendron aralioides HOM05D000111 ORTHO05D001334 1.2e-06 57.4 100 31.0
AT2G24950 Arabidopsis thaliana HOM05D000111 ORTHO05D001334 1.5e-06 57.0 123 31.7
Nitab4.5_0000528g0050 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.5e-06 57.0 28 71.4
PSO801G0684 Papaver somniferum HOM05D000111 ORTHO05D001334 1.5e-06 57.0 87 35.6
TAR383G0571 Trochodendron aralioides HOM05D000111 ORTHO05D001475 1.5e-06 57.0 91 34.1
TAR623G0920 Trochodendron aralioides HOM05D000111 ORTHO05D001475 2.0e-06 56.6 107 35.5
TWI81G0176 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 2.6e-06 56.2 27 77.8
GSVIVG01028932001 Vitis vinifera HOM05D000111 ORTHO05D000134 2.6e-06 56.2 104 34.6
PSO349G0255 Papaver somniferum HOM05D000111 ORTHO05D001475 3.3e-06 55.8 113 35.4
PSO478G0890 Papaver somniferum HOM05D000111 ORTHO05D001475 3.3e-06 55.8 94 31.9
Sp7g13240 Schrenkiella parvula HOM05D000111 ORTHO05D001334 3.3e-06 55.8 97 33.0
AT1G10190 Arabidopsis thaliana HOM05D000111 ORTHO05D001334 4.4e-06 55.5 99 34.3
Nitab4.5_0007246g0030 Nicotiana tabacum HOM05D000111 ORTHO05D001334 4.4e-06 55.5 45 64.4
AT4G15050 Arabidopsis thaliana HOM05D000111 ORTHO05D001334 5.7e-06 55.1 110 33.6
TAR375G1024 Trochodendron aralioides HOM05D000111 ORTHO05D000134 5.7e-06 55.1 114 33.3
GSVIVG01026925001 Vitis vinifera HOM05D000111 ORTHO05D001475 5.7e-06 55.1 101 32.7
Nitab4.5_0000045g0310 Nicotiana tabacum HOM05D000111 ORTHO05D001334 7.5e-06 54.7 49 57.1
PSO170G1385 Papaver somniferum HOM05D000111 ORTHO05D001475 7.5e-06 54.7 45 60.0
Peaxi162Scf00002g01816 Petunia axillaris HOM05D000111 ORTHO05D001334 7.5e-06 54.7 49 59.2
Peaxi162Scf01409g00017 Petunia axillaris HOM05D000111 ORTHO05D001334 7.5e-06 54.7 43 62.8
Carub.0002s0474 Capsella rubella HOM05D000111 ORTHO05D001334 9.7e-06 54.3 111 32.4
Psat5g037360 Pisum sativum HOM05D000111 ORTHO05D000134 9.7e-06 54.3 111 32.4
QL02p001729 Quercus lobata HOM05D000111 ORTHO05D000134 9.7e-06 54.3 132 32.6


User provided reference genes

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